Clavispora lusitaniae ATCC 42720: CLUG_02993
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Entry
CLUG_02993 CDS
T01149
Name
(RefSeq) DNA-directed RNA polymerase III largest subunit
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
clu
Clavispora lusitaniae ATCC 42720
Pathway
clu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
clu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLUG_02993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clu03021
]
CLUG_02993
Enzymes [BR:
clu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLUG_02993
Transcription machinery [BR:
clu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
CLUG_02993
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
8498022
NCBI-ProteinID:
XP_002617549
UniProt:
C4Y380
LinkDB
All DBs
AA seq
1491 aa
AA seq
DB search
MTSARRRPAVRPRDRASSRTKIFPIASIQLHFSMKEVVVDVAPKCIKGLEFSALSARDIV
AQSEVEITTRDLYDLEKGRSVREGGALDTKMGTSTNAVECSTCHGNLATCHGHFGHVRLA
LPVFHVGYFKAIISVLQCICKNCAAVLLDEQTKRAFLSDLRRPNIDNLRRMKVLKKVVEQ
CKKQRRCLKCHHVNGVVKKAASGAGPAALKILHDTFRYVGKKSAPEKDLWDREFDEVFHR
NPELEKFAKRVHEDLNPLKVLNLFRQITPQDCELFGIDAARGGRPEMYIWRYLPAPPVCI
RPSVMMDNQSNEDDLTVKLTEIVWTSSLIKAGIEKGISINNMMEQWDYLQLSVAMYINSD
SANPALLPGGMGGSGSKSSKPIRGFCQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLR
IDEVAVPDRVAKILTYPEKCTRYNRQKLQKLILNGPTVHPGANYVLKQNEVAKRNLKFGD
RVKLAKTLRIGDIVERHIEDGDVVLFNRQPSLHRLSILSHYAKIRPWRTFRLNECVCTPY
NADFDGDEMNLHVPQTEEARAEAINLMGVKNNLLTPKSGEPIIAATQDFITGSYLISHKD
SFFDRASLVQLLCMMSDADMQFDIPPPTVFKPVMLWTGKQVFSMLIRPNKKSNVVINVDA
KNKTFIPPPKHLPNEMSPNDGFVVIRGSQILSGVMDKSTLGDGKKHSVFYTILRDYGPDE
AAKAMNRMAKLCARYLGNRGFSIGINDVTPGADLKAKKERMVEAAYAKCDELIDLYTKGK
LETQPGCNEEQTLEAKIGGLLSKVREEVGEVCIRELDSLNAPLIMATCGSKGSTLNVSQM
VAVVGQQIISGNRVPDGFQDRSLPHFTKMSKTPQSKGFVRNSFFSGLSPPEFLFHAISGR
EGLVDTAVKTAETGYMSRRLMKSLEDLSSSYDNTVRNSSNGIVQFTYGGDGLDPLDMEGD
AQPVNFNRQWDHAYNITYNQKEANLLPFQIMDVVNSILAPLENKLVRYDNLGNLIEGEIG
DRIEYIDQKDAERAFYQSIRTYVQKKATQLARLRQQKKLRPFLTKLEDDGDMVLDEDPVS
INAINQLMKISQTCVEEFLKQCLYKYLRARVEPGTAVGAIGAHSIGEPGTQMTLKTFHFA
GVASMNVTLGVPRIKEIINAAKVISTPIINTVLVNDEDEVAARVVKGRIEKTLLRDVAFF
VEDVYKNDMAYLSIKIDLKTIEKLQLELTMDNIRQAIANAPKLKILNSEVSVYGKDRINV
LVTLRESKSESLARTAASDYKASDVNNSLFFRMQHLKRALPDVVIKGLPNISRAVINIRD
DSKKELLVEGYGLKDVMSTDGIVGTKTSTNHVLEVYEVLGIEAARASIIGEIDYTMSKHG
MSVDPRHIQLLGDVMTYKGEVLGITRFGLSKMRDSVLQLASFEKTTDHLFDAAFFMKNDK
IEGVSECIILGQTMSIGTGAFKLVKTSHFEEKHLKPKPCLFEGLCEVSAMA
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgccagacgccgtcctgcagtacggccacgtgaccgcgcctcttcccgcacc
aaaatctttcccatcgctctgatccaactccacttttcaatgaaggaggtggttgtcgac
gtggcgcccaaatgcattaaagggctcgagttttctgcgttgtcggcgcgcgacattgtc
gcccagtccgaagtcgaaatcaccacgcgagacttgtacgatttggaaaagggcagaagt
gtgcgagaaggcggcgctttggacacaaaaatgggtacctccaccaacgctgtcgagtgt
agtacatgccacggcaacttggccacgtgccacggccactttggccatgtgagattggcc
ttgcccgttttccacgtgggctacttcaaggccatcatcctggtgcttcagtgcatctgc
aagaactgtgcggcggtgcttttagacgagcagacaaagcgggcgtttttgctggacttg
cgccggcccaacatcgacaacttgcgccgcatgaaggtgctcaagaaggttgtggagcag
tgcaaaaagcaaagacgctgcttgaagtgccaccacgtcaacggtgtggtgaaaaaggcc
gcttccggtgccggccctgctgccttgaaaatcttgcacgacaccttccggtacgtgggc
aaaaagtctgcgccggagaaagacttgtgggaccgcgagttcgacgaggtgttccaccgc
aacccagagctcgaaaaattcgccaaacgtgtgcacgaggacttgaatccgctcaaagtg
ctcaacttgtttcgccagatcacaccgcaggactgcgagctttttggcattgacgccgcc
cgcggcggaagaccggaaatgtacatctggagatacttgcctgcgccgccagtgtgtatc
cgtccttcggtgatgatggacaatcagtcgaacgaggatgatctcactgtgaaattaacc
gagattgtgtggacgtcgtcacttatcaaggccggtatcgaaaaaggtatttccatcaac
aacatgatggaacagtgggactacttgcagttgtctgtggccatgtacatcaactccgac
tcggccaacccggcgttgcttcccggtggaatgggagggtcgggctcgaaaagcagtaag
ccgatccgtggtttttgccagagattgaaaggtaaacagggtcgtttccgtggtaacttg
tctggtaaaagagtggatttttcgggccgtacagttatttctcccgatccaaacttgcgt
attgatgaagtggccgtgccagatcgtgtggcgaaaatcttgacctatcctgaaaagtgt
acacgctacaatagacagaagcttcaaaaattgatcttgaacggacctactgtgcatcca
ggtgcgaactacgtcttgaaacagaacgaagtggcaaaaagaaacttgaagttcggtgat
agagtcaagcttgcaaaaactttgcgcattggcgatatcgtcgaaagacacatcgaagat
ggtgatgttgttcttttcaacagacagccatcgttgcatcgtttgtccatcttgtcgcat
tacgctaaaatccgtccatggcgtacattccgtcttaacgaatgtgtgtgtacaccttac
aatgccgatttcgacggagatgaaatgaatttgcatgttcctcaaacagaagaagcccgt
gccgaggcaatcaatttgatgggtgtgaagaacaatttgcttacgccgaaatcaggtgag
cccatcattgctgccacgcaagatttcattactggctcatacttaatttctcataaagac
tcgtttttcgaccgggcttcgttggtgcagcttttgtgtatgatgtcggatgcagacatg
cagtttgacattcctccacctactgtcttcaagccagtcatgttgtggactggaaaacag
gtgttttccatgctcatccgcccaaacaagaagtccaatgttgtgatcaacgtggatgcg
aaaaacaaaacgtttattccaccaccaaagcacttgccaaatgaaatgtcgccaaatgac
gggtttgtggtgatccgtgggtctcaaatcttgtcgggagtcatggataagtctacgttg
ggagacggcaaaaaacactctgtgttctacactatattgcgagattacggaccagatgag
gctgctaaggccatgaatagaatggctaaactctgtgccagatacttaggaaaccgtggt
ttctccattggtatcaatgatgtgactccaggtgcagacttgaaggcaaaaaaggagagg
atggtagaggctgcgtatgccaagtgtgacgagttgattgacttgtacactaagggaaaa
ttggaaacgcaaccgggttgtaatgaagaacaaactttggaggcgaaaattggtggtttg
ctttcgaaagtcagagaagaggtgggtgaagtttgtattcgagagttggattcgcttaat
gcgccattgatcatggctacatgtggttctaaaggttccactttgaacgtttctcaaatg
gtggctgtcgtgggtcaacagattatctcgggtaaccgtgtgcctgatggatttcaggat
agatcattaccgcatttcaccaaaatgtccaaaacgccgcagtccaagggttttgttaga
aattcttttttcagtggtttgtctccgccagaattcttgttccacgctatttccggaaga
gaaggtttggttgataccgctgtcaagactgccgagactggttacatgtcgcgtcgtctt
atgaagtcccttgaagatttgtcttcgctgtacgacaacaccgtcagaaactcgtccaac
ggtatcgtgcagttcacttatggaggtgatggtttggatcctttggatatggaaggtgac
gcccagccagtgaacttcaaccgtcaatgggaccatgcatacaacatcacatacaaccaa
aaagaggccaacttacttccattccagatcatggatgtggtcaattcaattttggctcct
ttggaaaacaaattagtgcggtacgataacttgggcaatctcattgaaggtgagattggc
gaccgcattgagtacattgaccaaaaggatgccgagcgggcattttatcagtcgatccga
acttatgttcagaaaaaggccactcaacttgcccggctccggcagcaaaagaagttgaga
cctttcctcaccaaactcgaagacgacggtgatatggtgctagacgaagaccccgttagc
atcaatgcaatcaaccaattgatgaagatttcacaaacatgcgtggaggaatttttgaag
cagtgtctttacaaatatctacgtgcacgtgtggagcctggaactgcagttggagctatt
ggtgctcattctatcggtgagccaggtacccagatgacgttgaagactttccactttgct
ggtgtggcttcgatgaacgtgacattgggtgttccgcgtattaaggaaattatcaatgcg
gccaaggtgatttcgacgccgatcattaacacagtgttggtgaatgacgaagacgaagtt
gctgctcgtgtggtgaagggtagaatagagaagactcttttacgagacgttgcatttttc
gtggaggacgtttacaagaacgacatggcatacttgtcgatcaagatcgacttgaaaaca
atcgaaaagttgcagttagagttgactatggataatatccgtcaagccatcgccaacgca
ccaaagttgaagatcttgaactccgaagtgtcggtttatggtaaggaccgcataaatgtt
cttgtcacgttgcgtgaatccaaatccgaatctttggcccgtacagcagcgtcggactac
aaagcttctgatgtgaacaacagcttgttcttccgcatgcagcatttgaaacgagctttg
ccagacgtggtcatcaaaggacttccgaatatctctcgtgccgtgattaatatcagagac
gatagcaaaaaggagttgttagttgaaggctacggattaaaggatgtcatgagtaccgac
ggtattgtcggaaccaaaacaagcacaaaccacgtgctagaagtgtatgaagttttgggt
attgaggcggctcgtgcatccatcattggcgaaatcgactacacaatgagtaagcacggt
atgagtgtggatcctcgtcacatccagttgttgggtgacgtgatgacatacaagggagaa
gttttaggtatcacgagattcggtttgagcaaaatgagagactcggtgttgcagttggca
tcgttcgaaaaaaccaccgaccatttgtttgacgcagcgtttttcatgaaaaacgacaag
atcgaaggtgtgtcggagtgtattattttgggccagactatgagcataggaaccggtgca
ttcaaattggtgaagacatcgcacttcgaagaaaagcatttgaaaccaaaaccttgcttg
ttcgaaggtctctgcgaagtctctgcgatggcataa
DBGET
integrated database retrieval system
