Nitratidesulfovibrio liaohensis: KPS_001943
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Entry
KPS_001943 CDS
T09362
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
clih
Nitratidesulfovibrio liaohensis
Brite
KEGG Orthology (KO) [BR:
clih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clih03009
]
KPS_001943 (rimO)
Enzymes [BR:
clih01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KPS_001943 (rimO)
Ribosome biogenesis [BR:
clih03009
]
Prokaryotic type
ribosomal protein modification factors
KPS_001943 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WMW63970
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All DBs
Position
2229104..2230444
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AA seq
446 aa
AA seq
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MISVYSVSLGCPKNRVDTERLLGALGAPVRPVASMAEADVVLVNTCGFILPAVEESVRTV
VEAVDEISGLARRPLLAVAGCLVGRYGERDLAAELPEVDLWLPNQSIETWPDLLARAVGA
RVAGVGGIAPGYAGGTRLLSTGPSYAWLKISDGCRHNCSFCTIPSIRGAHRSTPAAELER
EARQLLDMGVRELILVAQDVTAWGEDMESASGKGDLRPLLDRLLPLPGLDRLRLMYLYPA
GLNDDLLAYLAAAGAPFVPYFDVPLQHAHPDVLGRMGRPFARNPRVVVDRIRKHFPDAAL
RTSIIVGFPGETEEHYAALTDFVVETRFHHLGVFAYRAEEGTPAATMPEQIEDSVKEWRR
DALMEVQAEISEEIMESYVGQRLPVLVDAPHDEWPGLHTGRTWFQAPEIDGVTYVSGAGV
APGALVEADIVEARTYDLVALAEPEE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgataagcgtttattccgtcagccttggctgccccaagaaccgcgtggacaccgaacgc
ctgctgggcgcgctgggcgcccccgtgcgccccgtggccagcatggccgaggccgacgtg
gtgctcgtgaatacctgcgggttcatcctgcccgccgtggaagaatcggtgcgcacagtg
gtggaggccgtggacgagatttccgggcttgcccggcgccccctgctggccgtggccggg
tgcctggtgggccgctatggcgagcgcgacctggccgccgaactgccggaagtggacctg
tggctgcccaaccagtccatcgagacatggccggacctgctggcacgcgccgtgggggcc
agagtggccggagtcggcgggatcgcgcccggctacgcggggggcacgcggcttctgtcc
accgggccgtcgtacgcctggctgaagatcagcgacgggtgccgccacaactgttcgttc
tgcaccatcccttccattcgcggggcgcaccgctccaccccggctgcggaactggaacgc
gaggcgcggcaactgctggacatgggcgtacgggaactgattctggtcgcgcaggacgtc
accgcctggggcgaggatatggaaagcgccagcggcaagggcgacctgcgccccctgctg
gaccggctgctgcccctgccggggctggaccggctgcgcctgatgtacctgtaccccgcc
gggctcaacgacgacctgctggcgtaccttgcggcggcgggcgcgcccttcgtgccctat
ttcgacgtgcccctgcagcacgcccaccccgacgtgctgggccgcatggggcgcccattc
gcccgcaacccgcgcgtggtggtggaccgcatccgcaagcactttccggacgcggccctg
cgcacctcgatcatcgtgggctttcccggcgagacggaggaacactacgccgcgctcacc
gactttgtggtggagacgcgcttccatcaccttggcgtgttcgcctaccgggcagaggaa
ggcacccccgccgccaccatgcccgagcagattgaggacagcgtgaaggagtggcggcgc
gatgcgctgatggaagtacaggccgaaatcagcgaggagatcatggaatcgtacgtaggc
cagcggttgcccgtgctggtggacgccccccacgacgaatggcccggcctgcacacgggc
cgcacatggttccaggccccggagattgacggggtgacctacgtgagcggggccggagtg
gcccccggcgcgctggtggaggcggacatagtggaggcccggacctacgatctggtggcc
ctggccgagccggaagagtag
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