Cyclopterus lumpus (lumpfish): 117729613
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Entry
117729613 CDS
T09199
Name
(RefSeq) N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3-like
KO
K07970
beta-1,3-N-acetylglucosaminyltransferase 3 [EC:
2.4.1.146
2.4.1.149
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00512
Mucin type O-glycan biosynthesis
clum00601
Glycosphingolipid biosynthesis - lacto and neolacto series
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
117729613
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
117729613
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
clum01003
]
117729613
Enzymes [BR:
clum01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.146 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase
117729613
2.4.1.149 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase
117729613
Glycosyltransferases [BR:
clum01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
117729613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
117729613
NCBI-ProteinID:
XP_034386763
Ensembl:
ENSCLMG00005009695
LinkDB
All DBs
Position
4:14484083..14488294
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AA seq
379 aa
AA seq
DB search
MRKIRARFFLLAGALGLLVLHLCKDFIDHKNIHFNINVRDDDFQIKQPTTKNTSVYSWPR
CLRNMSAANITGFSSLSGDVQDFLNYRHCRHFPMLLDLPDKCGGVDKSAEIFLLLVIKSS
PVNYDRREVLRKTWAKERLHNGVWIRRIFISGTMDTGFEKKRLNKLLELEQREYNDILQW
DFKEQFYNLTLKQILFLEWMERNCPNARFLLNGDDDVFANTNNMVEYLQGLKDNDGGKHL
FTGHLIQNVGPIRSSLSKYFIPVQVQESDSYPPYCGGGGFLLSGYTALVIFNMSQSITIL
PIDDVYMGMCLAKAGLSPSSHMGVKTAGLHIPSSTLDEYDPCYYKEVLLVHRFLPAQLYL
MWHRILDSNLKCGLSKKWL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatcagggcaagatttttcttgctggcgggagctcttggtctgttggtcctc
catctctgcaaagattttattgaccacaaaaacatccacttcaacataaatgtgagagat
gatgactttcaaataaaacaacccaccacaaagaacacctctgtgtactcctggccaaga
tgtctaagaaacatgtctgctgccaacatcacaggcttcagctctctttctggtgacgta
caagactttctcaactatagacactgtcgccatttccccatgctgctggaccttcctgac
aaatgtggaggagttgataaatctgcagaaatcttccttctgcttgtcattaaaagttct
cctgtgaactacgaccgccgagaggtgctgcgtaaaacctgggctaaagagaggttgcac
aatggtgtgtggatccgaagaatattcatctccggaacaatggatactggatttgagaaa
aagagactaaacaaactacttgagctggagcaacgggagtacaatgatatcctccaatgg
gactttaaagaacaattctacaacctcaccttgaagcagatactcttcctggaatggatg
gaaagaaactgtcctaacgctcgcttcctgctaaatggtgatgatgacgtctttgctaac
acaaacaacatggttgagtatctccaaggcctcaaggacaatgacggaggaaagcacctc
tttactggccatctgatccagaatgtggggcccatcagatcatcattgagcaagtatttt
atcccagttcaggttcaagagtcagactcatatcccccttactgtggtggtgggggcttc
ctcctgtctggctacaccgctttggtcatattcaatatgtcccagtccattactattctc
cccatcgatgatgtttacatggggatgtgtctggctaaagcaggactaagtccatcttct
catatgggagtgaagacggccggactgcacattccttccagcacgctagatgaatacgat
ccttgctattataaagaagttttactggtacacagattccttccagctcaattgtacctt
atgtggcacagaatacttgattccaatctgaaatgtggcctctcaaaaaaatggctttag
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