Canis lupus dingo (dingo): 112640775
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Entry
112640775 CDS
T08371
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
clud
Canis lupus dingo (dingo)
Pathway
clud04064
NF-kappa B signaling pathway
clud04514
Cell adhesion molecules
clud04668
TNF signaling pathway
clud04670
Leukocyte transendothelial migration
clud04933
AGE-RAGE signaling pathway in diabetic complications
clud05143
African trypanosomiasis
clud05144
Malaria
clud05417
Lipid and atherosclerosis
clud05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
clud00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
112640775 (VCAM1)
04668 TNF signaling pathway
112640775 (VCAM1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112640775 (VCAM1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
112640775 (VCAM1)
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
112640775 (VCAM1)
05143 African trypanosomiasis
112640775 (VCAM1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
112640775 (VCAM1)
05418 Fluid shear stress and atherosclerosis
112640775 (VCAM1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
112640775 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
clud04090
]
112640775 (VCAM1)
04091 Lectins [BR:
clud04091
]
112640775 (VCAM1)
CD molecules [BR:
clud04090
]
Proteins
112640775 (VCAM1)
Lectins [BR:
clud04091
]
I-type lectins (Siglecs)
112640775 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
C2-set
ig
Ig_2
V-set
C2-set_2
Ig_4
ICAM_N
Ig_5
ICAM1_3_5_D2
Ig_6
C1-set
Adhes-Ig_like
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
112640775
NCBI-ProteinID:
XP_025273269
Ensembl:
ENSCAFG00020011447
LinkDB
All DBs
Position
6:complement(49126844..49150416)
Genome browser
AA seq
748 aa
AA seq
DB search
MFSSRQQLKMPRKMVVIFGASNILWMVFAVSQASKMEIFLEPRVAAQIGDVISLTCSTTG
CETPSFSWRTQIDSPLNGKVKNEGNNSTLTMDPVSFNNEHAYLCTATCGSKKLEKGIQVE
IYSFPKDPEIQLSGPLEVGKPVTVTCLVRDVYPFDRLEMNLLNGNDLLQSKDFLEPMEKK
SLETKSLEVTFTPTNEDIGKGLVCRAQLHMDEIDFEPKERETTKELQVYISPRNTFISVT
PSMRLQEGGSVTMTCASEGLPPPQIFWSKKLDNGNLQLLSGNATLTLIAMRLEDSGTYVC
EGVNEVGKDGKEVELIVQEKPFTVEISPGPQIIAQIGDSVVLTCGVTDCESPSFSWRTQI
DSPLSGTVKVEGAKSTLTLSPVNLENEHSYLCTVTCGHKKLEKGIKVDLYSFPRDPEVEM
SGLLVDGNPVTVSCEVPNVYPSDRLEIELFKGETIIESKSFLEDMDKKSLETKSLEMTFI
PTTEDTGKVLVCLAKLHIDEMEFEPKQRQSTQTLYVNVAPRDTTVVVSPSSIVEEGSPVN
MTCSSDGLPAPNILWSRRLSNGRLQSLSEDPILTLTSAKMEDSGIYVCEGINQAGISRKE
VELIIQVAPKDIQLIAFPSESVKEGDTVIISCTCGNVPKTWIILKKKAETGDTVLKSRDG
AYTIHKVQLEDAGVYECESKNEAGLQLRSLTLDVKGRENNKDYFSPELLVLYCASSLIIP
AIGMIIYFARRANMKGSYSLVEAQKSKV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttctcatcacggcagcaactaaaaatgcctaggaagatggtcgtgatctttggagcc
tcaaatatactttggatggtgtttgctgtttctcaagcttcgaaaatggagatcttcctt
gaacccagagtcgctgctcagattggtgatgtcatttctctgacttgcagtacgacgggc
tgtgagaccccatctttctcttggagaacccagatagacagtccactgaatgggaaagtg
aagaatgaggggaacaattccacgttgaccatggaccctgttagcttcaacaatgaacat
gcttacttgtgtacagcgacttgtggatcgaagaaactggaaaaaggcattcaagtggag
atttattctttccctaaggacccagagatccaactgagtggccccctagaagttgggaag
ccagtcacagtcacgtgtttggtccgtgatgtttacccatttgacaggctggagatgaat
ttgctgaatggcaatgatctcctacagagtaaggactttctagagcctatggagaagaag
tccctggagaccaagagtttggaggtaaccttcactcctaccaatgaggatattgggaaa
ggtcttgtttgccgagcacaattacacatggatgaaattgactttgagcccaaagaaagg
gagactaccaaagagctacaagtctacatctcacccaggaacacatttatctctgtgact
ccctctatgaggctgcaagaaggcggttctgtgacaatgacatgtgccagtgaaggccta
ccacctccacagattttctggagcaaaaaattagataatgggaatctacagctcctctct
gggaatgcaactctcactttaattgctatgaggctggaagattctggaacatatgtctgt
gaaggtgtcaatgaagtcgggaaggatggaaaagaggtggaattaatcgttcaagagaaa
ccattcactgttgagatctccccaggaccccagattatcgctcagatcggtgattcagtt
gtgttaacatgtggtgtcacagactgcgagtccccatctttctcttggagaacccagata
gatagtcctctgagtgggacggtgaaggttgaaggggccaagtctacgctgaccctaagc
cctgtgaatttggagaatgaacattcttatctgtgcaccgtgacctgtggacataagaaa
ttggaaaagggaattaaggtggacctctactcattccctagagatccagaggttgagatg
agtggtctactagtggatggaaacccagtcactgtgagctgcgaggttcctaatgtgtat
ccttctgaccgactggagattgaattatttaagggggagactatcatagaaagtaaaagc
tttctggaggacatggacaagaaatctctagaaactaagagtttggaaatgaccttcatc
cccaccacagaagatactggaaaagttcttgtttgtctggctaagttacatattgatgaa
atggaatttgaacccaaacaaaggcagagtacacagacactttatgttaatgttgccccc
agggatacaaccgtcgtggtcagcccctcctccatcgtggaggaaggtagtcctgtgaac
atgacctgctctagcgatggccttccagctccgaacatcctgtggagcaggcggctaagt
aatgggcgcctgcagtctctttctgaggatccaattctcaccttaacttctgcaaaaatg
gaagattctggtatttatgtgtgtgaagggattaaccaggctggaataagcagaaaagaa
gtagaattaattatccaagttgctccgaaagacatacagcttatagcttttccttctgag
agtgtcaaggaaggagacactgtcattatctcctgtacatgtggaaatgttccaaaaact
tggataatcctgaagaaaaaagcagagacgggagacacagtgctaaagtccagagatggt
gcatataccatccacaaggtccagttagaggatgcgggagtgtacgaatgtgaatctaaa
aatgaggctggcttgcaattaagaagtttaaccctcgatgttaaaggaagagaaaataac
aaggactatttttctccagaactactcgtgctttattgtgcatcttccttgataatacca
gccattgggatgatcatttactttgccagaagagccaacatgaaggggtcatacagtctt
gtagaagcacagaaatcaaaagtgtag
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