Cyclopterus lumpus (lumpfish): 117727053
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Entry
117727053 CDS
T09199
Symbol
esr1
Name
(RefSeq) estrogen receptor
KO
K08550
estrogen receptor alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117727053 (esr1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
clum03310
]
117727053 (esr1)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
117727053 (esr1)
Nuclear receptors [BR:
clum03310
]
3. Estrogen like
3A. Estrogen receptor
117727053 (esr1)
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Gene cluster
GFIT
Motif
Pfam:
Oest_recep
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
117727053
NCBI-ProteinID:
XP_034382940
Ensembl:
ENSCLMG00005015382
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All DBs
Position
24:11139256..11150286
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AA seq
642 aa
AA seq
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MSLRQSPVQSRQPSGPVVRPRISPALTELETLSPQHPSPPPRAHFSDMYPEESRGSGGVA
TVDFLEGTYDYAAPTPAPTPLYSHSTPGYYSAPLDSHRPPSDGSLQSLGSGPASPLVFVP
SSPRLSPFLHPPSHHYLETTSTHVYSVPSSQQSVPREDQCGTSDESYSLGESGAGAGAGA
GAGAGAGAGAGAGAGGFEMAKDTRFCAVCSDYASGYHYGVWSCEGCKAFFKRSIQGHNDY
MCPATNQCTIDRNRRKSCQACRLRKCYEVGMMKGGVRKDRGRILRRDKRRTGTSDRDKGS
KNLEPRTGPSQDGRKRSSSACAAGKSLLTSMPLDQVLLLLQCAEPPILCSRQKLSRPYTE
VTMMTLLTSMADKELVHMITWAKKLPGFLQLGLHDQVQLLESSWLEVLMIGLIWRSIHCP
GKLIFAQDLILDRNEGDCVEGMAEIFDMLLATASRFRLLKLKPEEFVCLKAIILLNSGAF
SFCTGTMEPLHDTAAVQHMLDTITDTLIHHISQSGGPVQQQSRRQAQLLLLLSHIRHMSN
KGMQHLYSMKCKNKVPLYDLLLEMLDAHRLHRPDKPGEPWFNADGEQLSTSSNDDNNNGS
SVGFSGGFSGSGSGPRVSLESPSRAPTVLQYGGSPSDCTHIL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcaggcagagcccagtgcagagcagacaacctagtggaccagtagtcagaccc
aggatcagcccagccctcacagaactggagaccctctccccgcaacatccctcgcctcca
ccacgtgcccacttcagtgacatgtaccctgaagagagccgggggtctggaggggtagcc
actgtagacttcctggaagggacatacgactatgccgctcccacccctgccccgactcct
ctttacagccactccacccctggctactactccgctcctctggactcccacagaccaccc
tcagatggcagccttcagtccctgggtagtgggccagccagtcctctagtgtttgtaccc
tccagcccccgactcagtccctttttgcacccacccagccaccactatttggaaaccacc
tcaacacatgtctacagtgtcccatccagtcagcagtcggttcccagagaggaccagtgc
ggcaccagtgacgagtcttacagtctgggggagtcgggggccggagcgggggccggagcg
ggggccggagcgggggccggagcgggggccggagcgggggccgggggctttgagatggcc
aaagatacgcgcttctgtgctgtgtgtagcgactacgcctctgggtatcactacggggtg
tggtcctgtgagggctgcaaggccttcttcaagaggagcatccagggtcacaatgactat
atgtgcccagcaaccaatcagtgcactattgacaggaatcggaggaagagctgccaggct
tgccgtcttaggaagtgttacgaagtggggatgatgaaaggaggtgtgcgcaaggaccgt
gggcgtattttgcggcgtgacaaacgacgtactggcaccagtgaccgagacaagggctct
aagaacctggagccccggactggaccctctcaggacgggaggaaacgcagcagcagtgct
tgtgctgcaggaaaatcattgctgacgagcatgcctctcgaccaggtgctcctcctgctc
cagtgtgctgagcccccgatactgtgctctcgtcagaagctgagccgaccctacaccgag
gtcaccatgatgaccctgctcaccagcatggccgataaggagctagtccacatgattacc
tgggccaagaagcttccaggtttcctgcagctgggcctccatgaccaggtgcagctgctg
gagagctcatggctggaggtgctgatgatcgggctcatctggaggtccatccactgccct
ggcaaacttatctttgcccaggacctaatactagacaggaatgaaggcgactgcgtcgaa
ggcatggcggagatctttgacatgctgctggccactgcttcccgcttccgcttgctcaaa
ctgaaacctgaggagtttgtttgtctcaaagctatcatcttgcttaactccggtgccttc
tcgttctgcacaggcacgatggagcccctccacgacaccgcggcagttcagcacatgctg
gacaccatcactgacacactcatacatcatatcagccaatcaggcggcccggttcagcag
cagtcgagacggcaggcccagctgctcctcctgctctcccacatcagacacatgagcaac
aaaggcatgcagcatctctacagcatgaagtgcaagaacaaagtgcctctgtacgacctg
ctgctcgagatgctggacgctcaccgcctccaccgcccggacaaaccaggtgagccgtgg
ttcaacgctgatggagagcaactctccaccagcagcaacgacgacaacaacaacggcagc
agtgtcggcttttcaggaggtttttccggctccggttcaggaccccgagtcagcctcgag
agtccgagcagggcccccacagtcctgcagtatggaggatccccttctgattgcacccac
atcctatga
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