Caldisphaera lagunensis: Calag_0485
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Entry
Calag_0485 CDS
T02380
Name
(GenBank) DNA-directed RNA polymerase subunit E'
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
clg
Caldisphaera lagunensis
Pathway
clg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
clg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Calag_0485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clg03021
]
Calag_0485
Enzymes [BR:
clg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Calag_0485
Transcription machinery [BR:
clg03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Calag_0485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-ProteinID:
AFZ70251
UniProt:
L0A8S8
LinkDB
All DBs
Position
complement(481799..482371)
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AA seq
190 aa
AA seq
DB search
MYAQYTLHEWVGVSPDVAFTENLKKAVIETLRSELEGQADPDLGIIIAVLDAEIEGDGIL
LSEDPNIYFPVKYTLISYEPMQLEVSKGIVRDARDFGLFVSLGPIDGFVHRSQIMDEDIE
YIQERRGFKGKETGRLIEAGDIVNVRITQISKTSKKSGLYRIGLTMRQPYLGKEEWYKAN
KEQKTENEQK
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcacaatatacgctccatgaatgggttggcgtctcaccagatgtagcatttaca
gaaaatctgaaaaaagcagttatagaaacgcttagaagtgaacttgaaggacaagctgat
cctgatttaggaataattatagctgtattagatgcagaaattgaaggcgatggaatatta
ttatctgaggacccaaacatatattttcctgttaaatatacgttaatttcttatgaacca
atgcaactagaggtaagtaaaggaatagttagagatgcaagagattttggacttttcgtt
agtttaggcccgatagatgggtttgttcatagaagtcaaataatggatgaggatattgaa
tatattcaagaaagaaggggatttaaaggtaaggaaacaggtaggcttatagaagcggga
gacatagttaatgttaggataacacaaataagcaagacatcgaagaaatctggcttatat
agaataggtttaacaatgaggcagccttatttaggaaaagaagaatggtataaagcaaac
aaggaacaaaaaacagaaaacgaacaaaaataa
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