Citrobacter koseri: CKO_02042 Help Entry CKO_02042         CDS       T00592                                  Name (GenBank) hypothetical protein   KO K13821   RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] Organism cko  Citrobacter koseri Pathway cko00250   Alanine, aspartate and glutamate metabolism cko00330   Arginine and proline metabolism cko01100   Metabolic pathways cko01110   Biosynthesis of secondary metabolites Module cko_M00970   Proline degradation, proline => glutamate Brite KEGG Orthology (KO) [BR:cko00001]  09100 Metabolism   09105 Amino acid metabolism    00250 Alanine, aspartate and glutamate metabolism     CKO_02042    00330 Arginine and proline metabolism     CKO_02042  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:cko03000]     CKO_02042 Enzymes [BR:cko01000]  1. Oxidoreductases   1.2  Acting on the aldehyde or oxo group of donors    1.2.1  With NAD+ or NADP+ as acceptor     1.2.1.88  L-glutamate gamma-semialdehyde dehydrogenase      CKO_02042   1.5  Acting on the CH-NH group of donors    1.5.5  With a quinone or similar compound as acceptor     1.5.5.2  proline dehydrogenase      CKO_02042 Transcription factors [BR:cko03000]  Prokaryotic type   Ribbon-helix-helix    Other families     CKO_02042 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Aldedh Pro_dh Pro_dh-DNA_bdg PutA_1st PRODH Motif Other DBs NCBI-ProteinID:  ABV13167 UniProt:  A8AI55 LinkDB All DBs Position 1893016..1896978 Genome browser AA seq 1320 aa AA seqDB search MGTTTMGVKLDDATRERIKTAATRIDRTPHWLIKQAIFNYLEKLESDEALPELPALLAGA ANEGDESTAQQEENHQPFLEFAEQILPQSVSRAAITAAYRRAETDAVPMLMEQARLPQPV AEQAHKLAYQLAEKLRNQKTASGRAGMVQGLLQEFSLSSQEGVALMCLAEALLRIPDKAT RDALIRDKISNGNWQSHIGRSPSLFVNAATWGLLFTGKLVSTHNEASLSRSLNRIIGKSG EPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLEDKGFRYSYDMLGEAALTAADAQAY MVSYQQAIHAIGKASNGRGIYEGPGISIKLSALHPRYSRAQYDRVMEELYPRLKSLTLLA RQYDIGINIDAEEADRLEISLDLLEKLCFEPELAGWNGIGFVIQAYQKRCPFVIDYLIDL ATRSRRRLMIRLVKGAYWDSEIKRAQMDGLEGYPVYTRKVYTDVSYLACAKKLLAVPNLI YPQFATHNAHTLAAIYQLAGQNYYPGQYEFQCLHGMGEPLYEQVTGKVADGKLNRPCRIY APVGTHETLLAYLVRRLLENGANTSFVNRIADATLPLDELVADPVEAVEKLAQQEGQTGL PHPKIPLPRDLYGQGRENSGGLDLANEHRLASLSSALLNNALQKWQAKPMLEQPVADGEM TPVINPAEPKDIVGYVREASAADVEQALQNAVNNAPIWFATPPQERAAILQRAAVLMEGQ MQQLIGILVREAGKTFSNAIAEVREAVDFLHYYAGQVRDDFDNETHRPLGPVVCISPWNF PLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGA QLTSDERVRGVMFTGSTEVASLLQRNIATRLDAQGRPIPLIAETGGMNAMIVDSSALTEQ VVVDVLASAFDSAGQRCSALRILCLQDDIADHTLKMLRGAMAECRMGNPGRLTTDIGPVI DNEAKTNIERHIQAMRTKGRPVFQAVRENSDDAREWQTGTFVPPTLIELESFDELQKEIF GPVLHVVRYTRNHLPELIAQINASGYGLTLGVHTRIDETIAQVTGSAHAGNLYVNRNMVG AVVGVQPFGGEGLSGTGPKAGGPLYLYRLLANRPENALGITLARQDADYPVDAQLKAALT QPLDALIGWAADRPALHTLCQQFSELAQTGTQRLLPGPTGERNTWTLLPRERVLCLADDE QDALVQVAAVTAVGSLILWPDDAFHRELAKRLPAAVCERIQFAKADTLTSQPFDAVIFHG DSDQLRALCEAVAARDGAIVSVQGFARGETNILLERLYIERSLSVNTAAAGGNASLMTIG NT seq 3963 nt NT seq  +upstreamnt  +downstreamnt atgggaaccaccacgatgggggttaagctggacgacgcgacgcgcgaacgtattaaaaca gcagcaacacgaattgatcgcaccccacactggctgatcaaacaggcaatatttaattat ctggaaaaactggaaagcgacgaggcgttaccggagttgcccgccctgctggctggcgcc gccaatgaaggcgatgagtcaaccgcacagcaggaagaaaaccaccagcctttccttgag tttgccgagcagatcctgcctcagtcggtctcccgcgccgcgattaccgcagcttaccgt cgcgccgaaaccgatgcggtgccgatgttaatggagcaggcgcgtctgccgcagccggtg gccgaacaagcccacaagctggcctatcaactggcggagaaactgcgtaaccagaaaacg gccagcggccgcgccgggatggtgcaggggctgttgcaggagttctccctctcctcacag gaaggcgtcgcgctgatgtgccttgcagaagcgctgctgcgtatcccggataaagcgacg cgtgacgcgctcatccgcgacaaaatcagcaacggcaactggcagtcgcatattggccgc agcccgtcgctgtttgttaatgccgccacctggggtctgttgtttaccggcaagctggtt tctactcacaacgaagccagtctctctcgctcgctgaaccggattatcggtaagagcggc gagccgctgatccgcaaaggtgtggacatggcaatgcgcctgatgggcgagcagttcgtc actggcgaaaccatcgccgaagcgctggcgaatgcacgtaagctggaagacaagggcttt cgctactcctacgatatgttaggcgaagcggcgctgaccgccgccgatgcgcaggcttat atggtttcgtatcagcaggctattcacgccattggcaaagcgtctaacggacgcggaatt tatgaagggccggggatctccatcaagctttccgccctgcacccgcgctacagccgcgcg cagtatgaccgtgtgatggaggagctgtatccgcgcctgaaatccctgacgctgctggcg cgtcagtatgatatcggcatcaacatcgacgccgaagaagccgaccgtctggaaatctcc ctcgacctgctggaaaaactttgttttgagccggaactggctggctggaacggcatcggt ttcgtgattcaggcttatcagaaacgctgcccgtttgtgattgattatctgatcgatctc gccacgcgcagccgtcgccgcctgatgatccgcctggtgaaaggcgcgtactgggacagt gaaatcaaacgcgcccaaatggacggactggagggatacccggtttacacccgcaaggtc tataccgacgtttcttatctggcctgcgcgaaaaaactgctcgccgtaccgaatctgatt tacccgcagtttgcgacccataacgcccatactctggcggcgatttatcaactggcgggg cagaactactatccgggccagtatgaattccagtgtctgcacggcatgggcgaaccgctg tacgagcaggtcaccggtaaagtggcggatggcaaactcaaccgtccgtgtcgtatttat gccccggtcggcacgcatgaaacgctgctggcgtatctggtgcgccgcctgctggaaaac ggcgccaacacctccttcgttaaccgtattgccgacgccacgctgccgctggatgaactg gtcgccgacccggtggaggccgtggaaaaactggcgcagcaagaagggcaaaccggcttg ccgcatccgaaaatcccgctgcctcgcgacctctacggacaaggccgggaaaactccggc gggttggatctggctaacgaacaccgtctggcttccctctcctccgccctgttgaacaat gcgctgcaaaaatggcaggccaaaccgatgctggaacagccggtcgctgacggagagatg acgccggtgatcaacccggcagagccgaaagacatcgtcggctacgtgcgcgaagccagc gctgcggacgttgaacaagcgctgcaaaacgcggttaacaacgcccctatctggtttgcc acgccaccgcaggaacgcgccgccatcctgcaacgcgcagcggtattaatggaaggccaa atgcagcagctgattggcattctggttcgtgaagccgggaaaaccttcagtaatgctatt gcagaagtacgcgaagcggtggatttcctccactactacgccgggcaggtacgcgatgac tttgataacgaaacgcatcgtcctttaggcccggtcgtctgtatcagcccgtggaacttc ccgctggccatcttcaccggacaaattgccgctgcgctggcggcgggcaacagcgtcctg gcgaaaccggcggaacaaacgccgctgattgccgcccagggcatcgccatcttactggaa gccggtgttccgccgggcgtagtgcagttgctgcccggccagggtgaaaccgttggggcg cagttaacctccgacgagcgcgtacgcggcgtgatgtttaccggctcgaccgaagtcgcc agcttattgcagcgtaatatcgccacccgtctggatgcgcagggtcgcccgattccgctg attgcggaaaccggcgggatgaacgccatgatcgtggactcctccgcccttaccgaacaa gtggttgtggatgtgctggcatctgcgtttgacagtgccgggcagcgctgctcggcgctg cgcatactgtgcttgcaggatgatatcgccgaccacaccctgaaaatgctgcgcggggca atggcggaatgccgcatgggcaatccgggccgtctgaccaccgacattggcccggttatc gataacgaagccaaaaccaatattgagcgccatattcaggcgatgcgtacgaaaggtcgt ccggtattccaggccgtacgtgaaaacagcgatgatgcgcgcgaatggcaaaccggcacc ttcgttccgccaacgctgattgaactggaaagttttgatgagctgcaaaaagagatcttc gggccggtgctgcatgtggtgcgttacacgcgaaaccaccttcccgaactgattgcgcag atcaacgcctccggctacggtctgacgctgggcgtacatacccgaattgacgagaccatt gcgcaggtcaccggttcagcgcacgcaggcaacctgtacgtcaaccgtaatatggtcggc gcggtcgtgggcgtccagccattcggcggcgaaggcttgtccggcaccgggccgaaagcg ggcggtccgctctatctctaccgtctgttggcaaatcgcccggaaaacgcgctgggcatt acgcttgcccgtcaggatgcggactacccggtggatgcccagcttaaagccgcgctgact cagccgcttgacgcgctgatcgggtgggcggcggatcgcccggccttgcatacgctctgt cagcagtttagcgagctggcgcagaccggaacccagcgtctgctgcctggccctaccggt gagcgcaatacctggacgttactgccgcgtgaacgcgtattgtgtctggctgatgacgag caggacgctctggtgcaggtcgccgccgtgacagcggtcgggagtctgattttgtggccg gacgatgccttccaccgcgaactggcgaagcgcctgcccgctgcggtttgtgaacgtatt cagtttgcgaaagcggacacgctgacttcgcagccgttcgatgcggtgatcttccacggc gattccgatcagctacgggcgctgtgcgaggcggtagccgcccgtgacggcgcgatcgtg tcggtacagggctttgcccgtggtgaaaccaatatcctgctggagcgtctgtatattgag cgctcgctcagcgttaacaccgctgcggcaggtggtaacgccagcctgatgacaattggt taa

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