Canis lupus dingo (dingo): 112640376
Help
Entry
112640376 CDS
T08371
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X2
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04612
Antigen processing and presentation
clud05145
Toxoplasmosis
clud05152
Tuberculosis
clud05164
Influenza A
clud05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
112640376 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
112640376 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
112640376 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
112640376 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
112640376 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
clud01001
]
112640376 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
clud04054
]
112640376 (CIITA)
Enzymes [BR:
clud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112640376 (CIITA)
Protein kinases [BR:
clud01001
]
Serine/threonine kinases: Other
TAF1 family
112640376 (CIITA)
Pattern recognition receptors [BR:
clud04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
112640376 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
112640376
NCBI-ProteinID:
XP_035574048
Ensembl:
ENSCAFG00020024803
LinkDB
All DBs
Position
6:complement(31675442..31745051)
Genome browser
AA seq
1206 aa
AA seq
DB search
MNHFQTILARVRMLLSSHQPSQVQALLDNMLEKELLSREYHCALLHEPDGEALARKISLT
LLEKGDPDLALLRWAWSGWQTPVAEGDPNSSKDHVDSGQFATMELGPLEGGYLELLNSST
DPLQLFHLYDQTDLAREEIELFSEPDMDTINCEQFSRLLCDMEGDEETREAYANIAELDQ
YVFQDSQLEGLGKDIFIEHIGLEDMISETVEVLEEAGQKSQKRPFPEELPVDLKHRKLAE
PLTVPMVTGTFLVESVSDPSALPCLSSPAIFNEQPAPVQSWLGETVLMPVPASGSLLSCL
SLPAGGIQIVPSLPSLPQGLWPISGAGTGVSGMVIYQGEMPQASQVLPSSGPAVQSLPKS
PDRPGSTSPFAPSAADLPGMPEPALTSRANMTEDQLSPPRCVAAHEVSSKPPKLPESVKQ
FCSSLRDKYQAEPAGPDGILVEVELVRARLEKSSSKSQDRELATPDWAERQLARGGLAEV
LLAAGDRRRPRETQVIAVLGKAGQGKSCWAREVSRAWACGQLPQYDFVFYIPCHCLDRAG
DTYRLQDLLFSLGPRPQPVDDEVFGHILRRPDRVLLILDAFEGLEGQDGACGPTSTEPQS
LRGLLAGLFQRKLLRGCTLLLIARPRGRLAQSLSKADVVFEVAGFSAQQAETYMTRYLDH
SGATEHRERALALLRGQPFLLSHSHSPTVCQAVCQLSEALLELGDGAKLPSTLTGLYVGL
LGPAAQDSPPGALAGLARLAWELGRRHRGTLQESQFPSAEVRAWAVAKGLVRPVPGAPDT
ELAFSSFLLQCFLGAVWLALSSEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLLFQ
PHADCLGALAGPAGVTLGDRKQKVLSRYLKRLQPGTLRAGRLLELLHCAHEASDPALWQH
VVQGLPGRLSFLGTRLTPPNAYVLGSALAAAGQDFSLDLRSTGIDPSGLGSLVGLSCVTH
FRAALSDAVGLWESLQQRGETKLLRAVEEKFTIEPFKAKSPKDVEDLGNLVQIQRTRSSS
EDTAGELPAVRDLKKLEFALGSVFGPQAFPKLVKILEAFSSLQHLDLDSLSENKIGDEGV
EQLSATFPRLKALETLNLSQNSITDVGACKLAEALPSLAPSLLRLSLYNNYICDVGAESL
AQVLPDMVSLRVLDVQYNKFTGAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHLQQLD
SRISLR
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactttcagaccatcctggctcgggtccggatgctgctgtccagccatcagccg
agtcaagtgcaagccctcttggacaacatgctagagaaggagcttctctcccgggagtac
cactgcgccctgctccatgagcctgatggcgaggccctggccagaaagatttccttgacc
ctgctggagaaaggagacccagacttggccctcttgaggtgggcgtggagtgggtggcag
accccggtggcggagggggaccccaactcctccaaggaccatgttgacagtggacagttt
gccaccatggagttggggcctctggaaggcgggtacctggagcttctcaacagcagtacc
gatcccttgcagctcttccacctctatgaccagacggacctggctagagaagagattgag
ctcttctcagaacccgacatggacaccatcaactgcgaacagttcagcagactgttgtgt
gacatggaaggtgacgaagagaccagggaggcttatgccaatatcgcggaactggaccag
tacgtgttccaggactcccaactggagggtctgggcaaagacattttcatcgagcatata
ggattagaagacatgatcagcgagactgtggaggtgctagaggaagcaggacagaaaagt
cagaaaagacccttcccagaggaactgcccgtggacttgaagcacaggaagctagctgag
cccctcactgtacccatggtgactggcaccttcctggtggagtcagtgagtgacccctcg
gctcttccctgcctgtcatcacctgccatcttcaacgagcagcccgcacctgtccagagc
tggctcggggagactgtcctgatgccagtacctgcctctggttccttgctgagctgcctg
agtcttcctgctggtggcatccagatcgtccccagcctcccctccctgccccaggggctc
tggcccatctcgggggctgggacaggggtgtctggcatggtcatctatcaaggggagatg
ccccaggccagccaggtgcttccttccagtggcccagccgtgcagagtctccccaagtcc
ccagatcggcctggctccaccagcccctttgccccatctgccgctgaccttcctggcatg
ccagaaccagccctgacctcccgtgcaaatatgacagaggaccagctgtcccctccccga
tgtgtggcagctcacgaggtctccagcaagcctccaaaattgcccgagagcgtgaagcag
ttctgcagctccctgcgagacaagtaccaggccgagcccgcaggcccggatggcatcctg
gtggaggtggagctggtgagggcacggctggagaagagcagcagcaagagccaggacagg
gagctggccaccccggactgggcggagcggcagctggcccgagggggtctggccgaggtg
ctgctggccgcgggtgaccgccggcggccgcgggagacacaggtgatcgctgtgctgggt
aaagcaggacaggggaagagttgctgggcccgagaagtgagccgggcctgggcctgcggc
cagctgccacagtacgacttcgtcttctacatcccctgccactgtctggaccgtgcgggg
gacacgtaccgcctgcaggatctgctcttctccctggggccccggccgcagcccgtggat
gacgaggtctttggccatatcttgaggaggcccgaccgtgttcttctcatcctggatgcc
ttcgaggggctcgaaggccaagacggtgcgtgcggccccacgtccacagagccccagtcc
ctccgggggctgctggccggcctcttccagcgtaagctgctgcgaggctgcaccctgctg
ctcatcgcccggccccggggccgcctggcccagagcctgagcaaggccgacgtcgtgttc
gaggtggccggcttctcggcccagcaggccgagacctacatgacgcgctacttggaccac
tctggggccacggagcaccgagagcgagccctggccctcctccgcggccagccgttcctc
ctcagccacagccacagccccactgtgtgccaggccgtgtgccagctctccgaggccctc
ctggagctaggcgacggggccaagctgccctccacgctcacgggactctacgtgggcctg
ctaggccctgcggcccaggacagccccccgggggccctggcgggactggccaggctggcg
tgggagctgggccgcagacaccggggcacgctgcaggagagccagttcccgtcggcggag
gtgagggcctgggccgtggccaagggcttggtgcggcccgtccctggggccccagacacg
gagctggccttctccagcttcctcctgcagtgcttcctgggggccgtgtggctggccctg
agcagtgagatcaaggacaaggagctgccacagtacttggcattgaccccaaggaaaaag
aggccctacgacaactggctggagggcgtaccgcgcttcctggccgggctgcttttccag
cctcatgccgactgcctcggagccctggcagggccggccggggtcaccttgggggacagg
aagcagaaagtgctcagcaggtacctgaagcggctgcagccagggacgctccgggccggg
cggctgctggagctgctgcactgtgcccacgaggcctcggaccctgcgctctggcagcac
gtggtgcaggggctcccgggtcgcttgtccttcctgggcacccggctcacacctcccaac
gcctacgtgctgggcagcgccttggcggcggcgggccaagacttctccctggacctccgc
agcactggcatcgacccctctggactggggagcctcgtgggactcagctgtgtcacccat
ttcagggctgcgctgagtgacgcggtggggctgtgggagtctctccagcagcgaggggag
accaagctgctccgggcggtggaggagaagttcaccatcgagcctttcaaggccaagtcc
ccgaaggacgtggaagacctgggcaacctcgtgcagatccagaggacgaggagttcctcg
gaagacacagctggagaactccctgctgtccgggacctcaagaagctggagtttgcgctg
ggctcggtcttcggcccccaggctttccccaaactggtgaagatcctcgaggctttttcc
tctcttcagcatctggacctggactcactgagtgagaacaagatcggggacgagggtgtg
gagcagctgtcagccaccttcccacggctgaaggccctggagactctcaacctgtcccag
aacagcatcaccgacgtgggcgcctgcaagctcgcagaagccctgccctccctggctcca
tccctcctcaggctgagcctgtacaataactacatctgtgatgtgggagctgagagcctg
gcacaggtgcttccagacatggtgtccctccgggtgttggatgtccagtataacaagttc
acgggcgccggggcccagcagctcgccgccagcctgagaaagtgccctcacgtggagact
ctggcgatgtggacgcccaccatcccgttcggcgtccatgaacacctgcagcagctggac
tcacggatcagcctgagatga
DBGET
integrated database retrieval system
