Cyclopterus lumpus (lumpfish): 117735022
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Entry
117735022 CDS
T09199
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04020
Calcium signaling pathway
clum04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117735022
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117735022
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117735022
Ion channels [BR:
clum04040
]
Ligand-gated channels
Glutamate (ionotropic)
117735022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117735022
NCBI-ProteinID:
XP_034395304
Ensembl:
ENSCLMG00005020923
LinkDB
All DBs
Position
8:complement(14062011..14133851)
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AA seq
1543 aa
AA seq
DB search
MNETDPKSIIKSICDLMTEHWLQGVVFGDDTDQEAIAQILDFISAQTHIPILGVRGGSSM
IMAAKDDDSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFVTKVRSTTEN
SFVGWELQEVLLLDMSVDDGDAKIQNQLKKLGSPVILLYCTKEEANTIFEVAHSVGITGY
GYTWIVPSLVAGDTIVVPAEFPTGLLSVSYDEWDYGLEARVRDGVAIITMATSAMVMDRG
PHTLLKSECHGAPDKKTPISGNPNEVLRYLMNVTFEGRNLSFSEDGYQMHPKLVIILLNK
ERQWERVGKWENGSLSMKYHVWPRYELYGGAATREDDHLSIVTLEEAPFVIVEDVDPLSG
TCMRNTVPCRKQLKTLNQTKDSGIYIKRCCKGFCIDILKKIAKQVKFTYDLYLVTNGKHG
KKINGTWNGMVGEVVLKNAHMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSP
SAFLEPFSADVWVMMFVMLLLVSAMAVFIFEYFSPVGYNRCLADGKEPHGPSFTIGKAIW
LLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVTGLS
DKKFQSPNDFSPPFRFGTVPNGSTERNIRNNYPEMHGYMTKFHQRNVNEALQSLKAGKLD
AFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIAIQKESLWKRHVDLAILMLFGDG
EMEELESLWLTGICHHEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFICEHWFYWQLR
FCFMGVCSGQPGFVFSISRGIYSCIHGVQIEEKSSSALNSPSGTMNNTHSNIMRLLRTAK
NMASLSGVNGSPHSALDFIRRESSVYDISEHRRSLAGHSDCKPPYLPEDNMFSDYISEVE
RTFGNLHLKDSNLYQDHYLHQHGSTLGLSGPPVNRPHSLGSASSLEGGMFDCDSPGGGVA
PIFTTQPCSALTHRNMSKFDLLSGQTPPPGQGFKGGLPDLYGKFSFKGGASSSTFIPGHG
YCGGRGEDEGNIRSDVSDISTHTVTYGNLEGNAKKRKQYRDSLKKRPASAKSRRELDEIE
LGYRRKPYHISHHHYHGHRSTSPPLLPPERKRGGGGGGGNNDGNTYLFREKESVRDFYLD
QFRPKEGVPQWEHVDLTEGPGNRDGGVGACTTLVPTDDFLKGKPKKSDSKSGGGSGGLAG
GEWECRNCRASGGGLAKQMSMHGGGGGGGYGGGMSCGSSGGGGNSRPSSATCMRCEGCKK
TGNLYDISEDNNHLLEQMGGGKGGGGGPQSQSQGQQRRKGGGFGKPLRRQHSYDAFVDLQ
KEESGGMGSLMGGLGGGGGMSGVGMGGMLPPPRSVSLKEKERYVEGTSPFAHIFERHGGS
ERERERDRDPLFYGGEGRKGPGSPFGLFRGGEGLHRRSVGERDIRDRDRSLMEGGGVGGF
SLSKSLYPDRVNQNPFIPTFGDDQCLMHGAKQYYMKKQQHTTSYLPASATAGVISNVTPR
FPKELSLGGMNHHGSMLGVGPPRPFNGSNGHVYEKLSSIESDV
NT seq
4632 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagacagaccctaagagcatcatcaagagcatctgtgacctcatgacggagcac
tggctgcagggtgtggtgttcggggatgacaccgaccaggaggccatcgcccagatcctt
gacttcatttcagcccagacccatatccccatcctcggagtccgcgggggctcctccatg
atcatggctgccaaggacgacgactccatgttcttccagttcggcccctccatcgagcag
caggcctcggtcatgctgaacatcatggaggagtacgactggtacatcttctccatcgtc
accacgtactacccggggtaccaggactttgtcaccaaggtccgcagcaccaccgagaac
agctttgtgggctgggaactgcaggaggtcctactgctggatatgtcggtggatgacgga
gatgccaagatccagaaccagctgaagaagctcgggagccccgtcattcttctctactgc
acaaaagaggaggccaacaccatcttcgaggtggcccactctgtcgggatcactggctac
ggctacacgtggatcgtaccctcgctggtagctggagatactattgtagtgcctgcagag
ttccccacagggctgctctccgtgtcctacgacgaatgggactacggcctcgaggcccgc
gttcgcgacggcgtggccatcatcaccatggcaacctccgccatggtgatggaccgcggt
cctcacaccctgctgaagtccgagtgccacggggccccggacaagaagacccccatctca
ggcaaccccaacgaagtgctcaggtacctgatgaatgtgacgtttgagggacgtaatctg
tcgttcagcgaggacggataccagatgcaccccaagctggtcatcattctgctcaacaag
gagcggcagtgggagagggtgggtaaatgggagaatggctccctgtccatgaagtaccac
gtgtggcctcgctatgaactctacgggggcgcggcaacgcgggaggacgaccacctgtcc
atcgtgacgctggaggaggccccgttcgtcatcgtggaagacgtggatccgctgagcggg
acctgcatgaggaacactgtgccctgccggaagcagctcaaaacactcaatcagacgaag
gattctgggatctacatcaagcgttgctgtaagggattctgcatcgacatcctgaagaag
atcgccaagcaagtgaagttcacctacgacctctacctggtcacgaacggcaaacacggc
aagaagatcaatggaacgtggaacggcatggtgggggaggttgtgttaaaaaacgcccac
atggccgtcggctccttgaccatcaacgaggagaggtcggaggtcatcgacttttccgtg
cccttcatcgagacgggcatcagcgttatggtctcccgtagcaacggcacagtttcgccc
tcggccttcttagagcccttcagcgcggatgtgtgggtgatgatgttcgtgatgctgttg
ctggtgtcagcaatggctgtgtttatattcgagtacttcagccctgtgggctacaaccgc
tgtctggctgacggcaaagagcctcacggtccatccttcaccatcggcaaggccatctgg
ctgctgtggggtctggtctttaacaactctgtgccggtgcagaaccccaaaggcaccacc
agtaagatcatggtgtcggtgtgggccttctttgccgtcatcttcctggcctcctacact
gccaacttggctgccttcatgatccaggaggaatacgtggaccaggtgactggtctgtca
gacaaaaagttccagagtcccaacgacttctcgcctccctttcggtttggtaccgtccca
aacgggagcacggagagaaacatcaggaacaactatccagaaatgcacggctacatgaca
aagttccatcagaggaacgtcaacgaggctctgcagagtctcaaggccggcaaactagac
gctttcatttacgacgcggccgtactcaactacatggccggcagggacgagggctgcaag
ctagtgaccatcggcagcggctacatcttcgccaccacggggtacggcatcgccatccag
aaggagtcgctgtggaagaggcacgtggacctggccatcctcatgctgtttggagacggt
gagatggaggagctggagtccctgtggctgacggggatctgccaccacgagaagaacgag
gtgatgtccagccagctggacatcgacaacatggccggtgtcttctacatgcttggtgcc
gccatggcgctgtcgctcatcaccttcatctgcgagcactggttctactggcagctgcgc
ttctgcttcatgggcgtctgctccggccagcccggctttgtcttctccatcagcaggggc
atctacagctgcatccacggggtgcagattgaggagaagagcagctcggccttgaactcc
ccatcaggcaccatgaacaacacccattccaacattatgcgcctcttgcgcaccgccaag
aacatggcctccctgtcgggggtgaacggctcaccacacagcgccctggacttcatccgc
cgggaatcctccgtttatgacatctctgaacaccggcgcagcctggcgggccactcggac
tgcaagccgccttacctcccggaggacaacatgttcagcgactacatcagcgaggtggag
aggacgttcggcaacctccacctgaaggacagtaacctgtaccaggaccactacctgcac
caacacggctccacgctcgggctcagcgggccaccggtcaaccggccccacagtctgggc
agtgcgagttctctggagggcggcatgttcgactgtgacagcccgggcggaggggtggcc
cctatattcaccacccagccctgctcagcattgacccacaggaacatgagcaagtttgac
ctgctgtctggacagactcctccccccggccagggcttcaagggagggctgccggacctg
tacgggaagttctccttcaagggaggtgcctcgagttccacatttatcccggggcatggc
tactgcggagggagaggagaggacgaaggaaatatacggtccgatgtctcggacatttcc
acgcacacagtaacttatggaaatctggagggtaatgccaagaagcgcaaacaataccgc
gatagcctgaagaagaggccggcctctgccaagtccagacgggagctggacgagatcgag
ctgggctacaggaggaaaccctaccacatcagccaccaccactaccacggccaccgctct
acctccccaccacttttgccccctgaacggaagagaggaggtggaggtggaggaggaaac
aacgatgggaacacctatctcttcagagaaaaggagagtgtgagggatttttatttggac
cagtttcgtcccaaagagggcgtccctcagtgggaacacgtggacctgacagagggcccg
gggaatagagacggaggagtgggggcctgcaccaccctggttccaacggatgacttcctt
aagggcaaacccaaaaagtcagattcaaagagtgggggaggatctggtgggctggcaggg
ggagagtgggagtgcaggaactgtcgggccagcgggggaggattggccaagcagatgtcc
atgcatggaggcgggggtggtggagggtatggtggtggcatgagctgcgggtcctcggga
ggtggaggaaacagccgccccagctctgcgacctgcatgcgctgcgagggctgtaaaaaa
acaggaaacctctacgatatcagcgaggacaacaaccacctcttggaacagatgggggga
gggaaaggtgggggaggaggcccccagtctcaatctcagggccagcagaggaggaagggc
ggaggcttcggcaaaccactgaggcggcagcactcgtatgacgcatttgtcgaccttcag
aaagaggagtcaggtgggatgggaagtctgatggggggtctcggaggtggcggagggatg
agcggtgtcggtatgggagggatgctgcccccacccaggagcgtcagcttgaaggagaaa
gaacgctacgtggagggcaccagccccttcgcgcacatatttgagcgccacgggggctcg
gagagagaaagggagcgagacagggacccgttgttttacggaggtgagggccgcaaagga
cctggctcgccattcggcctgttcagaggcggcgagggcctccaccggcgctccgtcgga
gagagagacatacgagacagagataggtctttgatggaaggaggaggtgtgggagggttc
tctttatccaaatctctttaccccgacagggtaaaccaaaacccctttattcctacgttt
ggcgacgaccagtgtctgatgcacggggccaaacaatattacatgaaaaagcaacagcac
acgacgtcatatctgccagcgtccgccacagccggggtgatatccaacgtgaccccccgg
ttcccgaaagagctcagcctcggtggaatgaaccaccacggctccatgctgggggtcggc
cccccgcgtcccttcaatggaagcaatggccatgtgtacgagaaactctccagcatcgag
tctgacgtgtga
DBGET
integrated database retrieval system
