Chondrinema litorale: OQ292_08535
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Entry
OQ292_08535 CDS
T09098
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
clit
Chondrinema litorale
Pathway
clit03030
DNA replication
clit03410
Base excision repair
clit03420
Nucleotide excision repair
clit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OQ292_08535 (polA)
03410 Base excision repair
OQ292_08535 (polA)
03420 Nucleotide excision repair
OQ292_08535 (polA)
03440 Homologous recombination
OQ292_08535 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clit03032
]
OQ292_08535 (polA)
03400 DNA repair and recombination proteins [BR:
clit03400
]
OQ292_08535 (polA)
Enzymes [BR:
clit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OQ292_08535 (polA)
DNA replication proteins [BR:
clit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OQ292_08535 (polA)
DNA repair and recombination proteins [BR:
clit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OQ292_08535 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OQ292_08535 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
HHH
IMS_HHH
DNA_pol_lambd_f
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UZR95859
LinkDB
All DBs
Position
complement(2054095..2056890)
Genome browser
AA seq
931 aa
AA seq
DB search
MPSKKLFLLDAMALIYRAHFAFSKNPRVNSKGMNTGAVLGFTNTLWEIIRKEKPSHIGVA
FDTHAPTFRHIEYKEYKAQREAQPEDIQVAVPYVKKLVKAFQIPVLELDGYEADDVIGTI
AKQMSKHDFEVFMMTPDKDYGQLVEDHIYLYKPAFMGNGVEVMGIPEVLNKWNISRIDQV
VDMLGLQGDSVDNIPGIPGIGPKTAAKLLEQYDTVEGIIEHADELKGKQKERVKENADLA
VLSKRLAKIDIEVPIEYSEEDLVYQGFEEKSLKTLFDELEFRTLADRIMGKEKSATKKKT
KATAASSGQMSLFEKAEEKEETILPTEKKDISSVAHNYYLVDEEERMLELADFLSKQDEF
CFDTETTNLDPFEAELVGISFSYVTGEAYYINVPSDKEKAQQIVDIFKPVFENDKIMKIG
QNVKYDRIVLENYGVSLKGKIFDTMLAHYLIEPDMRHNMDVLAETYLNYTPVSIETLIGK
KGKKQKSMRDADPVLVTEYAGEDADITLQLKQVFAPLLSEEKIKKLFFDVECPLVEVLSD
IERNGVKIDTAALKNYSEEIQNDVTELEKGIYEKAGEEFNIGSPKQLGEILFDKLKLVDK
PKKTKSGQYATGEEILVTLSQEHDIVQQILDYRQLQKLKSTYVDALPTLISPKDGLIHTS
YNQAVAATGRLSSTNPNLQNIPIRTDRGREIRKAFVPRSEDYIIMAADYSQIELRIMAAF
SKDEVMIDAFKNGRDIHATTASKLYKVPLEEVDGEMRRKAKTANFGIIYGISAFGLSQRL
NIPRKEAGELIEAYFEEFSSIKKYMDEIINFGREHEYVETILGRKRYLRDINSRNYTLRG
FAERNAINAPIQGSAADMIKIAMIQINDWLKKEKLQSKMIMQVHDELVFDVHKDELELMK
KQIPEMMKNALTLDVPMEVETGTGNNWLEAH
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaaaaaaattatttttactagatgccatggcactgatttatcgtgcccatttt
gcttttagcaaaaaccctcgtgtcaattctaaaggaatgaataccggagccgtattggga
tttaccaatacattgtgggagattattagaaaagagaagccttcgcacattggagtggca
tttgatacccatgcacctactttcagacatatagaatataaagaatacaaagcgcagcga
gaagcccagccggaagatattcaggtagcagttccttatgtgaaaaaactggttaaggct
tttcaaatacctgttttagaattggatggttacgaagcggatgatgtaattggaaccatt
gccaagcaaatgtctaagcacgattttgaagtatttatgatgacaccagataaagactac
ggtcagttggtagaagatcatatttacttatacaagcctgcttttatgggtaatggtgtt
gaagtaatgggtattccagaagtattaaataagtggaatatttctcgaatagatcaggta
gtagatatgctaggtctacaaggagatagtgtagataatattccaggtattccgggaatt
ggacctaaaaccgctgccaaacttttagaacagtacgatactgtagaaggaattatcgag
catgcagatgagcttaaaggcaagcaaaaagagcgtgtaaaagaaaatgcagacttggcg
gtactttcaaagagattagccaagattgatatagaagttccaatagaatattcggaagaa
gatttagtatatcagggatttgaagaaaaaagtctgaaaaccttattcgatgagctcgag
tttagaactcttgccgatagaataatgggcaaagaaaaatctgctacaaaaaagaaaaca
aaagctacagcagctagtagtggacaaatgtctttattcgaaaaggcagaagagaaagaa
gaaacaattctaccaacagaaaagaaagatattagtagcgttgcacacaattactatttg
gtagacgaagaagaaagaatgctggaactggcagacttcttaagcaaacaggacgaattc
tgttttgatactgaaacaactaaccttgatccttttgaggcagagttggtagggatttca
ttttcttatgtaactggcgaggcttattatatcaatgttccgtcagataaggaaaaggct
cagcaaattgtagacatatttaaacctgttttcgagaatgataaaattatgaaaataggc
cagaatgtgaagtatgatagaattgtgctagaaaactacggcgtatctctcaaaggaaaa
atctttgacaccatgttggcgcattatctcatagagccagatatgagacataatatggat
gtactggcagaaacttatctgaattacactcctgtttcaattgaaacccttattggtaaa
aaaggtaaaaagcagaaaagcatgcgagatgccgatcctgtattagtaacagaatacgca
ggcgaggatgctgatatcacattgcaattaaaacaagtttttgctcccctactcagcgaa
gaaaaaattaagaaactattttttgatgttgagtgcccactggttgaagtgctttcagat
attgagagaaatggtgtgaaaatagatacagcagcgcttaaaaattattcagaagaaatt
cagaatgatgtaactgagcttgagaaaggtatttatgaaaaggctggtgaagaatttaac
attggctcaccaaaacagcttggcgaaattcttttcgataagttaaaactggttgataag
ccgaaaaagaccaagtctggccaatatgcaacaggtgaagaaattttggttaccttatcg
caagagcacgacattgttcagcagattttagattacagacaattgcaaaaactaaaatct
acttatgtagatgccttgccaacccttattagtccgaaagatggtttaattcatacttca
tacaaccaagcagtagcagctacaggtcgattgagttctacaaaccctaacctgcaaaac
ataccaattagaacagatagaggtagagagattagaaaagcttttgttcctcgtagcgaa
gactatattataatggcagccgattattctcaaatcgaactgcgtataatggcagccttt
agtaaagatgaggttatgatcgatgcttttaaaaacggcagagatattcacgctactaca
gcaagtaaattgtataaagtacctttagaagaggttgatggtgagatgagaagaaaggca
aagaccgccaattttggtataatctatggaatttctgctttcggtctgtcacaacgtctt
aatattccaagaaaagaagctggcgaattgatcgaagcttatttcgaagagttttcatct
ataaaaaaatatatggatgaaataatcaattttggtagagaacacgaatatgtagaaacc
attcttggcagaaagagatatttaagagacatcaactcaagaaactatacacttagaggt
tttgcagagcgaaacgcgattaatgcaccaatacaaggaagtgctgctgacatgattaaa
attgccatgattcaaataaacgattggctgaaaaaagaaaagctgcaaagtaaaatgatt
atgcaggtgcatgatgaattggtgtttgacgtgcataaagatgagcttgaattaatgaag
aagcagattccagaaatgatgaaaaatgctttgactttagatgtgccaatggaagtagaa
acaggcacagggaataactggttagaagcacattaa
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