Coturnix japonica (Japanese quail): 107321672
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Entry
107321672 CDS
T04297
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo04020
Calcium signaling pathway
cjo04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107321672 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
107321672 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cjo04040
]
107321672 (GRIN1)
Ion channels [BR:
cjo04040
]
Ligand-gated channels
Glutamate (ionotropic)
107321672 (GRIN1)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
DUF6724
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
107321672
NCBI-ProteinID:
XP_015734303
UniProt:
A0A8C2TY56
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Position
17:complement(523237..552524)
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AA seq
1070 aa
AA seq
DB search
MSAMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEERESKSKKRNYENLDQLSYDNKRGPKAEKVLQFDPGTKNVTSLLLEAKELEARVI
ILSASEDDAATVYRSAAMLNMTGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESA
HISDAVAVVAQAVHDLFEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVE
FNEDGDRKFANYSIMNLQNRKLVQVGIYNGSNVLTNDRKIIWPGGETEKPQGYQMSTKLK
IVTIHQEPFVYVKPTQADGTCREEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCID
LLIRLAGVMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELST
MYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIG
MRKDSPWKQNVSLAILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVA
GGIVAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQRELRRRSKCIPEHALRTS
GIHFGYPRAVAEPDLVTPSPVGKVTLIGTKAIGEESLSAPAAERGRSPRLAAPAPWRLVL
PACANQDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTPCRMVPQECQRDRLAPW
SQDSPGKLPPHSERPSAHHHPSCTASPRHIIPTAPGGDACVPHRQLLQLE
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccatgcggctgctgctgctcgctctgctcttctcatcctccttcgcccgcgcc
ggctgcgaccccaagatcgtcaatatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggccaacaagcggcacggcacctggaagctgcagctc
aacgccacctcggtcacgcacaaacccaacgccattcagatggctctctccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcaccctcctgctcccaacgat
cacctaacaccaacacccgtatcatacacagctggcttctacaggatccctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtcctttttgcgcacg
gtcccaccatactctcaccaggccaacgtctggtttgagatgatgagagtcttcaactgg
aatcacgtcattctgatagtcagcgacgaccacgaaggtcgtgctgcacaaaagaagctg
gagaccctcttggaggagagagagtccaagagtaaaaaaaggaactatgaaaacctcgac
caactttcctatgacaacaagcgaggacccaaggctgagaaagtgctgcagtttgacccc
gggaccaaaaatgtgacatcgctgctgctggaggcgaaagagctggaggctcgtgtcatc
atcctctccgccagtgaggatgatgcggcaacggtgtacagatcagcagccatgctcaat
atgacgggctccggctacgtgtggctggtgggggaacgggagatttcgggcaatgccctg
cgctatgcccctgatggagtcatcggcttacagctcatcaatgggaaaaatgagtcagcc
cacataagcgatgctgtggcggtggtggcccaggctgtgcacgacttgtttgagaaggag
aacatcaccgacccaccacggggctgtgtgggcaacaccaacatctggaagacggggccc
cttttcaagagggtgttaatgtcctccaagtactcggagggtgtcaccggacgggtagaa
ttcaatgaggacggggacaggaagtttgccaattacagcatcatgaacctgcagaaccgc
aaactggtccaggttgggatttacaatggtagcaatgtcttgaccaacgaccggaagata
atctggccagggggagagactgagaaaccacaaggctatcagatgtcaaccaaactgaag
atcgtaacaattcaccaagagccctttgtgtatgtgaagcccacgcaagcagatgggacg
tgcagggaggaattcaccatcaatggtgaccctgtcaaaaaggtcttttgcacagggccc
aacgagaccatcccaggccggcccaccgtggcactgtgttgctatggcttctgcatcgac
ctgctcatccgcctggctggtgtgatgaatttcacctacgaggttcacctggtggctgat
ggtaaatttggtacccaagagcgggtaaacaacagcaacaagaaggagtggaatgggatg
atgggggagttgctgagtggccaggctgatatgattgtggctcccctcaccatcaacaat
gagcgggcacagtacatcgagttctccaagcccttcaagtaccagggtctcaccatcctt
gtgaagaaggaaattccccgcagcaccctggactcgttcatgcagcccttccagagtaca
ctgtggcttctggtggggctgtctgtgcatgtggtggcagtgatgctataccttctagat
cgattcagcccatttggacggttcaaagtgaacagcgaggaggaggaggaagatgccctg
acactctcctcagccatgtggttctcctggggagtcctgctgaactccggcattggagaa
ggtgctccccggagtttctctgctcgtattctgggcatggtgtgggctggcttcgctatg
atcattgtggcttcttacactgccaacctggctgccttcctggtgttggaccgtcctgag
gagagaattacaggcatcaacgacccccggctgcgcaacccctccgataagttcatttat
gccacggtgaagcagagctcggtggacatctacttccgacggcaggtggagctgagcacc
atgtaccggcacatggagaaacacaactatgagagcgcagccgaagccatccaggctgtg
agagacaataagctccacgccttcatctgggactcagcagtgctggagtttgaagcctca
cagaagtgtgacctggtgacgacaggggaacttttcttccgctccggcttcgggatcggg
atgcgcaaggacagcccatggaagcagaatgtctcgctggccatcctcaagtcccacgag
aacggcttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgt
agcaatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggct
ggaggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataag
gacgcgcggaggaagcagatgcagctggcgtttgcggccgttaatgtgtggaggaaaaac
ctgcagagagaactgagaaggaggagcaaatgtatccccgagcatgctctacgcaccagc
gggatacattttggttacccccgtgcggtagcagagccagacctggtcactccgtccccc
gtcggcaaggtcacactcattggcacgaaagcaattggggaggaatcgttgtcagcgccc
gccgccgagcgcggccggtccccacggctggctgcccccgcaccgtggcggctggtgctc
ccagcctgcgccaaccaggatagaaaaagtggtagagcagaacctgaccctaaaaagaaa
gccacttttaggtccatcacctccaccctggcctccagcttcaagagacgtaggtcctcc
aaggatacgccctgcagaatggtccctcaggagtgccagagagacaggctggcaccatgg
agccaagacagccccgggaagctgccaccccactctgaacgtcctagcgcccaccatcac
ccgagctgcacagcctctccgcggcacatcatccccaccgccccaggaggagatgcatgt
gttccccataggcagctcctgcaactcgaatag
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