Caldicellulosiruptor kronotskyensis: Calkro_0508
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Entry
Calkro_0508 CDS
T01357
Name
(GenBank) hypothetical protein
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
ckn
Caldicellulosiruptor kronotskyensis
Pathway
ckn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ckn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Calkro_0508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ckn03021
]
Calkro_0508
03400 DNA repair and recombination proteins [BR:
ckn03400
]
Calkro_0508
Transcription machinery [BR:
ckn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Calkro_0508
DNA repair and recombination proteins [BR:
ckn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Calkro_0508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-ACC
ZNF512_C2H2
zinc_ribbon_4
Lar_restr_allev
zinc_ribbon_5
PTRF_SDPR
Snapin_Pallidin
HypA
C1_4
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
ADQ45408
UniProt:
E4SEC1
LinkDB
All DBs
Position
625712..626182
Genome browser
AA seq
156 aa
AA seq
DB search
MENLYEKVAYLRGLAEGLGVNEDSKEGRLLLSIIDVLDEFADAINELDVKQAELEDVVDS
IDEDLEKLEDEVYENYDEDYDDYYDDEDDEDLVEVTCPNCKVTFYLEEDEYLNEDEIECP
NCNEIIYLDELEEEFDDEEDDDEYEDEVDDEDKKDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttatatgaaaaggttgcatacttgagagggcttgcagagggtctgggcgta
aatgaggattcaaaagaaggaaggcttcttctgagtatcattgatgtgcttgacgagttt
gcagatgcaataaatgagcttgacgtcaagcaagcagagcttgaagatgttgttgattca
attgacgaggatttggaaaagttagaagatgaagtgtatgaaaattatgatgaggattat
gatgactactacgatgatgaagatgacgaagacttggtggaagtgacctgtccaaactgc
aaggtaacattttatttagaagaagacgagtacttaaacgaggacgagattgaatgccct
aactgcaacgaaataatatatcttgacgaacttgaagaagagtttgacgatgaagaagac
gatgatgagtatgaagacgaagtagatgatgaggacaaaaaagataaataa
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