Cyclopterus lumpus (lumpfish): 117736154
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Entry
117736154 CDS
T09199
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1-like
KO
K02599
Notch 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117736154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
NOD
Notch
Ank_3
Ank_5
Ank_4
NODP
EGF_3
DL-JAG_EGF-like
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
117736154
NCBI-ProteinID:
XP_034397158
Ensembl:
ENSCLMG00005019635
LinkDB
All DBs
Position
9:6042130..6080127
Genome browser
AA seq
2510 aa
AA seq
DB search
MHIFFVKLTFLLSLIALTRGLRCSMPTESCLNHGRCEATPDGNGECKCRDGYVGSRCQFR
DPCTSSPCLNGGMCRAVSKGNTVDFNCTCRLGFTDHRCLIPVNNVCISSPCRNGGTCELE
SLKTYKCRCPPGWSGKLCQQADPCASNPCAYGGQCSAIESHYICTCTPFFSGKTCKQDVN
ECDVSQSPCKHGGLCINEVGSYECQCPPEYTGRHCESRYLPCNPSPCHNGGTCIQRGETS
YECSCVPGFTGKNCNHNIDDCPGHECQNGGTCVDGVNTYNCQCKPEFTGQLCTEDVDECQ
LMPNACQNGGTCHNTYGSYQCVCVNGWTGDDCSENIDDCASAACHPESTCHDRVASFYCE
CPLGHTGLLCQLNDACISNPCQKGSNCDTNPVSGNHFCTCPSGYIGASCDQDVDECSLGS
NPCEHAGKCINTKGSFQCKCQRGYVGPRCELDINECMSNPCMNEATCLDQIGDFHCICMP
GYEGEFCEIDTDECAHSPCLNNGNCIDKINAFHCQCPTGFTGNLCQIDIDECASTPCKNG
AKCTDGPNRYTCECTEGYSGRHCETDINECYSDPCHYGNCIDGLASFSCHCNPGYTGRLC
ETNINECLSQPCRNGGTCQDRENAYICSCPKGTTGINCEINIDDCKSNPCDYGTCIDKIN
GYECACEPGYTGTMCNINIDECAINPCHNGGTCIDGIHGFTCACPDGYQDPTCFSQVNEC
LSNPCIHGHCEDKINGYNCLCDSGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCTCR
MGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCVLPYTGENCETLMAPCSSKPCKY
GGVCQESEDYQSFSCVCPEGWQGQTCEVDIKECVKNPCRNGATCQNTLGSYQCACKPGFS
GRNCESNIDDCKPNPCSNGGLCKDEVNGFLCTCLAGFRGTKCEEDINECESNPCKNGANC
TDCVNSYTCTCPPGFSGIHCENNTPDCTESSCFNGGSCMDGINTFTCLCPPGFTGSYCQH
DINECDSKPCLNGGTCHDSYGTYKCTCPHGYTGLNCQNLVRWCDSSPCKNRGTCWQRGTT
YSCECETGWTGLYCDVPSVSCEVAAKQRGVDVAHLCRNSGQCLDAGNVHYCHCQVGYTGS
YCEEQVDECTPNPCQNGATCTDFLGGYTCKCLPGYVGTNCSDEINECFSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINIDDCNPFTDPVTKEPKCFNKGKCVDRVGGYHCICSAGYV
GERCEGDINECLSNPCDPRGTHSCIQLTNNYRCDCRTGYTGQRCDTVFDGCKGKPCRNGG
TCAVASNTPHGFICKCPPGFTGSTCEYDAQACGSLNCRNGGTCISGHKSPKCLCTPSFTG
PECQYPTDSPCNSNPCYNGGMCEYTSEAPFYHCVCPANFNGLRCHILDYSFQGGFGHDIL
PPSEAEAPCDIPLCEEAKHNKYCDVLCNNHACGWDNGDCSLNFDDPWKNCSASLQCWRYF
NDGKCDSQCDNAGCLYDGFDCQKLEGQCNPLYDQYCKDHYADQHCDQGCNNAECRWDGLD
CANNMPEKLAVGQLVLVVHISPEQLLNNSFGFLRELSRVLRTNVVFTKDANGETMVYPYY
GNEHELKKYNVKRSADSWAEVPGKVLNVVKRSVRGAACGAARRREELDHLQIKGSVVHFE
VDNRQCSPAVHRVFQSTNDAAAFLGALASSGXLDVPYTIEAVFSGVDPKPSQDLYPIYLV
LGGIGMLAFIGVGMVAARKRRNEHGRLWLPEGFKTTETSKKKRREPVGEDSVGLKPLKNT
SDISLMDDNQNEWGEDEPSDAKRSRQFDEQAILEVDDQTDHRQVTQQHLDAADLRIPSIA
PTPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGA
NLHNQTDRTGETALHLAARYARSDAAKRLLEASADANVQDNMGRTPLHAAVAADAQGVFQ
ILIRNRATDLDARMHDGTTPLILAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAV
NNVEAVIVLLKNSANKDMQNNKEETPLFLAARXGSYETAKVLLDHFANREITDHMDRLPR
DIAQERMHHDIVRLMDDYNLVRSPHMHGGSLGTTLSPPLCSPXGYLGGMKQPMAHGKKAR
KPSAKGIGCKEGKDMKVKKKNLHDGKPGSLLDGSCVLSPVDSLESPHGYVSDVASPPMMT
SPFQQSPSVSLNHLQGMSDPHLSVNHLVMPNKQELARMQFDPLPPRLTHLTVSGSGGQGA
INGQCDWLSRMHGSMSQPGQFNPMRGAPGGQGGLHPGGQHGMMASLHNGHPAGLSQMMTY
QGIQSTRLGPQPHIMQQQMQQMQNLQQLQQQQQQSIQLQHQNSNTTNSQSFISGELSSPE
LQQGTGNSSMXIHTILPQETQIMPSSINQSMPSTQFLTPPSQHSYSGPMDNTPNHQVQVP
DHPFXDPIPRLPDQVSSSSPHSNMSDWSEGISSPPTSMQAQIAHLPEQFK
NT seq
7533 nt
NT seq
+upstream
nt +downstream
nt
atgcatattttctttgtgaaactaactttcttgttgtcgctgatagcactaacacgaggt
ctaagatgctccatgcccacggagtcgtgtttgaaccatgggaggtgtgaagcaactcca
gatggcaacggggagtgcaagtgccgggacggatacgtggggagcaggtgccagttccgc
gacccgtgcaccagctcgccgtgcttaaacggcggcatgtgccgcgccgtgtccaagggc
aacacggtggacttcaactgcacctgcagactgggcttcaccgaccaccgctgcctgata
cccgtcaacaacgtctgtatcagctcgccgtgtcgcaacggaggcacctgcgagctggag
agtctcaagacgtacaagtgccgctgcccacctggatggtcaggtaagctgtgccaacaa
gccgacccctgtgcctcaaacccgtgcgcctacggcggccagtgctccgccatcgagtct
cactacatctgcacctgcacgcccttcttctccgggaagacgtgcaagcaggacgtcaac
gagtgcgacgtgagccagtcgccctgcaagcacggcgggctgtgcatcaacgaggtcggc
agctacgagtgccagtgcccgccggagtacacggggaggcactgcgagagccgctacctg
ccctgcaacccgtcgccctgccacaacggaggcacctgcatccagaggggagagaccagc
tacgagtgctcctgcgtgccaggtttcacaggaaaaaactgcaaccataacatcgacgac
tgtccgggtcacgagtgtcagaatggaggcacatgtgtggacggagtcaacacctacaac
tgccagtgcaaaccagagttcacaggtcagctctgcacggaggacgttgacgagtgccag
ctgatgcccaacgcctgccaaaatggcggcacgtgccacaacacctacggcagctaccag
tgcgtgtgcgtgaacggctggaccggcgacgactgcagcgagaacatcgacgactgcgcc
agcgccgcgtgccacccggagtccacgtgtcacgaccgcgtcgcttctttctactgcgaa
tgccccctcggccacacaggactgctgtgccagctgaacgacgcctgcatcagcaacccg
tgtcagaaaggctccaactgcgacaccaaccccgtcagcgggaatcacttctgtacctgc
ccgtccgggtacatcggagcctcctgcgatcaggacgtcgacgagtgctcactgggttcc
aacccgtgcgagcacgcggggaagtgcatcaacaccaagggttcgttccagtgtaagtgc
cagcggggttacgtcgggccgcgctgcgagctggacatcaacgagtgcatgtccaacccg
tgtatgaatgaggccacctgcctggaccaaataggagacttccactgcatctgcatgccg
ggttacgagggggagttctgcgagatcgatacggacgagtgcgcccacagcccctgtctg
aacaacggcaactgtatcgacaagatcaacgccttccactgccagtgccccacaggcttc
actgggaacctttgccagatagacatcgacgagtgtgccagcacgccgtgcaaaaatggc
gccaagtgcacagacggacccaacagatacacctgcgagtgcactgaaggttactccggg
aggcactgtgagacggacatcaacgagtgttactccgacccgtgccactacggcaactgc
atcgacggcctggcctccttcagctgccactgcaaccccggatacaccggccggctgtgc
gagaccaacatcaacgagtgcctgagccagccgtgcaggaatggaggcacctgccaggac
cgggagaacgcctacatctgcagctgccccaagggcaccaccggaatcaactgcgagatc
aacatcgacgactgcaagagcaatccctgtgactacgggacctgcatcgacaagatcaac
ggctacgagtgcgcctgcgagcccggctacacgggcaccatgtgtaacatcaacatcgac
gagtgcgccatcaacccgtgccacaacggcggcacctgcatcgatggcatccacggcttc
acctgcgcgtgtccagacggttaccaggaccccacctgcttctcccaggtcaacgagtgc
ctcagcaacccctgcatccacggccactgcgaggacaagatcaatggctacaactgcctg
tgtgattctggctggagcggtaagaactgcgacatcaacaacaacgagtgtgaatccaac
ccatgtatgaatggaggcacctgcaaggacatgaccagcggctacgtttgcacctgtcgc
atgggcttcaccggaccaaactgccagaccaacatcaacgaatgtgcctccaacccctgc
ctcaaccagggcacgtgcattgacgacgtcgccggctacaagtgcaactgcgtcctgcct
tacacgggagagaactgtgagaccttgatggctccctgcagctccaaaccctgcaagtat
ggcggagtgtgtcaggagtcggaggactatcagagcttctcctgcgtctgtccggaagga
tggcaaggccaaacatgtgaggtggacatcaaagagtgcgtgaagaatccctgtcgcaac
ggagcaacctgccagaacactctgggcagctaccagtgtgcctgcaagccgggcttcagc
ggacgcaactgtgaaagcaacatcgacgactgcaagcccaacccgtgcagcaacgggggc
ctctgcaaggacgaggtgaacggcttcctgtgcacctgcctcgccggctttcggggcacc
aagtgcgaggaggacatcaacgagtgcgagagcaacccgtgcaagaacggggccaactgc
accgactgcgtcaacagctacacctgtacctgcccgccgggcttcagcgggatccactgc
gaaaacaacacccccgactgcactgagagctcctgcttcaatggcggctcctgtatggac
ggcatcaacaccttcacgtgtttgtgtccgccgggcttcactgggagctactgccagcac
gacatcaacgagtgtgactccaagccctgcctgaacggcggcacctgccacgacagctac
ggcacctacaagtgcacctgcccacacggatacaccggcctcaactgtcagaacttggtc
cgctggtgcgactcgtcgccctgtaagaaccgggggacttgctggcagaggggaaccacc
tacagctgcgagtgcgagaccggctggacgggactctactgtgacgtcccgagcgtctcc
tgcgaggtggcagccaagcagagaggggtcgacgtcgcccacctgtgtcgtaactcgggt
cagtgtctggacgcgggaaacgtccactactgccactgccaggtcggatacactgggagt
tactgtgaggagcaggtggacgagtgcaccccgaacccctgccagaacggagccacctgc
accgacttcttaggcggatacacctgcaagtgtctgccaggatacgtggggaccaactgc
tctgacgagatcaatgaatgtttctcccaaccgtgccagaacgggggcacctgcattgac
ctgatcaatacctacaaatgctcctgtccccggggaacccaaggtgtgcactgtgagatc
aacatcgacgactgcaacccgttcaccgacccggtcaccaaagagcccaagtgcttcaac
aaagggaagtgcgtggatcgagtcggaggctaccactgcatctgctcggcggggtacgtg
ggggagcgctgcgagggggacatcaacgagtgcctctccaacccctgtgacccgcggggc
acgcacagctgcatccagctcaccaacaactaccgctgcgactgtcgcaccggatacaca
ggtcaacgctgtgacacggtgttcgatggatgcaaggggaaaccgtgtcgcaatggaggg
acctgcgccgtggccagtaacacgccacatggcttcatctgcaaatgtccccctggcttc
actggctccacgtgcgaatacgacgcccaggcctgcggcagcctcaactgccgcaacgga
ggcacctgcatctcgggccacaagagtcccaagtgcctgtgcaccccgtcgttcaccggg
cccgagtgccagtatcccaccgacagcccctgtaattccaacccctgctacaacggcggc
atgtgcgaatacacctccgaggcgccgttctaccactgcgtgtgccccgcgaacttcaac
ggcctccgctgccacatcctggattacagcttccagggcgggttcggccacgacatcctg
ccgccgtccgaggcggaggcgccgtgcgacatcccgctgtgcgaggaggcgaagcacaac
aagtactgcgacgtgctctgtaacaaccacgcgtgcggctgggacaacggcgactgctcg
ctcaacttcgacgacccgtggaagaactgctcggcctcgctgcaatgctggcggtacttc
aacgacgggaagtgcgactcgcagtgtgacaacgccggatgtctctacgacggcttcgac
tgccagaaactggagggacagtgcaaccctctttatgaccaatactgcaaggaccactac
gccgaccagcactgcgaccagggctgcaacaacgccgagtgcaggtgggacggcctggac
tgtgccaacaacatgcccgagaagctcgccgtgggccagctggtcctggtggtccacatc
tccccggagcagctcctcaacaactccttcggcttcctgcgcgagctgagccgcgtcctc
cgcaccaacgtggtgttcacgaaggacgccaacggcgagacgatggtgtacccgtactac
gggaacgagcacgagctgaagaagtacaacgtgaagcgctcggcggactcgtgggccgag
gttcccggcaaggttctgaatgtggtgaagaggagcgtgcgtggcgcggcgtgcggcgcc
gccaggaggcgagaggaactggatcacctgcagatcaaaggttcggtcgtccacttcgag
gtggacaaccgccagtgctctccagcagtccaccgagtgttccagagcaccaatgacgcc
gcggctttcctcggggctctggcctccagtggcnaactggatgttccctacaccatcgaa
gccgtttttagcggagtggaccccaagccttcacaggacctctacccgatctacttggtc
ctgggcggcatcgggatgctggccttcatcggagtgggaatggtggctgcccgaaagcgc
cgcaacgagcacgggcgcctgtggctccccgagggcttcaagaccacggagaccagcaag
aagaagagacgcgagcccgtcggagaggattcggtgggattaaagccactgaaaaacacc
tcggacatttcactgatggatgacaaccagaacgagtggggagaagacgagccctcggat
gcaaaacgctccaggcagtttgacgagcaggcgatactggaggtggacgaccagacggac
caccgccaggtgacgcagcagcacctggacgccgctgacctgcgcatcccctccatcgct
cccactccgcctcagggcgagattgagaatgactgcatggatgtcaacgtccggggacca
gacggattcacgccgctgatgatcgcgtcctgcagcggcggaggtttagaaacgggcaac
agcgaggaagaggaggacgcctccgccaacgtgatcaacgacttcatctaccagggcgcg
aacctccacaaccagacggaccgcacgggtgaaaccgccctgcacctggccgcccgctac
gctcgctccgacgccgccaagcgcctgctggaggccagcgccgacgccaacgtccaggac
aacatgggcaggacgcctctgcacgctgcggtggccgctgacgcccagggggtgttccag
attctgataaggaaccgcgccacggacctggatgcccgcatgcatgacggcaccacaccc
ctgatcttggctgccaggctggcagtggagggcatggtggaggagctcataaactgccac
gccgacgtcaacgccatcgacgatttcggtaaatcagccctgcattgggccgcagccgtg
aacaacgtggaggctgtgattgtgcttctcaagaacagtgccaacaaggacatgcagaac
aacaaggaggaaactcctctattcttggctgccagangaggaagctacgagactgccaag
gtcttactggaccactttgccaaccgagagataaccgaccacatggaccggctacccaga
gacattgcacaggagcgaatgcatcacgacatcgtgcggctgatggacgactacaacctg
gtacggagtccccacatgcacggagggtcactcggcaccaccttgtcgcccccgctgtgc
tcgccanacggctacctgggcggcatgaagcagcccatggctcacggcaaaaaggcacgc
aagcccagcgccaagggcatcggctgcaaggagggcaaagacatgaaggtgaagaagaag
aatttgcatgacgggaagcctgggagcctcctggacggctcctgtgtgctgtcgccagtc
gactcgttggagtctccgcacggctacgtctccgacgtggcctcgccgcccatgatgacc
tctcctttccagcagtcgccgtccgtatccctgaaccacctgcagggcatgtctgatcca
cacctgtccgtaaaccacctggtgatgccaaacaagcaggagctggctcggatgcagttt
gacccgctgcctccgcgtctcacccacctgaccgtgtccggctccggtggccagggcgcc
ataaacggccagtgtgattggctgtccaggatgcacggcagcatgagccagccgggtcag
ttcaaccccatgaggggagctcccggcggtcagggaggcctgcacccgggagggcagcac
gggatgatggcgtccctccacaacggccaccccgccggcctatcacagatgatgacctac
caggggatccagagcaccaggctgggtccgcagccccacatcatgcagcagcagatgcag
cagatgcagaacctgcagcagctccagcagcagcagcagcaaagcatccagctgcagcac
cagaactcgaacacgaccaacagccagagcttcatcagcggggagctcagttccccggag
ctccagcagggcaccggcaactccagcatgnccatccacaccatcctgccgcaggagacc
cagattatgccctcctccatcaaccagtctatgcccagcacccagttcctcaccccaccc
tcccagcacagctattcaggccccatggacaacaccccgaaccatcaggtccaggtgcct
gaccaccctttcnntgaccccatcccccggctccccgatcaggtgtcgagttcgtcgcct
cactccaacatgtccgactggtcagagggcatttcaagtcccccgacaagcatgcaggct
cagattgcacatctacccgaacagttcaaataa
DBGET
integrated database retrieval system
