Cyclopterus lumpus (lumpfish): 117733044
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Entry
117733044 CDS
T09199
Symbol
tfe3a
Name
(RefSeq) transcription factor E3a isoform X1
KO
K09105
transcription factor E3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
117733044 (tfe3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117733044 (tfe3a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
117733044 (tfe3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MITF_TFEB_C_3_N
HLH
DUF3371
Motif
Other DBs
NCBI-GeneID:
117733044
NCBI-ProteinID:
XP_034392255
Ensembl:
ENSCLMG00005000535
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All DBs
Position
7:complement(24664417..24685913)
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AA seq
558 aa
AA seq
DB search
MSAVGSDQNRNRTAADPELQEAGVLQPQTVFVILDSAETLNLVRVESGIVADIEVDSLLP
SDCDTFYQIKSQPISFSSSAAVSSSSSCSSSLPSRVLMRQDLMRQQALEEEQKEVQQQLL
LRSVDSSSPISVSVSSSCRPPAQVPVEVLKVQTHLENPTRYHIQQAQRQQVRQYLSDTKT
ANQDSAGPSPSHSPHLGPAPKLQLADVFRKTEMEETVIDDIISLESSLNDEFLTLIESGL
QLANTSSEQKRKRSSVCVCVCVCVCVCLHTRSCVCVKSEKMRILVLLPDHEKRRIKAEMP
VSGNVLDMYGGMATPTITVSNSCPADLQAIKREVHEGDTKALIKERQKKHNHNLIERRRR
FNINDRIKELGALIPKCSDPESRWNKGTILKASVDYIHKLQKEQQRARELEDRQRRLENT
NQALLLRIQELELQTRLHSLSSSSSPLPTTTSSSSSLDLQALLSPTLPHPFSPCPLVNPC
LGLDALSFVDLAEPRGASAVFSTHLMCEAELTELQSLGDILMEEGGGGGAVVVSDPLLSC
GASKASSRRSSFSMDEDL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgtcggctcggaccagaaccggaaccggaccgcagccgatccagagctgcag
gaggccggggtcctgcagccgcagaccgtgttcgtcatcctggactcggctgaaactctc
aacctggtccgggtggagtctggaatcgtcgctgacattgaggtcgacagtttgcttccc
tctgactgtgacacgttctaccagatcaagagccagccaatcagtttcagttcgtcggca
gcagtttcctcctcttcatcatgttcttcctccctgccatccagggttctgatgcggcag
gatctgatgcggcagcaggccctggaggaggagcagaaggaggtgcagcagcagctcctc
ctccgctcagtagactcctcctcccccatctccgtctctgtgtcttcctcctgcagacct
cctgctcaggtccctgtggaggtgctgaaggtgcagactcacctggagaaccccaccagg
tatcacatccagcaggctcagaggcagcaggtccgtcagtatctctcagacacaaagaca
gccaatcaagactcagctggaccgtcaccaagccactccccccacctgggccccgccccc
aaactacagcttgcagacgtcttcagaaaaacagagatggaagagaccgtcatcgatgac
atcatcagccttgagtcaagcctgaatgacgagtttctgacgctgatcgaatctggatta
cagctcgccaacacgtcgtccgaacaaaagaggaagagaagcagtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtttacacactcgctcgtgtgtctgtgtgaagtcagagaag
atgaggattttagttttactgccggaccatgagaagaggaggattaaagccgagatgccg
gtgtcggggaacgtgctggacatgtatggagggatggccacgcccaccatcaccgtcagc
aacagttgcccggccgacctgcaggccatcaagagagaggtgcatgaaggggacaccaaa
gctctgatcaaagagagacaaaagaaacacaaccacaacctcatcgagcggaggaggaga
ttcaacatcaacgatcggatcaaagaactcggagctctcatccccaaatgcagtgacccg
gagtcgaggtggaacaaaggaaccatcctgaaggcgtcggtggattacatccataaactc
cagaaggaacagcagagagctcgagagctggaggaccgacagaggaggctggagaacacc
aaccaggcccttctgcttcgcatacaggagttggagcttcagactcgcctccacagcctc
tcctcctcctcctcccctctgcccaccaccacctcctcctcctcctccctggatctccag
gccctgctgtctcccactctgcctcaccctttctccccctgccccctggtgaacccctgc
ctgggtctggacgccctgagcttcgtggatctggccgagcctcgaggagcctcggccgtc
ttctccacacacctgatgtgtgaggcggagctgacggagctccagagcctgggagacatc
ctgatggaggagggagggggcgggggggcggtggtggtgtccgaccccctgctgtcctgt
ggagcctcaaaggccagcagcaggaggagcagcttcagcatggacgaggacctctga
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