Caproicibacterium lactatifermentans: GJQ69_01340
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Entry
GJQ69_01340 CDS
T07898
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
clf
Caproicibacterium lactatifermentans
Pathway
clf00730
Thiamine metabolism
clf01100
Metabolic pathways
clf01240
Biosynthesis of cofactors
clf04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
clf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
GJQ69_01340 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
GJQ69_01340 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clf03016
]
GJQ69_01340 (thiI)
Enzymes [BR:
clf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
GJQ69_01340 (thiI)
Transfer RNA biogenesis [BR:
clf03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
GJQ69_01340 (thiI)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
tRNA_Me_trans
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
QKN23249
UniProt:
A0A859DNX9
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Position
283231..284403
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AA seq
390 aa
AA seq
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MKEIILIKLGELVLKGLNRRTFEDTLLKNLRHHLEPLGKFDIRSRQSAVTVMPREEVDMD
EAMDRVGHVFGIATYVRAGVAPKNMDKIELAAADYLRRELLAAHTFKVEAKRSDKKFPIK
SPQICAELGGCLLEHFPNLKVDVHHPDVTVYVEVRDFGAYIHSNPKRGAGGIPVGTGGKA
ALLISGGIDSPVAAWRMARRGVELTAVHFASPPYTSERAEQKVVDLLTQVSSYAGRIPMY
TVPFAHVQEEIRDKCPEDLFTLLMRRFMMRVSQQIAVQNDCLTLITGESLGQVASQTMQA
ICCTDACVSMPVFRPLIGSDKTEIVDTARKIGTFDISIEPYEDCCTVFTPKHPCTKPHED
KLERAEQLLDVEALVQECIQNASLRVVQPR
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaattattttaataaaacttggggaactggtgctgaaaggcctgaaccgccgc
acctttgaggatactctgctgaaaaatctccggcatcatttggaaccgctggggaagttc
gacatacgctcccgccagtctgctgtaaccgtcatgccgcgggaagaagtggatatggac
gaggcaatggaccgtgtgggtcatgtattcggcattgccacctatgtgcgtgcgggcgtt
gcgccaaagaatatggataaaatagagttggccgccgcagactatctgcgcagagaactg
ttggctgcgcatacttttaaagtggaagccaaacgttccgataaaaaattcccaatcaaa
tcgccgcagatatgcgccgaactgggtggctgcctgttggaacattttccaaacctgaag
gtggatgtacaccatccggacgtgaccgtttatgtggaagtccgtgactttggtgcctat
attcacagcaatcccaaacggggcgccggcggtattccagtgggaaccggcggaaaagcc
gcactgctcatcagcggcggcattgacagcccggttgccgcgtggcggatggcccgccgc
ggcgtggagttgaccgcggtccatttcgcaagcccaccgtacaccagcgagcgcgcggag
cagaaagtggtggacctattaacacaggtcagcagctatgcgggacgcattcctatgtac
acggtgccctttgcccatgtacaggaggaaatccgcgacaagtgtccggaggaccttttt
acactgctgatgcgccgctttatgatgcgcgtttcccagcagatcgctgtacagaatgac
tgcctgacgttgattaccggcgaaagtttggggcaggtggcaagtcagaccatgcaggcc
atctgctgcacagacgcctgtgtttccatgccggtgttccggccgcttatcggttccgat
aaaacggaaattgttgatacagcgcggaaaattggcacgttcgatatttccattgaaccg
tatgaggactgctgcacagtctttacgccgaagcacccctgcaccaaaccgcacgaggat
aagctggagcgggcggaacagctgctggacgtagaggcactggtgcaggaatgtatacag
aatgcgtcgctgcgtgtggtgcagccgcggtaa
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