Chlorobium limicola: Clim_1585
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Entry
Clim_1585 CDS
T00766
Name
(GenBank) Squalene/phytoene synthase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
cli
Chlorobium limicola
Pathway
cli00906
Carotenoid biosynthesis
cli01100
Metabolic pathways
cli01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
cli00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Clim_1585
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cli01006
]
Clim_1585
Enzymes [BR:
cli01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
Clim_1585
Prenyltransferases [BR:
cli01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Clim_1585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ACD90630
UniProt:
B3EDK5
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All DBs
Position
1706574..1707503
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AA seq
309 aa
AA seq
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MNYHYNGQTAVQGKEKALTLENAYRYCRQISKHHAKTFYLATLFLPKRQQNPIFAIYALL
RTVDDLVDLAEDKLTNGQITRQEINSLLENWKIRLKQCYRGEVSRDPIMMAWHDTLKTYP
IPIELPLDLMDGVAMDIEFKKFETFDDLYVYCYKVASVVGLMTSEIFGYSDRQALQHAID
LGIAMQLTNILRDIGEDIDRGRIYLPMEDLKRFGYSEEEFMKKTMNHNFLAMMKFQIERA
RSYYRSSEKGIPMLEKESRFAVMISSRNYCNILQAIEENNYDVFSRRAYRSFYQKIRTIP
EIWYKTRVS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaattaccattataatggacaaaccgccgtgcaagggaaagaaaaggcgctcaccctt
gaaaatgcatatcgatactgccgtcagatatcaaaacatcacgcaaaaaccttttatctg
gcaaccctttttctgcctaaacgacaacagaatccaatattcgccatctatgccctgcta
cgaactgttgacgatctggtagatcttgccgaagacaagctcaccaacggccagataacc
cgtcaggaaatcaacagcttgctggaaaactggaaaatcaggctgaaacagtgctaccga
ggagaagtgagccgcgaccccatcatgatggcatggcacgataccctgaaaacctatccc
atacctatcgaactcccgctcgaccttatggacggcgtcgccatggacatcgaattcaag
aagtttgaaacctttgacgacctttatgtgtactgttacaaagtcgcttcagtcgtaggg
ctcatgacatcggaaattttcggatacagcgaccgtcaggcactgcagcatgccatagat
ctcggtattgccatgcagctcaccaatattcttcgagacatcggtgaagatattgaccga
ggcagaatctatctccccatggaggatctgaaaagattcggatacagcgaggaagagttc
atgaaaaaaaccatgaaccacaattttctggcaatgatgaagttccagattgaacgggca
agaagttactaccgttcttctgaaaaagggatcccgatgcttgaaaaagagagccgtttt
gccgttatgatcagcagtcggaactactgcaatattctccaggccattgaagagaacaat
tacgacgtcttttcccgaagggcttaccgctctttttatcagaaaatccgcaccattccg
gaaatctggtataaaacaagagtctcgtaa
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