Cyclopterus lumpus (lumpfish): 117733939
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Entry
117733939 CDS
T09199
Symbol
qars1
Name
(RefSeq) glutamine--tRNA ligase isoform X1
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00970
Aminoacyl-tRNA biosynthesis
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117733939 (qars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clum01007
]
117733939 (qars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clum03016
]
117733939 (qars1)
Enzymes [BR:
clum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
117733939 (qars1)
Amino acid related enzymes [BR:
clum01007
]
Aminoacyl-tRNA synthetase
Class I (A)
117733939 (qars1)
Transfer RNA biogenesis [BR:
clum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117733939 (qars1)
Prokaryotic type
Other AARSs
117733939 (qars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA_synt_1c_R2
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-GeneID:
117733939
NCBI-ProteinID:
XP_034393786
Ensembl:
ENSCLMG00005003995
LinkDB
All DBs
Position
7:22321666..22330800
Genome browser
AA seq
776 aa
AA seq
DB search
MADTLTLFTSIGLSEQKAKETLKNEALSSALKDAIIQARRTCGASGVDKAIGTLLYSMAS
RLKDPKRLAFLSDGIVQCKICTELQLAAALEFVKSHPQDPINQGEFDEACGVGVAITPEQ
IEEAVESLIKKHKEQLLKERYHFNMGLLMGEARSALKWADGKVVKNEVDLQVLHLLGPKT
EADLEKKVKPQKAKVAASEGKLKKEEVAVTDEGMTGEGRSLMEQLRGEALKFHKPGENYK
TEGYVVTPNTMDLLKKHMELTGGQIRSRFPPEPNGILHIGHAKAINFNFGFAKANNGICF
LRYDDTNPEKEEEKYFTAIRDMVEWLGYEPFAVTHASDNFQQLYDLAVDLVRRGHAFVCH
QKGEELKGHNAPPSPWRDRPAEESLVLFDRMKKGLFAEGEATLRMKMVMEDGKLDPVAYR
IKYTPHHRTGDEWCIYPTYDYTHCLCDSIENITHSLCTKEFQARRSSYFWLCNALDVYCP
VQWEYGRLNLTYTVVSKRKIIKLVETGVVRDWDDPRLFTLTALRRRGFPPEAINNFCARV
GVTVSQTTTEPHLLEACVRDVLNDTAPRAMAVLQPLRVTIANLPEGSKSDVRVPDFPANE
AKGSHAVPFSSTIFIEQSDFREVMEKGYKRLTPDQPVGLRHAGYVISFQKVIKDAQGKVV
ELEVTCCSSETAEKPKAFIHWVSQPLTCEVRLYERLFLHKHPEDQSVVPNGFLSDINPDS
LHVISGALVDTSVKRAKALDRFQFERVGYFSLDPDSTADKLIFNRTVTLKEDPGKI
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacattgacgctcttcacgtccattgggctcagcgagcagaaagcgaaggag
acgctgaaaaatgaagcgctgagttccgccctgaaggacgcgatcattcaggctcggcgt
acctgcggggcatcaggagtggacaaagccatcggtacgttgctgtacagcatggcgtct
cgccttaaggaccccaagcgcctggcgttcctttcggacggcatagttcagtgcaaaatc
tgcacagagctgcagctggcagctgcactagaatttgtgaagagtcaccctcaggacccc
atcaaccagggagagttcgacgaggcgtgtggagtgggagtggccataacgccggagcag
atcgaagaagccgtggagtcgttgatcaagaagcacaaggaacagctgctgaaggagagg
taccacttcaacatgggactgctgatgggagaagctcgctctgctctgaaatgggctgac
gggaaggtcgtcaaaaacgaggtggacttgcaggtcctgcacctcctgggtcccaagacg
gaggccgacctggagaagaaagtcaagccccagaaagccaaagtcgctgccagtgaggga
aagctgaagaaagaggaggtggcggtgactgatgaggggatgaccggggagggaaggtct
ctgatggagcagctcagaggagaagcactgaagttccataaaccaggagagaactataaa
actgagggctacgtggtcacaccaaacactatggacttgcttaaaaagcacatggagctc
accggtggacagatccgttctcgttttcctcccgagcccaacgggatccttcacattgga
cacgccaaagccatcaacttcaactttggttttgcaaaggcgaacaacggaatttgtttc
ttgcggtacgacgacacgaatccagagaaggaggaggagaaatacttcacggccatccgg
gacatggtggagtggctcggctacgaaccgttcgccgtcacgcacgcgtccgacaacttt
cagcagctctacgacctcgccgtggacctcgtccgcaggggccacgcgttcgtgtgccac
cagaaaggggaggagctgaagggccacaacgcccctccgtcgccgtggagggaccggccc
gccgaggagtcgctggtgctgttcgaccggatgaagaaggggctgttcgccgagggcgag
gccacgctcaggatgaagatggtcatggaggacgggaagctggaccccgtggcgtaccgg
atcaaatacacgccgcatcatcgcacgggggacgaatggtgcatctaccccacttacgac
tacacccactgcctgtgtgactccattgaaaacatcacgcactcactctgcaccaaagag
tttcaggccaggcgctcgtcgtatttctggctgtgcaacgctctggacgtgtactgtccg
gtccagtgggagtacggtcgcttgaacctcacctacacggtggtgtcaaagaggaagatc
atcaagctggtggagaccggcgtcgtcagagactgggacgacccgcgactcttcaccctg
acggcgctgaggaggagaggcttcccgccagaggccatcaacaacttctgtgcgagggtc
ggagtcacggtttcccagacgacgacggagccccacctcctggaggcgtgcgtgagggac
gtgctgaacgacacggcgcccagagccatggccgtgctgcaaccgctccgagtcaccatc
gccaacctgcccgagggctcgaagtcagatgtgcgagtgccggactttcctgccaacgag
gccaaaggcagccacgccgtcccgttcagcagcaccatcttcatcgagcagagcgacttc
agagaggtgatggagaagggctacaagcggctgaccccagaccagcctgtaggtctgagg
cacgccgggtatgtcatctctttccagaaggtcatcaaggacgctcagggtaaagtggtg
gagctggaggtgacctgttgcagctctgagaccgcggagaaaccaaaggccttcatccac
tgggtcagccagccgttgacgtgtgaagtgcgcctttatgaaagactgttcctgcacaaa
catccggaggatcagtctgttgtgcccaacggcttcctgagtgacataaatcccgactcc
ctgcatgtgatcagcggcgccttagtggacacctccgtgaagagggcgaaggctttagac
agattccagtttgagagagtcggctacttctccctggaccccgacagcaccgcggataag
ctcatcttcaacagaacggtcaccctcaaagaagaccccgggaagatctga
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