Cyclopterus lumpus (lumpfish): 117726383
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Entry
117726383 CDS
T09199
Symbol
srgap1b
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 1b
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117726383 (srgap1b)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
117726383 (srgap1b)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117726383 (srgap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
117726383
NCBI-ProteinID:
XP_034382520
Ensembl:
ENSCLMG00005010711
LinkDB
All DBs
Position
23:complement(14564111..14591737)
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AA seq
1084 aa
AA seq
DB search
MSNSNKSKKDKEILAEYESQVKDVRAQLVEQQRCLEQQTEMRVQLLQDLQDFFRKKSEIE
TEYSRNLEKLAERFMAKTRSTKDHQQYKKDQNLLSPVNCWYLLLNQVRRESKDHATLSDL
YLNNVISRLTHISEDSARLLKRSKEIIFQLQEDLMKLLNELYTVMKTYHMYHVETISAET
KLREAERQEGRVKGLSGTGGGVEPVFGLRIEERHQRRNAARKMEKMREKRKAKYSENKLK
TLKARNEYLLTLEATNASVFKYYIHDLPDIIDCCDLGYHSSLSRALRTYLSAELSLEASR
RAGLEVLEGAVEGLDPARDRQRLLGLYPTAFCPPLRFSFQAHMGDAVTQIASQPQLQAEL
TLRLTQLQTRLASLKIENEEVKKTWGATLTTLQDMTVLEDFDVSHSFTHSPSSESVKSSV
SDGYLNKPSLAKKRANQQETELFYFTKFREYLEGSNLISKLQAKHDILKKALAEGYKAEL
LTTSRGRKNSHSKHQDSTKAIPLLVESCIRYINLHGLQHQGIFRVSGSQVEVNDIKNSFE
RGNDPLIDEESNHDINSVAGVLKLYFRGLENPLFPKERFNDLISCVRIENMYERAQCIRK
ILLGVPRATLVVMRYLFAFLNHLSQYSDENMMDAGNLAIVFGPTLLPTPDTLDQVACQAH
VNEVVKTVILNHDNIFPDTKELPGPVYEKCMTGDQYCESPFSEPGALEEAEPDGGTETQT
SDEEGEGVEAVARFDYVGRSGRELSFKKGASLQLFQRASHDWWEGRHNGNRGLVPHQYIL
VKERADGGSDALSQKADSDGGGSSSTDDKRSRSELSSPTDVRPPETYNRSVIHRRKRTDG
LFRRPLGRSNDSHCHGNGGVMERSSPPVTGHFSPRELLLGRGQGMTPPLDSPERRRRSAA
AVTMTVSRHDSLRRPEDTPIRRSSSGQHGFSDSHRSRGLDPDTLAQDIEETVTVALGELR
QLERQGCRPAPDVVLDTLDQVKNGPLNTCSSESPSPHSTPSTPGTPGTPSPLSPLSPMSP
LPGPPPGPPRPANPSPDTLGSFKPVSAARMGAPLRPPALKPKPMVPPKSSTPPLPPPPDK
SCTM
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaactccaacaaaagcaagaaggacaaagaaatcctcgcggagtacgagagccaa
gtgaaagatgttcgggcccagctggtggagcagcagcgttgtctggagcagcagacggag
atgcgagtccagctgcttcaggacctgcaggacttcttcaggaagaagtccgagatcgaa
acagaatattcccgaaacctggagaagctggcggagaggttcatggccaaaacacgcagc
accaaagaccaccagcagtacaaaaaagaccagaacctgctctctcctgtgaactgctgg
tacctgttgttgaaccaggtgaggagggaaagtaaggaccacgccaccctcagtgacctc
tacctgaacaacgtcatctcacgcctcacacatatcagcgaggactccgcccgtctcctg
aagaggagtaaggagatcatcttccagcttcaggaagacctcatgaagctcctgaacgag
ctttacaccgtgatgaagacgtaccacatgtaccacgtggagacgatcagcgcggagacc
aagctgcgggaggcggagcgccaggagggccgcgtgaagggcctgtcggggacgggcggc
ggggtggagccggtgttcggcctgcggatagaagagcgccaccagcggcgcaacgccgcc
cgcaagatggagaagatgagagagaagaggaaggcaaagtactctgagaacaagctgaag
actctcaaagcccggaacgagtacctgctgactctggaggccaccaacgcctccgtgttc
aagtactacatccacgacctgcccgacatcatcgactgctgtgacctagggtaccactcc
agtctgagccgggctctgaggacctacctatcagccgaactgagccttgaggcctccagg
agggccggtctggaggtgctggagggggccgtggagggcctggacccggcccgagaccgg
cagcgcctgctgggcctctacccgactgccttctgcccccccttacgcttcagcttccag
gctcacatgggcgacgcagtgacccagatcgcctcccagccgcagctgcaggccgagctc
accctccgcctcacgcagctgcagacccgcctggcgtctctgaagatcgagaacgaagag
gtgaagaagacctggggagcgactctgaccaccctgcaggacatgacggtgctggaggac
tttgacgtgtcccacagcttcacccatagcccgtcctccgagtcggtgaagtccagcgtg
tccgacgggtacctgaacaagccgagtctggccaagaaacgggccaatcagcaggagacg
gagctcttctacttcactaaattccgcgagtatctggagggaagtaatctcatctccaag
ctgcaggccaaacatgacatactgaagaaagctttagcggaaggatataaagctgagctg
ctgactaccagtcgcgggcggaagaactcacacagcaagcaccaggattcaaccaaagcc
ataccgctactggtggagagctgcatccgctacatcaacctgcacggtctccagcatcaa
ggcatattccgggtgtcgggatctcaggtggaggtcaacgacatcaagaactccttcgag
agaggtaacgacccgctgattgacgaggagagcaaccacgacatcaactcggtggctgga
gtgctgaagctttacttcaggggtctggagaacccgctgtttcccaaggagaggttcaat
gacctcatctcctgcgtccggatcgagaacatgtacgagagggcgcagtgcatccgcaag
atcctgctgggcgtcccgagggcgacgctggtggtgatgcgttacctgttcgccttcctc
aaccacctctcccagtacagcgacgagaacatgatggatgctgggaacctggccatcgtg
ttcggccccacgctgctgcccacgccggacacgctggaccaggtggcctgtcaggcgcac
gtcaacgaggtcgtgaagacggtgatcctgaaccacgacaacatcttcccggacaccaag
gagctgcccggcccggtctatgagaagtgcatgaccggagaccagtactgcgagagtccc
ttcagtgagccgggggcgctggaggaggccgagcccgacggcggcaccgagacccagacc
agcgacgaggagggcgagggcgtggaggcggtggcgaggttcgactacgttggccggtca
ggccgcgagctctccttcaagaagggagcgtccctgcagctcttccagcgggcgtcacat
gactggtgggaggggcgtcacaacggcaaccgcggcctggtgccccaccagtacatcctg
gtgaaggagagggccgacggcgggtccgacgcgctcagccagaaagccgacagcgacgga
ggaggaagcagcagcaccgacgacaagcggtccaggagcgagctgagctccccgaccgac
gtccggccgccggagacctacaacaggtccgtgatccaccggaggaagcggaccgacggt
ttgttccgccgccccctcggccgctccaacgacagccattgccacggtaacgggggcgtg
atggagcgcagctccccgccggtgacgggtcacttcagccccagggagctgctgctgggt
cggggtcagggcatgactccgcccctcgacagccccgagcgccgccgacgctccgcggcc
gccgtgaccatgacggtgagccgacacgattcgctgcggaggccggaggacacgcccatc
cggcgctcgagcagcgggcagcacggcttcagtgactcccatcggtccagaggcctggac
cccgacacactggctcaggacatcgaggagacggtgacggtggctctgggggagttgagg
cagttggagcgtcagggctgccggccggctcccgacgtggttctggacactctggaccag
gtgaagaacggccccctcaacacctgctcctccgagtccccgagcccccacagcaccccc
agcaccccggggacccccggcaccccgagccccctcagtcctctgagccccatgagcccg
ctccccggacctccgccgggaccccccagaccggccaacccttcccccgacaccctgggc
tcctttaaaccggtgtcagccgcccgcatgggggctccgctgcgccccccagccctgaaa
cccaaacccatggtcccgcccaagagcagcaccccgccgctgccccccccgccggacaaa
tcctgcaccatgtga
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