Cyclopterus lumpus (lumpfish): 117730405
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Entry
117730405 CDS
T09199
Symbol
zmp:0000001082
Name
(RefSeq) integrin alpha-M isoform X1
KO
K05718
integrin alpha L
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecules
clum04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117730405 (zmp:0000001082)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117730405 (zmp:0000001082)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117730405 (zmp:0000001082)
04515 Cell adhesion molecules [BR:
clum04515
]
117730405 (zmp:0000001082)
04090 CD molecules [BR:
clum04090
]
117730405 (zmp:0000001082)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117730405 (zmp:0000001082)
Cell adhesion molecules [BR:
clum04515
]
Integrins
Integrin alpha subunits
117730405 (zmp:0000001082)
CD molecules [BR:
clum04090
]
Proteins
117730405 (zmp:0000001082)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
ITGAX-like_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
VWA_2
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
117730405
NCBI-ProteinID:
XP_034387994
Ensembl:
ENSCLMG00005005020
LinkDB
All DBs
Position
1:14576162..14589869
Genome browser
AA seq
1196 aa
AA seq
DB search
MHEQRIFLLTYMVAVAIPVSLTFNIDTTPQDVYIGEQNDFFGYKVLQFMSGTDKGIIVTA
PLRLNGSGSMCKPDQNQQIQCFTPEDLSLTDTTIPVKHFGLSIAEDAKRSEFTVCSPSVV
HECNENSYVNGVCYTITNQLQQISSFKTAFQECTKKTVDLVFLFDGSRSMSEDEFNKNKD
FIVDIMNSLKNSSIKFAAVQFSTEYRKVFDFNDYQAGRDSDKLQKEPQLRSLTNTHKALK
FVLDEILDNSESGASPDATKVVVLITDGDPSDSDRNGIIKRYDEKNIIRFVIGVKDAKLE
KFRAIASDPKDKNAFKIENYDRLKEVLENFQKKIFKMEGSKVSRAGDMTNEMSQSGFSAV
FYNDTLILGSVGSNSWRGSLQHRHEQKDTQIDDPHMQMDSYMGYSISVGEKNSAPLYFSG
APRFEHIGQVVLFRLNGKNWTAAQRINGDQIGSYFGAELCSVDVNSDGNTDFLLVGAPLF
YHPHEKKEGQIYVYTLTDEMQLKHELIVTASSMGRFGSTISSLADLNGDRLRDVAVGAPL
ENDNTGTVYIYLGDRHRGIRSTFSQRIMGQKIKPVLRFFGQAIDGHIDLGEDGLPDIVVG
SQGAAVVLRSRPVFNVNARLSFIPNKISTDNIDCLGNTDETLPMVTLTACFEMVETTKSK
PAAMSSGLNISYMLCVDPMRPIFRGFFSQTNKKSRNLTSIYELRDEDTCFNYSVYMPKCV
KDTSSPISIRLNFFQVDNESASAVLNMDSKMSQADVEVPFEKHCRKNDTCIAELDVEFNF
MTPTLLVAEEQYFQVLVKLSNHGDDSYNTSLTMHYPRGLSFSRMTFKKATRPTIHSCQDL
EGVLDKTICGISRPVFRSRSAATFMTSFHIMNEYEWDDTITMNITGESDNTNSTRIAFLT
KSIKVQFKIKMAVMVKEDSINYLNFTTEDTGPKKIVATYKIENLGFKDFPVNVSLVFPTK
LEQNFEMTNYHVFVQQNKTHCTGITDTQSEYCSPEKYCKIIVCDSFILEKESPTEFTLSG
DVQFRDLKQHAANIAFLKRYTGDGGEVKFKSFIHVNYDKQRYVLDSHKQQEKSEPTMKWT
EVQVEFIILPDQRLIMLTGVGLGLLFLIIITVIMFKLGCFKRRTMEYYQEQEDGAALQPG
SATQPTSAPTSGLVSQSETNGQHDKPTEEISLLDDGEAKSNSTTADTEEELHELAD
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagcagcgcatcttcctgctcacctacatggtggctgttgccatccctgtctct
ttgactttcaacattgatacgacacctcaagatgtctatattggggaacaaaatgatttc
tttggatacaaagtgcttcaattcatgtctggcacagacaaagggataatcgtaactgca
ccgctgcggctaaatggatctgggagcatgtgtaaaccggaccaaaaccaacagatccag
tgcttcacccctgaagatctttctctaacagacacaacaataccagtcaagcactttggc
ctgtcgatagctgaagatgccaaacgctccgaattcactgtgtgcagtccaagtgtagtc
catgaatgcaatgagaactcctatgtgaacggcgtgtgctacaccatcacgaatcaactt
cagcaaatctcctctttcaaaactgctttccaggaatgcacaaaaaagacagtggacctt
gtctttctttttgacggatcacggagtatgagcgaggacgagttcaacaaaaacaaagat
ttcatcgtggatataatgaacagccttaagaactcatcaatcaagtttgcagcagttcag
ttctccaccgaatatcgaaaggtttttgacttcaacgactaccaagctggtagggatagc
gataaacttcaaaaagaaccacaattgaggagcctcaccaacacacataaagccctcaaa
ttcgtgttggatgaaatcttggacaactcagagtcaggtgcttctcctgatgcaactaaa
gttgtggtactaatcacagatggagatcccagcgattcagacagaaatggcattattaaa
agatatgatgagaaaaacataattcgctttgtaattggggtcaaagatgcaaaactggaa
aaattcagagccattgcttcagatccaaaagacaaaaatgccttcaaaattgagaactat
gacagactgaaagaagtactggaaaactttcagaaaaagatctttaaaatggaaggctcc
aaagtctctcgggcaggcgatatgaccaatgaaatgtctcagagcggattcagtgctgtc
ttctacaacgatacactgattctgggttcagtgggatcaaacagctggcgtggttctctc
caacaccgtcatgaacaaaaagatacacaaattgatgatccacacatgcagatggactcc
tacatgggatactctatttctgttggagagaagaatagcgctcctctatatttctccggg
gcaccaagatttgagcacattggacaggtcgtacttttcagactcaatgggaagaactgg
acggcagcccagagaataaatggggaccagattggttcttactttggtgcagagttgtgc
tcagtagatgtcaactcagatggtaacaccgatttcttgctggtgggagctccactgttt
taccatcctcatgagaagaaagaaggccagatctacgtctacacactgacggatgagatg
caactgaaacatgaattgattgtgactgcatcatcgatggggagatttggctccaccata
tccagtcttgcagatttaaatggagatcgactacgagacgtagctgttggagcccccctt
gagaatgataacacagggactgtgtacatctacctgggtgacagacacagagggatacgc
agcactttcagccagagaatcatgggacagaaaataaagcctgtgctgagattctttgga
caagcaattgatgggcacattgacctcggagaggacggactcccagatattgttgtcgga
tcacagggcgctgctgttgtcttaaggtccaggcccgtctttaatgtcaatgcccgtctg
tcttttataccgaataagataagtactgacaacattgactgtctgggcaacacagatgaa
actttaccaatggttaccctgacagcctgctttgaaatggtagaaacaacaaagagcaaa
ccagcggcaatgagctccggcctgaacatctcgtacatgctctgtgtggatccaatgaga
ccaatatttcgaggtttcttcagtcaaaccaacaagaaatctagaaatctcacctctatc
tacgagctgagggatgaagatacttgcttcaactactcagtctacatgccaaaatgtgtg
aaagacacatcatcccccatcagcatcagattaaactttttccaagttgacaatgagagt
gcgagtgccgtcctgaatatggacagcaaaatgtctcaggctgatgttgaggttcccttt
gaaaaacattgtagaaaaaatgacacctgtattgccgaacttgacgtggagttcaacttc
atgactccaacattattggtggcagaagaacaatacttccaagtgcttgttaaactgtcc
aatcatggtgatgactcctacaacaccagcctaacaatgcactatcccagaggcctctcc
ttttctaggatgacttttaaaaaggcaacaagaccaacaatccacagctgccaagatctc
gagggagtacttgacaaaaccatatgtggcatcagccgtcctgtgtttcgcagcagatca
gcagcaacattcatgacttctttccacatcatgaatgagtatgagtgggacgacacaatt
acgatgaacattactggtgaaagtgataatacaaactccaccaggattgctttcctgacc
aaaagcatcaaagtgcaatttaaaattaaaatggcagtaatggtgaaagaagactctatc
aactatctgaacttcacaacagaggatactgggcctaaaaaaatagttgctacatacaag
atagaaaatcttggtttcaaggactttcctgtcaacgtgtccctggtcttcccaactaaa
ctggaacaaaactttgaaatgacaaactatcacgtctttgttcagcagaacaaaactcac
tgcacaggcattactgatacacaatctgaatactgttcgccagaaaaatattgtaaaatc
atagtgtgtgacagtttcatcctggagaaagaatcacccactgaatttacattgtcagga
gacgtacaattcagggatctcaaacagcatgcagcgaatattgcctttcttaaacgatat
actggagatggcggagaggttaaatttaaaagctttatacatgtcaactatgacaagcaa
cgatatgtgctggactctcataaacaacaggagaagtccgaaccaacaatgaaatggact
gaagttcaggttgagttcataatcctcccggatcaacgcctgatcatgttaactggagtt
ggactgggactgttgtttctgatcataatcaccgtcatcatgtttaagttgggctgcttt
aagaggagaacgatggagtattatcaagagcaggaggacggcgctgctctacagcctggc
agcgcgacacagcccacatcggcccccaccagtgggctagtcagccaatcagagactaac
ggccaacatgacaaacctacagaggaaatctcccttcttgatgatggtgaggcaaaaagc
aattccacgacagctgatacagaggaggaactgcatgagttggcggactga
DBGET
integrated database retrieval system