Nitratidesulfovibrio liaohensis: KPS_001978
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Entry
KPS_001978 CDS
T09362
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
clih
Nitratidesulfovibrio liaohensis
Pathway
clih00540
Lipopolysaccharide biosynthesis
clih01100
Metabolic pathways
clih01250
Biosynthesis of nucleotide sugars
Module
clih_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
clih00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
KPS_001978 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
clih01005
]
KPS_001978 (rfaD)
Enzymes [BR:
clih01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
KPS_001978 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
clih01005
]
Core region
KPS_001978 (rfaD)
BRITE hierarchy
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
ThiF
Motif
Other DBs
NCBI-ProteinID:
WMW64003
UniProt:
A0AA51UNG5
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All DBs
Position
complement(2277645..2278628)
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AA seq
327 aa
AA seq
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MYIVTGGAGFIGSAMVWKLNRMGIDDIIVVDNLATTEKWKNLVNLRYADYIHRDGFMDMV
LHGDLPWEVDAIVHMGACSSTTERDADFLMENNFRYSRMLCTLAMQTGARFVNASSAATY
GDGTLGFSDDDALMPRLKPLNMYGYSKQLFDLWARREGLLDSIASLKFFNVYGPNEYHKD
DMRSVICKSFHNVNNAGRITLFRSNHPDYADGGQMRDFVYVKDCVEVMWWLLQHPEVGGV
FNVGTGTSRTWNDLARAVFASMDREPIIEYMDMPAHLAGKYQNYTQASMDKLRRAGCDVP
FRSLEDGVDDYVRGYLATDDPYLSPEA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcgtcaccggcggcgcggggttcatcggcagcgccatggtctggaagctgaac
cgcatgggcatcgacgacatcatcgtcgtggacaacctggccaccacggaaaagtggaag
aacctcgtcaatctgcgctacgcggactacatccaccgcgacgggttcatggacatggtc
ctgcacggcgacctgccgtgggaagtggacgccatcgtgcacatgggggcgtgctcgtcc
accacggaacgcgacgccgacttcctgatggaaaacaacttccgctacagccgcatgctg
tgcacgctggccatgcagaccggcgcgcgcttcgtcaacgccagcagcgccgccacctac
ggcgatggcacgctgggcttttccgacgacgacgcgctgatgccccgcctgaagcccctg
aacatgtacggctactccaagcaactgttcgacctgtgggcgcggcgcgagggcctgctg
gattccatcgccagcctgaagttcttcaacgtttacggccccaacgaataccacaaggac
gacatgcgcagtgtcatctgcaagtcgttccacaacgtgaacaacgcgggccgcatcacc
ctgttccgctccaaccacccggactacgccgacggcggccagatgcgcgacttcgtgtac
gtgaaggactgcgtggaggtgatgtggtggctgttgcagcaccccgaggtgggcggcgtg
ttcaacgtgggcaccggcacctcgcgcacctggaacgacctggcccgcgccgtgttcgcg
tccatggaccgcgagccgatcatcgaatacatggacatgcccgcgcaccttgcgggcaag
taccagaactacacccaggccagcatggacaagctgcgccgggccgggtgcgacgtgcct
ttccggtcgctggaagacggcgtggacgactacgtgcgcggctacctggccaccgatgat
ccgtacctgagcccggaagcgtaa
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