Cyclopterus lumpus (lumpfish): 117742450
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Entry
117742450 CDS
T09199
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase isoform X1
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00780
Biotin metabolism
clum01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
117742450 (hlcs)
Enzymes [BR:
clum01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
117742450 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
117742450 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
117742450 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
117742450 (hlcs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
117742450
NCBI-ProteinID:
XP_034405713
Ensembl:
ENSCLMG00005014196
LinkDB
All DBs
Position
14:complement(23806093..23839515)
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AA seq
911 aa
AA seq
DB search
MLITLCYVYLWVRFHKCYSVLIRNSLSRLSSGSFSFSFAVCSSSASAPATAPPTRRRQPG
PLPAEGDAVFLQLGDKAVYVTEPQACDDLSRWTVLLGSSLVCGPRIENISFIIEAAGHSM
GYHSPHTSNKKVLKWSDYCLPLARSPGQPFRAVAQASVDNFSRLGVAFIEDRLQLDDGLT
PSKIIPVLLQESTLSLLLEKQCPDAQTPPCLCGAEPLLRHLPCRKGSLLLPPEVNRRLEE
RRGSEPLHGTKDPHPVCDSEDRSLGNHHHMEGHRHHLHLSNCHECLELENSTILSVKYAS
ADNIPDLPDDDSAGLDSGDETLDDVEHHAEGFSGQSGGPYCNSKPPNVLLYTGGCQERFQ
LVRQILSECINMEDNIIYPLQPQLALSDPWLDNTKLLVLAEEEPLTPLLQTRFLTYLSQG
GRVLGLASTLCPAGLCLEAREERRGQVGRLSFTREDSTELELSVLSSGKVYVRDTQGGGE
VELWGELKGDAPHQRDMVVVRVTHGEDGGEAVLCQAHLEMAPDPQNLTAKGFDELKVSNA
LRYEVLTEILTSLGLSCELNETPAPSPVHLLATSQEAKTISVDWLRTHADENGLLALSKA
SLSLVSSSELQDGPSLPAGSLALVTDSSESHSWPQFSMETYRENLKTSLLGHTVLYAEVA
TSTMDLLQGLTMHLPKNVGLMAVAARQSQGRGRGGNAWLSPLGCAMFTLAVQVELSSKLG
QRIPFLQHLAALAVVEAVRTLPGYQDIDLRVKWPNDIYYSDLMKLGGVLVTSTVTGSTFH
LLIGCGFNVTNSNPTVSINDLIQQHNAGHNCSLQPLRCDQLIARTAGCLEALIGSFQRGG
ADAVLPTYYKRWLHSGTRVRLWSEDGPEAEVVGLDPNGFLQVHNKEQGVVSLEPDGNSFD
MLKKLVVIKQH
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgttgataacgctgtgctacgtctatctgtgggtccgctttcacaagtgctactcggtt
ttgatccgaaacagcctgtcccgactgagcagcggcagcttcagcttcagcttcgcagtt
tgctccagctcggcctcggcaccagccacggcgccgccgaccaggcgccggcaacccggt
ccgcttcctgccgagggggacgccgtcttcctccagctgggagacaaggccgtctatgtc
acggagccgcaggcgtgcgacgacctcagcaggtggaccgtgctgttggggtcctctctg
gtttgcggtccgcgcatagagaacatttcattcatcatagaggctgctggacactcaatg
ggctaccactctcctcacacgtccaataagaaagtgctgaagtggtctgattactgcctc
cctctggcccggagccccggtcagcccttcagggcggtggcacaggccagcgtggacaac
ttcagtcggctgggggtggcttttattgaggatcgccttcagctggacgatggactgacg
ccgtcaaagataatccccgtcctcctccaagaatccaccctcagcctgctgctggagaag
cagtgtccagacgcccagacgccaccatgtctctgcggcgctgagcctttgctccgtcac
cttccgtgccgcaaaggcagcctcctcctcccgccggaggtcaataggaggttggaggag
cggagagggtcggagccgctccacggcaccaaggacccgcatccagtttgcgactcggag
gaccgctccttgggcaaccatcaccatatggagggccacagacaccacctccacctgtcc
aactgccacgagtgcttggagctggagaacagcaccatcctctcagtcaagtacgcgtcg
gccgacaacattcccgaccttccagatgatgactcggcagggctggacagtggggatgag
actctggatgacgtcgagcaccacgccgaagggttttccgggcagagcggtggaccttac
tgtaatagcaagccgccaaacgttctgctgtacacgggcggctgccaggagcgttttcag
ttagtccggcagattttatcagagtgtataaacatggaggacaacataatatatcccctc
caaccgcagctggctctgagcgacccatggctggacaacaccaagctcctcgtcctggca
gaggaggaacccctgacccccctgcttcagacccgttttctcacctacctgagccagggg
ggcagggttcttgggctggcctccaccctttgcccagcaggcctctgcctggaggcccgg
gaggagcgccgcggccaggtcggcaggctgagcttcaccagggaggacagcacggagctg
gagctgagcgtgctgtcgagtgggaaggtctacgtcagggacacgcagggaggaggggaa
gtggagctctggggggagctgaagggggacgccccccaccagagggacatggttgtagtc
agggtgacccacggagaggacggcggtgaggctgtcctctgccaggcccacctggaaatg
gctcccgacccccagaatttgacggccaaaggtttcgatgaactgaaagtcagcaacgcg
ctgcgttatgaagtcttgacggagatcctcacctctctgggcctcagctgcgagctgaac
gagaccccggccccgagcccagtccacctgctggccacctctcaggaggccaagaccatc
tccgtggattggctgcggacgcatgctgatgaaaatggcctcctcgcgctgtccaaggcc
tcgctctcgctggtgtcgagttctgagctccaggacggcccctcgctccccgctggctcc
ttggccctggtcacagactcctcggagtcccacagctggccgcagttcagcatggagacc
tacagagagaacctgaagaccagcctgctggggcacaccgtgctgtatgccgaggtcgcc
acgtccaccatggacttgctgcaagggctgactatgcacttaccaaagaacgtgggcctg
atggcggtcgctgctcgacaaagccagggcagagggcggggcgggaatgcctggctcagc
cctctgggatgcgccatgttcactctggctgtccaggtggagctgagctccaagctcgga
cagaggatccccttcctgcagcatctggccgccctggcggtggtggaggccgtccgcact
cttcctggataccaggacatagacttgagggtgaagtggcccaatgacatctattacagt
gacctaatgaagctcgggggagtgctggtgacttccactgtgaccggatccacctttcac
ctgctcataggctgtgggttcaacgtgaccaacagcaacccgacggtgtccatcaatgac
ctaatccagcagcacaacgcggggcacaactgcagcctgcagccgctccgctgcgaccag
ctcatcgcccgcacggccggctgcctggaggccctcatcggcagcttccagcggggtggg
gccgacgccgtcctgcccacctactacaagaggtggctccacagcgggacacgggtgcgt
ctctggagcgaggacggaccggaggccgaggtggtgggcctggaccccaacggcttcctc
caggtgcacaacaaggagcagggcgtggtctccctggagcccgacgggaactccttcgac
atgctgaagaaactggtggtcatcaagcagcactag
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