Cyclopterus lumpus (lumpfish): 117730512
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Entry
117730512 CDS
T09199
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 3-like isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117730512
Membrane trafficking [BR:
clum04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
117730512
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117730512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_2
SH3_9
Flg_hook
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
117730512
NCBI-ProteinID:
XP_034388140
Ensembl:
ENSCLMG00005018577
LinkDB
All DBs
Position
5:15951470..15982193
Genome browser
AA seq
1109 aa
AA seq
DB search
MSSHAKVKKDKEIIAEYETQVKEIRNQLVEQFRCLEQQSESRLQLLQDLQEFFRRKAELQ
LEYSRGLDKLAERYSAKIRTSREHHHFKKDQNLLSTVNCWYLVLDQTRRESRDHATLSDI
YNNNVIVRLAHVGEDVIRLFKKSKDIGVQMHEELVKVTNELYTVMKTYHMYHTESLSAES
KLKEAEKLEEKHIGKANDTGSSLLRYGHDERPQRRSSVKKMEKMKEKRQAKYSENKLKCT
KARNDYLLNLAATNALVAKYYIHDVSDFIDCCDLGFHASLARTLRTYLSAEYSLETSRHE
GLDLLEGAVDAMDVRGDKLKFMDAHSQIFCPPARFDCQPHMGDEVCQVSAQQPVQTELLM
RYHQLQSRLATLRIENEEVRKTLDATMQTLQDMLTLEDFDVSEAFQHSQSTESVKSASSD
SYMSKANIVKRRANQHETEGFYFTKYKEYLNGSNLIIKLQAKHDLLKQTLGEGERAGYGT
TRPPTLPPKPQRMRKSRPRSVFNRKLFNGNMEAFIQDSGQPIPVVVESCVRYINLYGLQQ
QGIFRVPGSHVEVNDIKNAFERGEDPLVDDQSDHDINSVAGVLKLYFRGLENALFPKERY
LDLISTTKLDSGAERAHHLQQIIVTLQRSVIIVMRYLFAFLNHVSQYSDENMMDPYNLAI
CFGPTLMPIPDDQDPVACQAHVNEIIKTVIIHHELIFPAQRELDGPVYEKCMAGGEEYCE
SPHSEPGTLDEVDNGTGPNTSDEELEQIEAIAKFDYVGRSPRELSFKKGASLLLYLRASE
DWWEGRHNGVDGLIPHQYIVVQDMDDAFSDSRTDSVASSGPHHDERASSRNDRRSPCEHT
PERQFGAALGRVRVRSDGAVGPRHRNGADSHSPTRAADQPPRVMPRPCSPHKVAVSRGPA
DSPEKRRLAAFGSAGCINHSDRRAFVESHSQRSSPSTTRHASLGDHKTLEAEALAEDIEK
TMNTALHELRELERQNVAKHTPDVVLDTLEPLKHPSGAQDPPGSPLHTMVIRDPDAAQRR
SSSSSSETMSTFKPAISARRPNAPLRPPPVRPVRPAPVIGQGQGPHRSSSSSSSGLGSPG
ITPTDRVFPKPPSPSPSTSSSSSDKQGNM
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcatgcgaaagtcaagaaggacaaagagattattgccgagtatgaaacacaa
gtgaaagagatccgtaaccagctggtggagcagttccgttgtctggagcagcagtctgag
tcccggctgcagctgctgcaggacctgcaggagttcttccgtcgaaaggccgagctccag
ctagagtactccagaggcctggacaaactggccgagcgctactctgctaagatccgtacc
tcaagagagcaccatcacttcaaaaaggaccagaatctcctatccactgttaactgctgg
tatttggtcttggaccagactaggcgggagagcagagaccatgccactctcagcgacatc
tacaacaacaacgtcattgtccgtctggcacacgtgggcgaggatgtcatcagactcttc
aaaaagagcaaagacatcggggtgcagatgcacgaggagttagtgaaagtcaccaatgag
ctctacactgtgatgaagacgtaccacatgtaccatactgagagtctcagtgctgagagc
aagctaaaggaggcagagaaactggaagagaagcacatcggcaaggccaatgacactggt
tccagcctgctgcggtacggtcatgatgaacggccacagcgacggagctccgtcaagaag
atggagaaaatgaaggagaagagacaagccaagtactctgaaaacaagctgaaatgcaca
aaagcccggaacgactatcttctcaatctggcagcgaccaatgcgctggttgccaaatac
tacatccatgatgtctcagactttatagattgttgcgacttaggtttccatgctagtctg
gcacgcactttgagaacctacctgtcggcagagtatagtctggagacttctcgccacgaa
ggtttggacttgctggagggagcggtagatgccatggacgtcagaggagacaagctgaag
tttatggacgcacacagccagatcttctgtcctccagcacgctttgactgtcagccacac
atgggggatgaggtgtgtcaggtgagtgcacagcagcctgtccagacagagctcctgatg
cgctaccaccagctgcagtctcgtctggccacgctgaggatagaaaatgaagaggtgagg
aagacccttgacgccaccatgcagacccttcaggacatgctcactctggaggacttcgat
gtttcggaggccttccagcacagccaatccacagagtcggtcaaatcggcttcctctgac
tcctacatgagcaaggcaaacattgtgaagagacgagccaatcagcatgagactgagggc
ttctactttactaaatacaaggagtacttgaatggcagcaatctcattatcaaactgcaa
gccaagcatgaccttctgaagcagacgctcggagaaggggagagggctggatatggaaca
acaaggccccccactcttccccctaaaccccagagaatgcggaagtctagacctcgctcg
gtttttaaccgtaagctgtttaacggcaatatggaggccttcattcaggactcagggcag
cctataccagtggtggttgagagctgtgttcgatacatcaacctatatggtcttcagcag
caaggtatatttcgagttccaggctcccatgtcgaagtcaacgatattaaaaatgcattt
gaaagaggagaagatccactggtggatgatcagtccgatcatgacatcaactctgtggca
ggcgttcttaagctctacttcagggggctggaaaacgcactcttccctaaagagcgttac
ctcgacctcatatccacaaccaagcttgattcaggcgcagaaagggctcatcaccttcag
cagataattgtgactctccagcggtccgtgatcatcgtcatgagatacctatttgcattt
ctaaatcatgtatctcagtacagtgatgagaacatgatggacccctacaacctggctatt
tgctttggacccacgttgatgccaataccagatgaccaagaccccgtggcttgccaggcg
catgtgaacgagatcattaagaccgttatcatccaccacgagctcatcttcccggcccag
cgtgagttggacggacctgtgtatgaaaagtgcatggcgggtggggaagagtactgtgaa
agcccccacagtgagccaggaactcttgatgaggtagacaatggcaccggacccaacact
agcgatgaagagttggagcagatcgaggccattgcaaagtttgactatgtgggccgaagt
ccgagagagctttccttcaagaagggagcatctctgcttctctacctgcgagcttctgag
gactggtgggagggccgacataacggtgtggatgggctgattccacatcagtacattgtg
gtacaagacatggatgatgcattctcggatagcaggactgatagtgtggccagcagtgga
ccccatcacgatgaaagagcgtcgtccagaaacgaccgccgatctccatgtgaacacaca
cctgaacgccaatttggagcagcactgggaagggtgagggtgcgatcagatggagctgta
ggtccgcgccacaggaacggcgccgacagtcacagccccaccagagctgcagaccagccc
cctcgggttatgcctcggccctgcagcccacacaaagtagcagttagcaggggcccagca
gacagtccggagaaacggcgtctcgctgcatttggcagtgctggctgcatcaaccactcc
gacagaagggccttcgtggaaagccactctcagcgatcttcacccagcacaactcggcac
gcaagtttaggagatcacaaaactcttgaggctgaagcacttgctgaggacatagagaaa
acaatgaatacagctctccatgagttgcgtgagctggagcgacagaatgtagcgaaacat
acccctgatgttgtgttggacacattggaacccctcaaacaccccagtggagcccaggat
ccacctggcagccctctccacaccatggtgatcagggatccagatgcagcccagcgacgt
agcagcagcagctcctccgagactatgagcacttttaaacctgctatatcagcacgtaga
ccgaatgcaccgctaaggcccccgcctgtcagacctgtccggcctgctcctgtgattgga
cagggccagggaccacaccgctccagcagctctagctcctctggtcttggcagcccaggc
atcacacccaccgacagggtctttcccaaaccaccttccccatcaccatccacctcctcc
tcatcctcagacaaacaaggtaacatgtag
DBGET
integrated database retrieval system
