Cyclopterus lumpus (lumpfish): 117733734
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Entry
117733734 CDS
T09199
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00531
Glycosaminoglycan degradation
clum01100
Metabolic pathways
clum04142
Lysosome
Module
clum_M00076
Dermatan sulfate degradation
clum_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117733734 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117733734 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
clum02042
]
117733734 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117733734 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
117733734 (si:dkey-72l14.3)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
117733734 (si:dkey-72l14.3)
Bacterial toxins [BR:
clum02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
117733734 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Enzymes
117733734 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
clum00537
]
Enzymes
117733734 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
Motif
Other DBs
NCBI-GeneID:
117733734
NCBI-ProteinID:
XP_034393466
LinkDB
All DBs
Position
7:complement(8095769..8099047)
Genome browser
AA seq
442 aa
AA seq
DB search
MAWAEPRSRPDPKPKPKLTPHSPRTQDTFSSAIHQVQPPVVLPLLLLLAAFADLGIAGPL
QPACPPLLSGQPFIIFWGIPDSSCSGRPDPRSFGMEQEGRVAVFYEDTLGNYPYFIDKDT
PVNGGLPQHTRLDNHLQKTQQDLEAALPAPRYLGLGVLRWAEWVPQWSRNRERQAMYLEA
SRDLLKTFFPNWTPEEVEKWSQVDFEAAAQSVMTETLREVKRLRPKALWGFSPYPSCYNG
DPTQTMLANYTGQCPAAEMALNDELLWLWKRCSALYPLLTLEKLQCGTSGARLHLSSQIR
EALRVSSLTGTASDLPVFPLVKSVYASTNTFLSQADLVSTIGESAAMGTAGVVIWGKSET
KTERECQDLAEFVHKVLGPYSINVTAATRLCSASLCQGKGRCVRQNPESSVYLHLPLTSE
VVEKVSEKTSLVLNPTSTIRHK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgggccgagccacggtcccgtccagacccaaagcctaaaccaaaactaacacct
cacagtccacgcactcaggacactttttcatcagctatccatcaagtccagcctccagtt
gtactgcccctccttcttctgctggctgcctttgctgacctgggtattgctggtcctctg
cagccggcttgcccccctctcctttctggacagcctttcatcatcttctggggcatcccc
gactcttcctgctcaggtcggccagatcctagatctttcgggatggaacaggagggccgc
gtggccgtcttttatgaggacacgctggggaactacccttactttatagacaaagacaca
ccggtcaatggggggctaccacagcacacacggctggacaaccacctccagaagacacag
caggacttggaggcagctttacctgccccaaggtaccttgggctgggggtgctgcgctgg
gcagagtgggtcccccagtggtcaaggaaccgagagaggcaggcgatgtatctggaggca
tcgagagacctgctaaaaactttctttcctaactggaccccggaggaggtggaaaagtgg
tcacaggtggacttcgaagcagcagcccaatcagtaatgacggaaactcttcgagaggtc
aaaaggttaaggcccaaagcattatggggcttctccccttaccccagctgctacaatggc
gatcccacccaaaccatgttggccaattacaccggccaatgccctgctgcggagatggcc
ctcaacgacgagcttctgtggctatggaaacgatgctccgccctgtaccctctgctcacc
ctggagaagctgcagtgtgggacctctggagccaggcttcacttgtccagtcaaatcaga
gaagcactacgagtatcatctctgactgggactgcgtcggatcttcctgtgttcccattg
gtcaagagtgtctatgcatcaactaacactttcctgtcacaggcagacctggttagcacc
ataggagagagtgctgccatgggaacagctggagttgtcatctgggggaagagtgagact
aagacagagagagagtgtcaagacctggcagagtttgtccacaaggtcctgggaccctac
tccatcaacgtaaccgcggcaactcgactctgctcagcctctctctgccagggaaagggt
cgttgtgtccgtcaaaatccagagagctccgtctacctccacctcccactgacgtccgaa
gtggtggagaaggtgtcggaaaagacatcattagtcctgaatcccacttctacaataaga
cacaaatag
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