Cyclopterus lumpus (lumpfish): 117741900
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Entry
117741900 CDS
T09199
Symbol
rrp8
Name
(RefSeq) ribosomal RNA-processing protein 8
KO
K14850
ribosomal RNA-processing protein 8 [EC:
2.1.1.287
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clum03009
]
117741900 (rrp8)
Enzymes [BR:
clum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.287 25S rRNA (adenine645-N1)-methyltransferase
117741900 (rrp8)
Ribosome biogenesis [BR:
clum03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117741900 (rrp8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_8
Methyltransf_11
Methyltransf_25
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
117741900
NCBI-ProteinID:
XP_034405051
Ensembl:
ENSCLMG00005005757
LinkDB
All DBs
Position
13:complement(8636457..8641665)
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AA seq
570 aa
AA seq
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MFNEDEDWSDEQDVQALSNTVLTSTQKANSSTNVKSKVVGKKSLLRTLQTLGSVPEWKND
DHQQDSDSEADVVPLHSKRKKKRRKKRKKVETTAEQQDSGDLDQTVKVETTGEQQENGDL
DQTVNGQTLASKKRKKDNTSATQKLKNTSVSKTVDNVIIKSKPENTEGLNRQQWKNKMKN
KRKCKNKYSQNEPEREINKAESAEQHEPKEEVNIDSYSNNNSQTPAKKKEKQSKPQKMKK
TQVDTDISGTTDTQTLGEEKQRIGSKVGKDATETSADGTKQKADVPEVENTGEQHQSPLK
RPKPEMSREQILKREKLRKLLHRQEPVQRESPAETEDQPAAPEEEVKPDRSASLRSRMEQ
RLESARFRYINEVLYSTSSGEAKRMFKQDPLAFGIYHRGYTAQVQRWPANPVDAIISYIQ
HKPPSLVVADFGCGDCKVARSVKNKVHSFDLAAACKHVTVCDMANVPLCDGSVDIAVFCL
SLMGTNLADFLAEANRVLKRGGVLKIAEVASRFENVRNFVSALAGLGFKMVNQGTENTHF
YSFELLKTGDAPENIKKFGLQLRPCVYKKR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatgaggatgaagactggagtgacgaacaagacgttcaggcgctgagcaacact
gtgctcacaagcacccagaaggcgaacagcagcacgaatgtcaagtccaaggtggttgga
aagaagagcctgctgcggaccctgcagacactgggatcagtaccagagtggaagaatgac
gaccatcagcaggacagcgacagtgaggcagatgtggtcccattacacagcaagagaaag
aagaaaaggaggaagaagcgaaagaaagtggagacaacagcagagcagcaagacagtgga
gacttagatcagaccgttaaagtggagacaacaggagagcagcaagaaaatggagacttg
gatcagaccgttaatgggcagacacttgcatcaaaaaagaggaagaaagacaacacatct
gcgactcagaagttaaaaaacacatccgtgagcaaaacagtggataacgtaattataaaa
tccaaaccagagaacacggagggactgaacagacaacagtggaaaaacaaaatgaagaac
aagaggaaatgtaaaaataaatacagccagaatgagccagagagggaaatcaataaagca
gaatctgcagagcagcacgagccaaaggaggaagtcaacatagattcatacagcaacaac
aacagtcagaccccagccaagaaaaaggaaaagcaaagtaaaccacagaaaatgaaaaag
acccaagtggacaccgacatatccgggacaacagacacacagacgctcggagaggaaaag
cagcgaattggtagcaaagttggaaaagacgcaactgaaacttctgctgatggaacaaaa
cagaaagcagatgtacctgaagtggagaacacaggtgagcagcaccagtcacccttgaaa
agaccgaaacccgagatgagcagagaacagattctgaaaagagagaagctacggaaattg
ctccaccgacaggaaccagtccaacgggagagtcccgctgagacggaagaccagcctgcg
gccccagaggaggaggtgaaaccggaccgctccgcctccctgaggtcccgcatggagcag
cggcttgagtcggcccgtttccggtacattaatgaagttttgtacagcacgtccagcggc
gaggcgaagcgcatgttcaaacaggacccgctggccttcgggatctaccacaggggatac
acggcgcaggttcagagatggcccgccaacccagtggacgccatcatctcttacatccaa
cacaaacctccctctctggtggttgcagactttggttgtggtgactgtaaagtagcgcgc
agcgtgaagaacaaagtgcacagcttcgacttggcggctgcctgcaaacatgtcacagtc
tgtgacatggccaacgtcccgctttgcgacggctctgtggacatcgccgtgttctgcctt
tctctcatgggaaccaacttggcagattttctagccgaggccaaccgtgtgttaaagagg
gggggtgtcctgaagatagcggaagtggcgagcaggttcgagaacgtgcggaactttgtc
agtgcgctggcaggactgggatttaagatggtgaaccagggcacagagaacactcatttc
tactcctttgaattgctgaagacgggagatgctccagaaaatatcaagaaatttggactt
cagttgaggccctgcgtctacaagaaaagatga
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