KEGG   Cyclopterus lumpus (lumpfish): 117730405
Entry
117730405         CDS       T09199                                 
Symbol
zmp:0000001082
Name
(RefSeq) integrin alpha-M isoform X1
  KO
K05718  integrin alpha L
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04514  Cell adhesion molecules
clum04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    117730405 (zmp:0000001082)
 09140 Cellular Processes
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    117730405 (zmp:0000001082)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:clum04147]
    117730405 (zmp:0000001082)
   04515 Cell adhesion molecules [BR:clum04515]
    117730405 (zmp:0000001082)
   04090 CD molecules [BR:clum04090]
    117730405 (zmp:0000001082)
Exosome [BR:clum04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   117730405 (zmp:0000001082)
Cell adhesion molecules [BR:clum04515]
 Integrins
  Integrin alpha subunits
   117730405 (zmp:0000001082)
CD molecules [BR:clum04090]
 Proteins
  117730405 (zmp:0000001082)
SSDB
Motif
Pfam: VWA FG-GAP ITGAX-like_Ig_3 Integrin_A_Ig_1 Integrin_A_Ig_2 VWA_2 FG-GAP_3
Other DBs
NCBI-GeneID: 117730405
NCBI-ProteinID: XP_034387994
Ensembl: ENSCLMG00005005020
LinkDB
Position
1:14576162..14589869
AA seq 1196 aa
MHEQRIFLLTYMVAVAIPVSLTFNIDTTPQDVYIGEQNDFFGYKVLQFMSGTDKGIIVTA
PLRLNGSGSMCKPDQNQQIQCFTPEDLSLTDTTIPVKHFGLSIAEDAKRSEFTVCSPSVV
HECNENSYVNGVCYTITNQLQQISSFKTAFQECTKKTVDLVFLFDGSRSMSEDEFNKNKD
FIVDIMNSLKNSSIKFAAVQFSTEYRKVFDFNDYQAGRDSDKLQKEPQLRSLTNTHKALK
FVLDEILDNSESGASPDATKVVVLITDGDPSDSDRNGIIKRYDEKNIIRFVIGVKDAKLE
KFRAIASDPKDKNAFKIENYDRLKEVLENFQKKIFKMEGSKVSRAGDMTNEMSQSGFSAV
FYNDTLILGSVGSNSWRGSLQHRHEQKDTQIDDPHMQMDSYMGYSISVGEKNSAPLYFSG
APRFEHIGQVVLFRLNGKNWTAAQRINGDQIGSYFGAELCSVDVNSDGNTDFLLVGAPLF
YHPHEKKEGQIYVYTLTDEMQLKHELIVTASSMGRFGSTISSLADLNGDRLRDVAVGAPL
ENDNTGTVYIYLGDRHRGIRSTFSQRIMGQKIKPVLRFFGQAIDGHIDLGEDGLPDIVVG
SQGAAVVLRSRPVFNVNARLSFIPNKISTDNIDCLGNTDETLPMVTLTACFEMVETTKSK
PAAMSSGLNISYMLCVDPMRPIFRGFFSQTNKKSRNLTSIYELRDEDTCFNYSVYMPKCV
KDTSSPISIRLNFFQVDNESASAVLNMDSKMSQADVEVPFEKHCRKNDTCIAELDVEFNF
MTPTLLVAEEQYFQVLVKLSNHGDDSYNTSLTMHYPRGLSFSRMTFKKATRPTIHSCQDL
EGVLDKTICGISRPVFRSRSAATFMTSFHIMNEYEWDDTITMNITGESDNTNSTRIAFLT
KSIKVQFKIKMAVMVKEDSINYLNFTTEDTGPKKIVATYKIENLGFKDFPVNVSLVFPTK
LEQNFEMTNYHVFVQQNKTHCTGITDTQSEYCSPEKYCKIIVCDSFILEKESPTEFTLSG
DVQFRDLKQHAANIAFLKRYTGDGGEVKFKSFIHVNYDKQRYVLDSHKQQEKSEPTMKWT
EVQVEFIILPDQRLIMLTGVGLGLLFLIIITVIMFKLGCFKRRTMEYYQEQEDGAALQPG
SATQPTSAPTSGLVSQSETNGQHDKPTEEISLLDDGEAKSNSTTADTEEELHELAD
NT seq 3591 nt   +upstreamnt  +downstreamnt
atgcatgagcagcgcatcttcctgctcacctacatggtggctgttgccatccctgtctct
ttgactttcaacattgatacgacacctcaagatgtctatattggggaacaaaatgatttc
tttggatacaaagtgcttcaattcatgtctggcacagacaaagggataatcgtaactgca
ccgctgcggctaaatggatctgggagcatgtgtaaaccggaccaaaaccaacagatccag
tgcttcacccctgaagatctttctctaacagacacaacaataccagtcaagcactttggc
ctgtcgatagctgaagatgccaaacgctccgaattcactgtgtgcagtccaagtgtagtc
catgaatgcaatgagaactcctatgtgaacggcgtgtgctacaccatcacgaatcaactt
cagcaaatctcctctttcaaaactgctttccaggaatgcacaaaaaagacagtggacctt
gtctttctttttgacggatcacggagtatgagcgaggacgagttcaacaaaaacaaagat
ttcatcgtggatataatgaacagccttaagaactcatcaatcaagtttgcagcagttcag
ttctccaccgaatatcgaaaggtttttgacttcaacgactaccaagctggtagggatagc
gataaacttcaaaaagaaccacaattgaggagcctcaccaacacacataaagccctcaaa
ttcgtgttggatgaaatcttggacaactcagagtcaggtgcttctcctgatgcaactaaa
gttgtggtactaatcacagatggagatcccagcgattcagacagaaatggcattattaaa
agatatgatgagaaaaacataattcgctttgtaattggggtcaaagatgcaaaactggaa
aaattcagagccattgcttcagatccaaaagacaaaaatgccttcaaaattgagaactat
gacagactgaaagaagtactggaaaactttcagaaaaagatctttaaaatggaaggctcc
aaagtctctcgggcaggcgatatgaccaatgaaatgtctcagagcggattcagtgctgtc
ttctacaacgatacactgattctgggttcagtgggatcaaacagctggcgtggttctctc
caacaccgtcatgaacaaaaagatacacaaattgatgatccacacatgcagatggactcc
tacatgggatactctatttctgttggagagaagaatagcgctcctctatatttctccggg
gcaccaagatttgagcacattggacaggtcgtacttttcagactcaatgggaagaactgg
acggcagcccagagaataaatggggaccagattggttcttactttggtgcagagttgtgc
tcagtagatgtcaactcagatggtaacaccgatttcttgctggtgggagctccactgttt
taccatcctcatgagaagaaagaaggccagatctacgtctacacactgacggatgagatg
caactgaaacatgaattgattgtgactgcatcatcgatggggagatttggctccaccata
tccagtcttgcagatttaaatggagatcgactacgagacgtagctgttggagcccccctt
gagaatgataacacagggactgtgtacatctacctgggtgacagacacagagggatacgc
agcactttcagccagagaatcatgggacagaaaataaagcctgtgctgagattctttgga
caagcaattgatgggcacattgacctcggagaggacggactcccagatattgttgtcgga
tcacagggcgctgctgttgtcttaaggtccaggcccgtctttaatgtcaatgcccgtctg
tcttttataccgaataagataagtactgacaacattgactgtctgggcaacacagatgaa
actttaccaatggttaccctgacagcctgctttgaaatggtagaaacaacaaagagcaaa
ccagcggcaatgagctccggcctgaacatctcgtacatgctctgtgtggatccaatgaga
ccaatatttcgaggtttcttcagtcaaaccaacaagaaatctagaaatctcacctctatc
tacgagctgagggatgaagatacttgcttcaactactcagtctacatgccaaaatgtgtg
aaagacacatcatcccccatcagcatcagattaaactttttccaagttgacaatgagagt
gcgagtgccgtcctgaatatggacagcaaaatgtctcaggctgatgttgaggttcccttt
gaaaaacattgtagaaaaaatgacacctgtattgccgaacttgacgtggagttcaacttc
atgactccaacattattggtggcagaagaacaatacttccaagtgcttgttaaactgtcc
aatcatggtgatgactcctacaacaccagcctaacaatgcactatcccagaggcctctcc
ttttctaggatgacttttaaaaaggcaacaagaccaacaatccacagctgccaagatctc
gagggagtacttgacaaaaccatatgtggcatcagccgtcctgtgtttcgcagcagatca
gcagcaacattcatgacttctttccacatcatgaatgagtatgagtgggacgacacaatt
acgatgaacattactggtgaaagtgataatacaaactccaccaggattgctttcctgacc
aaaagcatcaaagtgcaatttaaaattaaaatggcagtaatggtgaaagaagactctatc
aactatctgaacttcacaacagaggatactgggcctaaaaaaatagttgctacatacaag
atagaaaatcttggtttcaaggactttcctgtcaacgtgtccctggtcttcccaactaaa
ctggaacaaaactttgaaatgacaaactatcacgtctttgttcagcagaacaaaactcac
tgcacaggcattactgatacacaatctgaatactgttcgccagaaaaatattgtaaaatc
atagtgtgtgacagtttcatcctggagaaagaatcacccactgaatttacattgtcagga
gacgtacaattcagggatctcaaacagcatgcagcgaatattgcctttcttaaacgatat
actggagatggcggagaggttaaatttaaaagctttatacatgtcaactatgacaagcaa
cgatatgtgctggactctcataaacaacaggagaagtccgaaccaacaatgaaatggact
gaagttcaggttgagttcataatcctcccggatcaacgcctgatcatgttaactggagtt
ggactgggactgttgtttctgatcataatcaccgtcatcatgtttaagttgggctgcttt
aagaggagaacgatggagtattatcaagagcaggaggacggcgctgctctacagcctggc
agcgcgacacagcccacatcggcccccaccagtgggctagtcagccaatcagagactaac
ggccaacatgacaaacctacagaggaaatctcccttcttgatgatggtgaggcaaaaagc
aattccacgacagctgatacagaggaggaactgcatgagttggcggactga

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