Chitinimonas koreensis: H9L41_13170
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Entry
H9L41_13170 CDS
T08620
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cks
Chitinimonas koreensis
Brite
KEGG Orthology (KO) [BR:
cks00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cks03009
]
H9L41_13170 (rimO)
Enzymes [BR:
cks01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H9L41_13170 (rimO)
Ribosome biogenesis [BR:
cks03009
]
Prokaryotic type
ribosomal protein modification factors
H9L41_13170 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
DUF5666
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QNM94874
LinkDB
All DBs
Position
complement(3149448..3150767)
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AA seq
439 aa
AA seq
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MNKIPSIGMVSLGCPKALVDSEQILTQLRAEGYAISPSYQDADLVVVNTCGFIDSAVTES
LDAIGEALNENGKVIVTGCLGAKDGGNQIRDVHPSVLAVTGPHATQEVMAAVHQHLPKPH
DPFVDLVPPQGVKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLDSRPIHEVLKEAENLA
RAGVKELLVISQDTSAYGVDVKYKTGFHNGRPVKTRMTELCRELGDMGIWVRLHYVYPYP
HVDEVIELMAAGKVLPYLDIPFQHASHSVLKAMKRPANAENVLKRLEKWRSVCPDIAIRS
TFITGFPGETEADFQTLLDFLDEAQLDRVGCFAYSPVDGATANDLPDHVPAEIAEERKAR
FMEKQAAISAAKLAAKIGRRLTVLVDEVDEEGVAARSYADAPEIDGMVYVENAAGLKVGD
FVEVEVVDADEYDLWAARV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagattcccagtataggtatggtatcgctcgggtgcccgaaagccttggtggac
tccgagcagatcctcacccagctgcgcgccgagggttatgcgatctcgccgagctaccag
gacgccgacctggtggtggtcaatacctgcggcttcatcgacagcgcggtgaccgagtcg
ctcgacgccatcggcgaggcgctcaacgagaacggcaaggtgatcgtgaccggttgcctg
ggggccaaggacggcggcaaccagatccgcgacgtgcatccgtcggtgctggcggtgacc
ggcccgcacgcgacgcaggaagtgatggccgcggtgcaccagcacctgcccaagccgcac
gaccccttcgtcgacctggtgccgccgcagggcgtcaagctcacgcccaagcactacgcc
tacctgaagatttccgaaggctgcaatcaccgctgctcgttctgcatcatcccgtcgatg
cgcggcgacctcgattcgcggccgatccacgaagtgctcaaggaagccgagaacctggcg
cgcgccggcgtcaaggaactgctggtgatttcacaggacaccagcgcctacggcgtcgac
gtcaagtacaagaccggcttccacaacggccggccggtcaagacccgcatgaccgagctg
tgccgcgagctcggcgacatgggcatctgggtgcggctgcactacgtctacccgtatccg
cacgtcgacgaggtgatcgagctgatggccgccggcaaggtgctgccctatctcgacatc
ccgttccagcacgccagccattcggtgctcaaggccatgaagcggccggccaatgccgag
aacgtgctcaagcggctggagaagtggcgctccgtctgccccgacatcgcgatccgctcg
accttcatcaccggcttccccggcgagaccgaggccgacttccagaccctgctcgacttc
ctcgacgaggcccagctcgaccgcgtcggctgcttcgcctattcgccggtcgacggcgcc
accgccaacgacctgcccgaccacgtgccggccgagatcgccgaggaacgcaaggcgcgc
ttcatggaaaagcaggctgccatcagcgccgccaagctcgcggccaagatcggccgccgg
ctcaccgtgctggtcgacgaagtcgacgaggaaggcgtggccgcgcgcagctacgccgat
gcgcccgagatcgacggcatggtctatgtagagaatgcggccggcctcaaggtcggcgac
ttcgtcgaggtcgaagtcgtcgatgccgacgagtatgatttgtgggcggcaagagtgtaa
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