Clavispora lusitaniae ATCC 42720: CLUG_02945
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Entry
CLUG_02945 CDS
T01149
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CLUG_02945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clu03019
]
CLUG_02945
Enzymes [BR:
clu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
CLUG_02945
Messenger RNA biogenesis [BR:
clu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
CLUG_02945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
AAA_19
AAA_16
Motif
Other DBs
NCBI-GeneID:
8497964
NCBI-ProteinID:
XP_002617501
UniProt:
C4Y332
LinkDB
All DBs
AA seq
463 aa
AA seq
DB search
MSLEQSGEIQLDEGCEWRFEVPFKTILTLKVVDGIGEIFGTELPNDTEVHLTGAKAAVYA
PLPAGCRFQYSCSLNKENVNISSEDAKVSEYVSDESAVPAYTRLHFALDVKRQQAQASAA
RGPVVMVVGGAQCGKTALVKILASYAAKMDRCPLLVNLDPQQGVFSVPGSLTAAVVSDAL
DLEAVGGWGESPTSGAAFRQPKQPLVKSYGFCAPQDNSELFEHQAGALAAAAHERMASDA
NVRASGMIIDTPPWTMKDADLVQKIVERFEVDVVIAVGGDRLAVDLRRTFQSRVDENRLD
IVKVPRAGGVAEVDGAFLRKTQEDSIKEYFNGSRRTHLSPFKTDVDVKSVVIYKAVRLSE
YTSQMAFLPSGDSYTQEDTKPDLALDKYYVRIEATSANLENCVLAITQLDASEEPSKLLE
TSVLGYVHVSTVDDTKQRMSMLLPFPGQIPRKVLIATDIRYTE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttgaacagagcggcgagatccagctcgacgaaggctgtgaatggcgctttgaa
gtgcccttcaaaaccatcttgacgctcaaagttgttgatggcattggcgagatttttggc
acggaacttcccaacgacaccgaagtccatcttacgggagcaaaagccgccgtgtatgcg
cctttgccggccgggtgccgtttccaatactcgtgctcgctcaataaagagaatgtcaac
atctcgagcgaagacgccaaagtcagcgagtacgtgagtgatgaatctgctgttccagcc
tatacgcggctccattttgcgttggatgttaaaagacaacaagcacaggcatcggcggct
agaggacccgttgttatggttgtgggcggcgcccagtgcggcaaaacagccctcgtgaag
atattggcctcgtacgccgcaaaaatggacagatgcccgcttttggtcaacttggacccg
cagcagggcgttttctctgtgcccgggtcgttgacggccgcagttgttagcgacgctctc
gacttggaagctgtgggcggctggggcgagctgccgacactgggagcggcgtttcgccag
cccaaacagcctttggtcaagagctacggcttttgcgccccacaggacaactccgagctc
tttgaacaccaggcgggcgcccttgctgcggccgcacatgaacgcatggcgtcagacgcc
aatgtccgtgcttctggcatgattatcgatacgccgccctggacaatgaaggacgcagac
ctcgtacagaaaatcgtggagcggtttgaggtcgacgttgtgattgccgtgggcggagat
agacttgccgtcgaccttcggcggacgtttcagtctcgcgtggacgaaaaccgcttggat
attgtcaaagtgcctcgtgccggcggagtggccgaggtagacggagcgtttttgcgtaaa
acacaagaggacctgatcaaagagtacttcaacgggtcgcgacgcacgcacttgtcgccg
ttcaaaaccgacgtggatgtcaagtccgtggtcatatataaggctgtgcgtcttctggag
tacacttcccaaatggcattcttgccttctggagactcgtacacgcaggaggacacgaaa
ccagacttggccttggacaagtactacgtgcgtatcgaggctacaagcgccaatttggag
aactgtgtgttggcgatcacgcagttggatgcatctgaagagccgctgaagttgttggag
acgtctgttctcggctacgtacatgtgtcgactgtggatgacaccaagcaaagaatgtcc
atgttgttgccttttccgggacagatcccaagaaaggtgctcattgcaactgacattcgg
tacacggagtaa
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