Coturnix japonica (Japanese quail): 107315885
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Entry
107315885 CDS
T04297
Symbol
POLR3A
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03020
RNA polymerase
cjo04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107315885 (POLR3A)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
107315885 (POLR3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cjo03021
]
107315885 (POLR3A)
Enzymes [BR:
cjo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107315885 (POLR3A)
Transcription machinery [BR:
cjo03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
107315885 (POLR3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF2120
Motif
Other DBs
NCBI-GeneID:
107315885
NCBI-ProteinID:
XP_015722278
UniProt:
A0A8C2TIK8
LinkDB
All DBs
Position
6:10866181..10896623
Genome browser
AA seq
1402 aa
AA seq
DB search
MVKEQFRESDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNNHAPLQYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFKAVIGILQMICKTCCCIMLSVE
EKKQFLDYLKRPGLTYLQKRGLKKKVSEKCRKKNTCPYCGAFNGTVKKCGLLKIIHEKYK
TNKKVVDPVVSTFLQSFETAIEYNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDIPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPIHVAKILTFPEKVNKANINFMRKLVRNGPDVHPGANF
IQQRHTQMKRFLKYGNREKMAQELKFGDIVERHLIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPAILKPVTLWTGKQV
FSLILKPSDDCPVKANLRTKGKQYCGKGEDLCYNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKHELLHAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYPCRSEPALSKNELVLTSESIMKKNEFLC
CRDSFLQTLTETGYEKYNEEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITP
TQLEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKAISTPIITAQLDKDDDPDFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICISKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYV
LQSLKEELPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSS
NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK
ESTPPKRPLVFDNNEFHIPIVT
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgcgagagcgatgtggccaagaaaataagccacatctgcttc
gggatgaaatccccagaggagatgcggcagcaggcccacatccaagtggtcagcaagaat
ctgtacagccaggacaacaaccacgccccgctgcagtacggtgtgctcgaccaccgcatg
ggaacaagtgaaaaagatcgtccctgtgaaacctgtggaaaaaacctggctgactgtttg
ggccactatgggtacattgacttggaactgccgtgttttcatgttggatacttcaaagct
gtgattggcatcttgcagatgatctgcaaaacctgttgctgtatcatgctatcagtagaa
gaaaaaaaacagtttttggattacttgaagcggccaggccttacttatcttcagaagaga
gggctgaaaaagaaggtgtctgaaaagtgtcggaagaaaaacacttgtccttactgtggt
gcctttaatggaactgtgaagaagtgtggcttgctgaaaataatacatgaaaagtacaaa
accaataagaaggttgtcgatccagtagtatccacttttctgcagtcctttgaaaccgcc
atagaatataacaaagaagtggagcccttactgggaagagctcaggaaaacttgaatcca
ttagtagtattgaacctgtttaaaagaatcccggcagaagatatccctctgcttctgatg
aacccagaggcaggtaagccttcagatttgatcctcacccgacttctagtgcctccgctg
tgtatcagaccctctgttgtgagtgatttgaagtctggcaccaacgaagatgacttgaca
atgaagctgacagagatcattttcctcaatgatgtaataaaaaagcacaggatatcagga
gccaaaactcagatgattatggaagactgggacttccttcaattgcagtgtgccctttac
atcaacagtgagctttctggaattcctctgaacatggcacctaaaaagtggactagaggc
tttgtccagagacttaagggaaagcaaggtcggtttagaggcaatctgtctggaaagcga
gtggatttctctggcagaacggtcatttcccctgatcctaacttacgaatagatgaagta
gcagtgcctattcatgttgctaaaatactaacttttcctgaaaaggtgaacaaagcaaat
attaattttatgaggaaacttgtccgaaatggtcctgatgttcatcctggagccaacttc
attcagcaaaggcacacacaaatgaaaagatttttgaaatatggaaaccgagaaaagatg
gcgcaggagctgaagtttggtgatattgtggaacggcatcttatagatggtgatattgtc
ctgtttaaccgacagccctctcttcataagctgagcattatggctcacattgctagagta
aaaccccataggacattcagatttaatgaatgtgtgtgtacaccatacaatgcagacttt
gatggagatgagatgaaccttcaccttcctcagacagaagaagcaaaggcagaagcactt
gttttaatggggactaaagcaaatttggtaacaccaaggaatggagaacccctaattgct
gctattcaagatttcttaacaggtgcctatcttcttacactaaaagatacattttttgat
cgagcaaaagcttgtcaaatcattgcttctattctggttggcaaggatgaaaaaattaaa
gttcgtcttcctcccccagcaattctgaagcctgtaacactctggacaggaaagcaggtt
ttcagcctcattctcaaacccagtgatgactgtcccgtgaaagccaatctgcgaaccaag
ggcaagcagtactgtggcaaaggggaagatctgtgttacaatgactcttatgtcacaatt
caaaatagtgagttgatgagtggcagtatggacaaaggaaccctaggttctggatcaaaa
aataatatcttctacattttgctgagagactggggacaagtggaagctgcagatgccatg
tcaaggctagccagacttgcacctgtctatctttctaatcgtggcttttcaattggaatt
ggtgatgttacaccaggccagggcctgctaaaagctaagcatgaactgctgcatgctggc
tataagaaatgtgatgaatacattgaagcactgaatactggcaagctacagcagcagcct
ggttgtactgcagaagagacactagaggccttaatacttaaagaactctctgttatcaga
gatcatgctggcagtgcctgtctcagagagctggacaagagcaacagtccccttatcatg
gctctttgtggttctaaaggttccttcattaatatatcccagatgattgcatgtgtgggt
caacaggctatcagtgggtcccgagttcctgatggatttgaaaacaggtctttgcctcat
tttgagaagcattctaagcttccagcagcaaaaggctttgttgctaacagcttctattcg
gggttgactcccactgaatttttttttcacactatggctggtcgagaaggtctggttgac
actgctgtaaaaacagctgaaactggatatatgcagaggcggctggtaaaatcccttgaa
gatctttgttcacagtatgatctgacagtcagaagttctactggtgatattattcagttt
atttatggaggagatggtttggatcctgcagcaatggaagggaaggatgaaccactggag
tttaagcgagttctagacaatatcagagctgtatatccatgccgaagtgaaccagccctt
agtaaaaatgaattggtgttaacatctgaatctatcatgaagaagaatgaatttctttgc
tgccgagacagttttctgcagacattaactgaaacaggttatgaaaaatataatgaggaa
ataaaaaaattcatcaaaggtgtttctgagaagataaaaaaaactagggacaagtatggt
atcaatgacaatggcacaacagagccacgggttttatatcagttggataggattactcca
acgcaactggagaagtttctagagacctgtagggacaaatacatgagggcacagatggag
cctggttctgcagtaggagctctttgtgcacagagcatcggtgagcctggcacacagatg
actctgaagactttccattttgccggggttgcttcaatgaacattactttgggtgtgcca
agaatcaaggaaattattaatgcttcaaaagcaattagcacacctattataacagcacag
ttggacaaagatgatgatcctgattttgcccgactggtgaaaggaagaattgagaaaact
ttgctaggagagatatcggaatatattgaagaagtgtttcttccagatgattgtttcatc
ttagtgaagctgtctttggagcgcattagactactgagattagaggtgaatgcagaaact
gtgcgctactcaatttgcatatctaaactcagagtgaagcctggagatgttgctgtccat
ggagaagcagttgtatgtgtgacccctcgtgaaaatagcaagagttcgatgtattatgta
ttgcagtccctgaaagaagaactaccaaaggttgtagtgcaaggtataccagaggtttcc
cgagctgtcatccacattgatgaacaaagtggtaaagaaaaatacaaacttctagttgaa
ggtgataacctgcgagctgttatggctactcatggagtgaaaggaacaaaaacatcctct
aacaacacttacgaggtagagaagacactaggaattgaagctgctcgaaccaccattatc
aatgagattcaatatacaatggtgaaccacggtatgagcattgacaggaggcatgttatg
ttgctgtctgatcttatgacttacaagggtgaagtactgggcattactaggtttggactg
gcaaaaatgaaagaaagtgtgttgatgctggcttcttttgagaagactgcagaccatctg
tttgatgctgcctactttggacagaaggactctgtttgtggtgtttccgagtgcatcatc
atgggaatcccaatgaatattggaacaggactttttaagcttttgcacaaagcagacaaa
gaatcaacccctcctaaaaggcctctggtatttgataataatgagtttcatatccccatt
gtcacgtaa
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integrated database retrieval system
