Caldicellulosiruptor acetigenus 6A: Calla_1361
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Entry
Calla_1361 CDS
T01600
Name
(GenBank) Ribosomal protein S12 methylthiotransferase rimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
clc
Caldicellulosiruptor acetigenus 6A
Brite
KEGG Orthology (KO) [BR:
clc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clc03009
]
Calla_1361
Enzymes [BR:
clc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Calla_1361
Ribosome biogenesis [BR:
clc03009
]
Prokaryotic type
ribosomal protein modification factors
Calla_1361
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GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AEM73980
UniProt:
G2PYD0
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All DBs
Position
complement(1433001..1434323)
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AA seq
440 aa
AA seq
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MIKVGFVSLGCNKNLVDSEIMMGACVKAGFEITSNAEDADVIVVNTCGFINDAKQESIDT
ILDMAEYKNKKCKFLIVTGCLTQRYKDEILEQMPEVDAILGVKEMLKLPEVIRGLYEGKQ
KIKMFDDATSFVYTSSMPRVIATPRYYAYIKIAEGCNNRCSYCSIPLIRGKYTSRPIEDI
VKEAEELAEKGYQEIVLTAQDTTKYGLDLYGKKMLPSLLEELEKIEKIKWIRFLYSYPED
VDENLIEVVKSSSKIVNYFDIPIQHINDRILKLMNRKTTKEGIKRLIEKIRRSFDEVVIR
TTVLVGFPTETDEEFEELCSFLRWAEFDRLGAFMYSQEEGTPASQLPQVDDEVKQRRYEK
VLNIQRKISKKQNKKRVGREYEVVIEAKDKNNFYIGRSQFEAPEVDGKVLVFSQNKLTAG
QFVKVKILDAFEYDLVGEII
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
ttgattaaggttgggtttgtctcgctgggatgtaataaaaaccttgttgacagtgaaata
atgatgggtgcatgtgtcaaggcaggatttgaaatcacctcaaatgcagaggatgctgat
gtaattgttgtaaacacatgtggttttataaacgatgcaaaacaggaatcaatagatacc
atattagatatggctgaatataagaacaaaaaatgcaagtttttgatagtgacagggtgt
ttgacgcaaagatacaaagatgagatattggaacagatgccagaggttgatgcaatactt
ggtgtgaaagagatgttaaaactacctgaggtaataagaggcttatatgagggtaaacag
aagataaaaatgtttgatgatgcaacttcgtttgtgtatacaagttcaatgccaagggtg
attgccacgcccagatactatgcctacataaagatagcagaagggtgcaacaacagatgt
tcttattgttccataccacttattagaggcaagtatacaagcaggcccattgaagatata
gtaaaggaagcagaagaattagcagaaaagggataccaggaaattgtcctcacagctcag
gatactacaaagtatggtttggatttgtatggcaagaagatgttaccctctttacttgaa
gagcttgaaaagattgaaaaaatcaagtggataagatttttgtactcttaccctgaggat
gtggatgaaaatcttatcgaggtggtaaaatcttcttctaagatagtaaactattttgac
attccaattcagcatataaatgatagaatattaaagctcatgaacagaaaaacaacaaaa
gaaggtataaagaggctaatagagaagataagaagaagttttgatgaggttgtgataagg
acaacagttttggttggatttcctacagaaactgacgaggagtttgaagagctctgcagc
tttttaaggtgggctgagtttgacaggcttggcgcttttatgtattctcaggaggaaggt
acacctgcttcgcagcttcctcaggttgacgatgaggtgaaacaaagaagatatgaaaag
gttttgaatattcaaagaaaaatttctaaaaagcaaaacaaaaagcgagtaggcagagaa
tacgaagttgttatagaggcaaaagataaaaacaacttttatattggaaggagccagttt
gaagcaccagaggttgacggaaaagttctggtgttttcacaaaataaactgacagctggt
cagtttgtcaaggtaaagatactcgatgcgtttgagtatgatttggtaggagagataatt
tga
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