KEGG T09199: 117741938

Cyclopterus lumpus (lumpfish): 117741938

Entry

117741938         CDS       T09199

Symbol

polr2i

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB9

K03017

DNA-directed RNA polymerase II subunit RPB9

Organism

clum Cyclopterus lumpus (lumpfish)

Pathway

clum03020

RNA polymerase

clum03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:clum00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    117741938 (polr2i)
  09124 Replication and repair
   03420 Nucleotide excision repair
    117741938 (polr2i)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clum03021]
    117741938 (polr2i)
   03400 DNA repair and recombination proteins [BR:clum03400]
    117741938 (polr2i)
Transcription machinery [BR:clum03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     117741938 (polr2i)
DNA repair and recombination proteins [BR:clum03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      117741938 (polr2i)

SSDB

Motif

Pfam:

RNA_POL_M_15KD TFIIS_C Ogr_Delta Zn_ribbon_recom TF_Zn_Ribbon DZR Zn_Tnp_IS1595 Lar_restr_allev zf-C4_Topoisom GpA_ATPase

Other DBs

NCBI-GeneID:

117741938

NCBI-ProteinID:

XP_034405106

Ensembl:

ENSCLMG00005012665

LinkDB

Position

13:complement(15167999..15170425)

AA seq 126 aa
MDLETGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKIT
HEVDELTQIIADVSQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHC
GHRWTE

NT seq 381 nt +upstreamnt +downstreamnt
atggatttagaaactggaacatacgaaccgggatttgtggggatacggttttgtcaagaa
tgtaacaacatgttgtacccgaaagaagacaaagagaaccgtatcctgctctatgcgtgc
aggaactgtgactaccaacaagaagcggacaacagctgcatctatgtcaacaagatcacc
cacgaggttgatgagttgacacaaatcattgctgatgtatctcaggatccaacacttcca
aggacagaggaccacccctgtcccaaatgtggtcacaaggaggcagtgttcttccagtct
cacagtatgaaggctgaggacgctatgagactgtactacgtgtgcacagcccctcactgt
ggacacagatggacggagtaa

DBGET integrated database retrieval system