Cyclopterus lumpus (lumpfish): 117746329
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Entry
117746329 CDS
T09199
Symbol
pax3a
Name
(RefSeq) paired box protein Pax-3a isoform X1
KO
K09381
paired box protein 3/7
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117746329 (pax3a)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117746329 (pax3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
Homeobox_KN
HTH_23
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
117746329
NCBI-ProteinID:
XP_034411279
Ensembl:
ENSCLMG00005004640
LinkDB
All DBs
Position
17:complement(9110015..9128506)
Genome browser
AA seq
487 aa
AA seq
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MTALGGGLPRMMRPTPHQNYPRAGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGVRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQTSSPEVDKKIEE
YKRENPGMFSWEIRDKLLKDGVCDRNNVPSVSAISRIMRSKFGGAGDDEEEDDDVVKREM
EENEPRTKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAM
SGLQSYQLSDSPYTPTSIAQASEQPSTVHRPQPLPPTSVHQSGLGSGAGSQDGSSAYCLS
AGRHSFSGYSDSFVTPTGHTNTVNPTIANSLSPQVMGLLNPGGVPHQAQSDFALSPLTGG
LEPNGGMAASCHGSQRLEALPGLTSMPTLPSTQSYCPPSYTTQAYAMDHHPSYQYGQYSQ
SKVPFII
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgcttggtggaggtttacccagaatgatgagaccgactcctcaccagaactac
ccgcgggcaggatactctctggaagtctccactccgttaggacagggtcgggtcaaccag
ctcggtggcgtcttcataaacggcagacctctccccaaccacatccgacataaaattgtg
gagatggcgcatcacggcgtccggccgtgtgttatctcccgtcagctgcgcgtgtcccac
ggctgcgtctccaaaatcctgtgccggtaccaggagacaggctccatcaggccgggggcc
atcggaggcagcaagccaaagcaaacctcttctccagaggtggacaagaaaatcgaagag
tacaagagagaaaacccgggcatgttcagctgggaaatcagggataaattactgaaagat
ggagtctgcgacaggaacaacgttccctcagtgagcgccatcagtcgcatcatgcggtct
aaattcggcggagccggtgacgatgaagaggaggatgatgatgtggtgaagagggagatg
gaggaaaacgaaccgcggacaaaacacagtatcgatggcatcctgggagaccgatccagt
cactcagacgagggctccgacgtggactcggagcccggcctgcctctgaagaggaagcag
cgccgcagtcgcaccaccttcacagcggagcagctggaggagctggagagggccttcgaa
cgcacgcactaccccgacatctacacgcgggaggagctggctcagcgggccaaactgacg
gaggctcgagttcaggtgtggttcagcaacagaagagcccggtggaggaagcaggcagga
gccaatcagctgatggcgtttaaccacctcatccccgggggtttccctccctcagctatg
tctggcctgcagtcctatcagctgtcagacagcccctacactcccacttctatagctcaa
gcatccgagcagcccagtacggtccaccgaccgcagcctctgccccccacctccgtgcac
cagagtgggctcggctcgggtgccggttcccaggatggaagctctgcgtactgcctgtcg
gctggacgtcacagcttctcaggatattcggacagctttgtgaccccgacaggacacacc
aacactgtcaaccccaccatcgccaacagcctctcaccacaggtaatgggcctgttgaac
ccaggaggagtgccacatcaggctcagagtgactttgccctctccccactgaccggaggc
ctggagcctaacggaggcatggctgccagttgtcatggttcccagcgtttggaggctcta
ccgggcctgaccagtatgcccaccctgcctagcacccagtcttactgcccaccttcctac
accacccaagcctacgccatggaccaccatccgtcctatcagtatggacagtacagtcag
agcaaggtacctttcattatatga
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