Chlorobium limicola: Clim_0256
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Entry
Clim_0256 CDS
T00766
Name
(GenBank) pyridoxal-phosphate dependent TrpB-like enzyme
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
cli
Chlorobium limicola
Pathway
cli00260
Glycine, serine and threonine metabolism
cli00400
Phenylalanine, tyrosine and tryptophan biosynthesis
cli01100
Metabolic pathways
cli01110
Biosynthesis of secondary metabolites
cli01230
Biosynthesis of amino acids
Module
cli_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Clim_0256
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
Clim_0256
Enzymes [BR:
cli01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
Clim_0256
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GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
ACD89351
UniProt:
B3EEW8
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All DBs
Position
complement(288452..289825)
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AA seq
457 aa
AA seq
DB search
MSADLTKVILEEHELPRQWYNIQADLPSPMPPPLGMNGLPISPDDLAKVFPMNLIEQEMS
TERWIDIPEEVLGILKLWRPSPLYRAKRLEKALGTPAKIYYKNEGVSPAGSHKPNTAVAQ
AWYNREFGIKYLTTETGAGQWGSALAMSCKLIGIECKVFMVRISFDQKPFRKIMMKTWGA
ECIASPSTQTAAGRAILEEMPDTPGSLGIAISEAIEQAVERDDTRYALGSVLNHVMLHQT
IIGLEAKKQFDKIGLYPDVVIGCAGGGSNFAGISFPFICDKIHGKEVQVIATEPEACPTL
TRGPYVYDTGDVAKMTPLLPMHSLGHRFIPPAIHAGGLRYHGMAPLVSHVKQLGLIEATA
LPQSECYEAALLFAHTEGFIPAPETSHAIAQTIREAKKAKEEGKEKVILMNWSGHGLMDL
QGYDAFLSGKLSDYALPEELLEQSLASIKDHPLPPQR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagatctcaccaaggtcatcctcgaggaacacgaattgccaaggcagtggtac
aacatccaggcggatcttccttcgcccatgcctccgcctctcggcatgaacggcctgccg
atttcacctgatgatcttgcaaaggtttttccgatgaacctgatcgagcaggaaatgagc
accgaacgatggatcgacatccccgaagaggtgctcggcattctgaagctctggcgtccc
tcaccgctttaccgggcaaaacggcttgagaaagcccttggcactccggcaaaaatctac
tacaaaaatgaaggggtatcgcctgccggaagccacaaaccgaacaccgcggtagctcag
gcatggtacaaccgggaattcggcatcaaataccttacaacggaaacaggagcgggccag
tggggaagcgcccttgccatgagctgcaagctgatcggcatcgagtgcaaggtgttcatg
gtgcgcatcagtttcgaccagaagccgttccggaagatcatgatgaaaacatggggagcc
gaatgcattgccagcccgagtacccagaccgcagcaggacgcgccattctcgaggaaatg
cccgacactcccggaagcctcggtatcgccatcagtgaagccatcgagcaggctgtcgaa
cgggatgatacccgctatgcgctcggcagcgttctgaaccatgtgatgctgcaccagacc
atcatcggtcttgaagcgaaaaagcagttcgataaaatcggcctctacccggatgtggtg
atcggctgtgccggaggcggatcaaattttgccggtatcagctttcccttcatctgcgat
aaaatacacggcaaagaggtgcaggtaatcgctaccgagccggaagcgtgccccacgctg
accagaggcccctatgtttacgataccggcgatgttgccaaaatgactccgctgctgccc
atgcacagccttgggcaccgctttatacctccggcaattcacgcaggcggacttcgttac
cacggcatggctcctctggtaagtcatgtcaaacagctgggactcatcgaggctacggcc
ctgccccagagcgagtgctacgaagccgcactgctttttgcccataccgaagggttcatt
ccggctcctgaaacctcgcatgccattgcccagaccatccgtgaagcgaaaaaagcgaag
gaggagggaaaggagaaggtgattctcatgaactggtcaggacacggactgatggatctg
cagggttacgacgcttttctgtcgggaaaactctccgattacgcgcttccggaggaactg
cttgaacagtcgctggcttccatcaaagatcatcctctgcccccgcaacgatga
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