Chondrinema litorale: OQ292_01505
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Entry
OQ292_01505 CDS
T09098
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
clit
Chondrinema litorale
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clit03009
]
OQ292_01505 (rimO)
Enzymes [BR:
clit01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OQ292_01505 (rimO)
Ribosome biogenesis [BR:
clit03009
]
Prokaryotic type
ribosomal protein modification factors
OQ292_01505 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
DUF2004
Motif
Other DBs
NCBI-ProteinID:
UZR94494
LinkDB
All DBs
Position
346624..347931
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AA seq
435 aa
AA seq
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MKTKSLKKDKVNIVTLGCSKNLVDSEVMLTQLKGNGLEVEHENKKDDANIVIINTCGFID
NAKQESIDTILRYVDAKQEGLVEKVYVTGCLSQRYKDSLEEEIPEVDAWFGTMELPLLLR
KFKADYKHELVGERITTTANHFAYMKISEGCDRPCSFCAIPLMRGKHVSKPIEELVKEAK
SLARNGVKELLLIAQDSTYYGLDIYKKRNLAELLERLSDVEGIEWIRLHYAFPAGFPEDV
LKVMAERENICNYIDMPLQSGSTKMLQLMRRGITREKTEVLIDKIRQSVPGIAIRTTLIS
GHPGETLKEHEETMEFVQKMKFDRLGVFPYSHEDNTHAFGMEDKLSDEEKEARAQEIMQI
QEDISLAHNKAKIGSTLKVLFDRKEGGYFVGRTEFDSPEVDNEVLLPASDFIRVGDFAQV
KITDATEFDLFGKIV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaccaaaagtcttaaaaaggataaagtgaatatcgttacactaggttgctctaaa
aacctagttgactctgaagtaatgcttacccagttaaaaggaaatggactggaggtagaa
catgagaataaaaaagacgatgccaatattgtaatcataaatacctgtggctttatagat
aatgcaaagcaggaatcaatagatactattcttcgctatgtagatgcaaaacaagaagga
ttagtagaaaaagtttatgttacaggttgcctttctcaaagatataaagactcattagaa
gaagaaattcctgaagtagatgcatggtttggcactatggaattaccactacttctaaga
aagtttaaagccgattacaagcatgaattagtaggtgaaagaattactaccactgctaat
catttcgcttatatgaaaatttcagaaggttgcgatagaccttgttccttctgtgcaatt
cctttaatgagaggaaaacacgtttcaaaaccgatagaagagcttgtaaaagaagctaag
agtttagcaagaaatggggtaaaagaattactattaattgcacaagactctacttattac
ggccttgatatatacaagaaaagaaatttagccgaattgctagaaagactctctgatgta
gaaggaattgagtggataagattgcattatgcttttccagcaggttttccagaagatgta
ttgaaagtgatggctgagagagaaaacatctgcaattatattgatatgccacttcagtct
ggttctacaaaaatgcttcaattaatgcgtagaggtattaccagagaaaaaacagaagtg
cttattgataaaatcagacaaagtgttccgggtattgctattagaactacacttatttct
ggtcatccgggagaaactctaaaagagcacgaagaaacaatggagtttgtgcaaaaaatg
aaattcgacagattaggtgtatttccttattcgcacgaagataatacacatgcatttggc
atggaagacaaactaagtgacgaagaaaaagaagccagagcacaggaaataatgcaaata
caagaagatatttctttagcacacaataaagctaaaattggcagtacactaaaagtattg
ttcgacagaaaagaaggtggttactttgtaggtagaacagagtttgattcaccagaggta
gataatgaagttttactaccagcaagtgattttataagggttggagattttgcgcaagta
aaaattacagatgctactgaattcgacttattcggaaaaatagtataa
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