Cyclopterus lumpus (lumpfish): 117748849
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Entry
117748849 CDS
T09199
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03020
RNA polymerase
clum04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117748849 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
117748849 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117748849 (polr3a)
Enzymes [BR:
clum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117748849 (polr3a)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
117748849 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
117748849
NCBI-ProteinID:
XP_034414841
Ensembl:
ENSCLMG00005013000
LinkDB
All DBs
Position
19:12420984..12438022
Genome browser
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTKHTPLPYGVLDHRM
GTSEKDRPCLTCGKNLADCLGHYGYLDLELPCFHVGYFKAIIGILQMICKTCSSIMLTKD
EKLQFMDFLKKPNLPYLQKRGMKKKISDKCRKRTICLSCSAFNGPVKKCGLLKIIHEKYK
TTKKVVDAFVSEFLQSFDTAIEHNKVVEPLLTRAQENLNPLVVLNMFKRISQEDIPLLLM
NPEAGKPADLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANLELLRKLVRNGPEVHPGANF
IQNRHTQMKRFLKYGNREKIAQELRFGDVVERHLMDGDIVLFNRQPSLHKLSIMAHIAKV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFERSKSCQIIASILVGQDEKVKVSLPRPAIMKPMALWTGKQI
FSLILKPSKECPVKANLRTKGKQYCGKGEDLCFNDSFVVIHNSELMCGSLDKGTLGSGSK
NNIFYILLRDWGQLEAANAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKQDLLDDG
YTKCDEYIEALRTGKLPQQPGCTAEETLEALILRELSVIRDRAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDVIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAIYVCSDEPALSQNELVLTADAITKRVDFLC
CKDGFLEEMKKFIKSISERIKKTRDKYGIHDNGTSEPKVLYQLDRITPTQLEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKNI
STPIITAHMDVDDNADFGRLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENNKSSMYYVLQALKGDLPKVV
VQGIPEVSRAVIHIDEQSTKTMYKLLVEGDNLRAVMATHGVNGSRTTSNNTYEVEKTLGI
EAARATIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADKDPSPARRPLLFD
SADFHIPLIT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagtttagagagacagatgtggccaagaaaataagccacatctgcttt
gggatgaaatctgctgaacagatgcgtcagcaggcccacatccaggtggtcagcaagaat
ctgtacagccaagacaccaaacacaccccattgccctatggagtgttggaccaccgcatg
ggcaccagtgagaaagacagaccgtgtttgacatgtgggaagaatctggcagattgcttg
ggacattatggctacttggatctggagctgccatgttttcatgttggctattttaaagcc
atcatcggaatcttacagatgatttgtaagacatgctcgagcataatgctgacgaaagac
gagaaactgcagttcatggatttcttgaaaaagcccaacctgccctatctccagaaacga
gggatgaagaagaagatctctgataagtgtcgcaaaaggacaatctgtctcagttgttca
gctttcaacggaccagtgaaaaagtgtggtctgcttaagatcatccatgagaagtataaa
acgaccaagaaggtggtggatgcttttgtctctgagtttctgcagtcctttgatactgcg
attgagcacaacaaagtggtggaacctttgctgaccagagcacaggaaaacctgaaccct
ctggtggtgctgaacatgtttaagaggatttcccaagaagacattcccctgctgctgatg
aaccctgaggcagggaaacccgcagacctcattctcacccgcctcctggtgcctccactc
tgcatacgaccctctgtggtcagcgacctgaagtcgggcaccaacgaggatgacctcacc
atgaagctcacagaaataatcttcctcaacgatgtcatcaaaaagcatcgtatgacgggg
gcaaagacccagatgatcatggaggactgggacttcctccagctgcagtgtgctctttac
atcaacagcgagctttccggcatccccctcaacatggcacctaagaaatggaccagaggc
tttgtgcagagacttaaagggaaacaaggtcgattcagaggaaacctctcaggaaaaaga
gtggacttctctggcagaactgtaatttcccccgacccaaacctgaggatcgacgaggtg
gccgtccccgtgcatgtggccaaaatcctaacgtacccagaaaaggtgaacaaagccaat
ttagagctattgaggaaactggtccgcaatggtcctgaggttcaccccggagccaacttt
atccagaatcgtcacacacagatgaaaaggtttttgaaatacggaaaccgtgagaagatc
gctcaagagctgaggtttggggatgtggtcgaaaggcacctgatggacggagacatcgtc
ctcttcaatcgacaaccctccctgcacaaactcagcatcatggcccacattgccaaagtc
aaacctcacaggacgtttcggttcaacgagtgcgtgtgcaccccatacaatgccgacttt
gatggtgacgaaatgaaccttcatctccctcagactgaagaagccaaagctgaggccctc
gtcctgatggggacaaaagcaaatcttgtcactccaagaaatggcgaacctcttattgct
gccattcaagactttctgacaggggcttacctcttgacgctgaaggacaccttctttgaa
agatcaaaatcctgtcagataatcgcttcaatccttgtgggccaagatgaaaaagtcaag
gtctctctcccccgtccggctatcatgaagcccatggctctgtggacgggcaaacagatc
ttcagcctcattctgaagccaagcaaggaatgtccagtcaaggccaacctgcggaccaag
ggcaaacagtactgtggcaagggagaggatctctgcttcaacgactcattcgtggtgatc
cacaacagtgagctgatgtgtggttctctggacaagggcaccttggggtcaggttcgaag
aacaacatcttctacatcctgctgagggactggggacagctggaggctgccaacgccatg
tctcgcctggccagactcgctccggtgtatctatccaaccgaggcttttctattggcatc
ggtgacgtgacacctggccagggtctgctgaaggccaagcaggacctgctggatgacggt
tacacaaagtgtgacgaatacatcgaagctctacgcacgggcaagttaccacagcaacca
ggatgcacagcagaggagactctggaggctctcatcttgagagagctgtccgtcatcaga
gatcgagctggtagtgcctgcctcagggagctggacaagagcaacagccctctcattatg
gctctctgcggctccaaagggtctttcattaacatctcccagatgattgcctgtgtgggc
cagcaggccataagtgggtctcgagtccctgatggatttgagaatcgctccctgcctcac
tttgaaaagcattcaaaactccctgcggctaaaggctttgtggccgacagcttctactct
ggcctgacgcccaccgagttctttttccacaccatggctggccgtgaaggtttggtggat
actgctgtaaaaactgcagagactggatatatgcagaggcgtctggtgaagtccctggag
gatctgtgctcgcagtacgacctgacagtacgcagctccaccggcgacgtcatccagttt
atttatggcggcgatggtctggatccagcggccatggagggaaaggacgagccgctggag
tttaagagagtcctagacaacatccgggcgatctacgtgtgttcagacgagccggcgctc
agtcaaaacgagctggtcctcactgccgacgccatcacgaagagagtcgacttcttgtgc
tgcaaagacggcttcttggaggagatgaagaaatttattaagagtatctctgaaaggatc
aagaagaccagagacaagtacggcatccacgacaatggcaccagcgagccaaaggttctc
tatcagctggaccgcatcacacccacccaactggagaagttccttgaaacctgcagagac
aagtacatgagagctcagatggagcccggctcggcagtcggggccctgtgtgcccagagc
atcggagagccagggactcagatgaccctgaaaaccttccacttcgctggtgtggcatcc
atgaacatcactctgggggtgcctcgcatcaaagagatcatcaatgcctccaagaacatc
agcacccctataattacggctcatatggatgtggacgacaacgctgacttcggccggctg
gtgaagggaaggatagagaaaactcttctcggagagatttccgagtacatcgaggaggtt
tttctaccagacgactgcttcatcctggtgaaattgtcactggagagaataaggctgctg
cgactggaggtaaatgcggaaacggtgcgttactctatctgcatgtccaaactgcgagtg
aagccaggggacatcgctgtgcacggcgaggcggtggtgtgtgtgtctccacgagagaac
aacaaaagctccatgtactacgtgctgcaggcattaaagggggatcttcctaaggttgtg
gtacaaggtataccggaagtttcccgagctgtcattcacattgacgaacagagcaccaag
accatgtataagctcctggtggagggggacaacctgagagccgtcatggcaactcacgga
gtgaacggaagcaggaccacttcaaacaacacatatgaggttgagaagactttgggtatt
gaggcggctcgagccaccatcatcaatgagattcagtacaccatggtgaaccatggaatg
agcattgaccggcgtcacgtcatgcttctagcagatctcatgtcctacaagggggagatc
cttggaatcaccaggttcggtttagccaaaatgaaggagagtgtcctcatgctggcctcc
ttcgagaaaacagctgatcatctcttcgatgccgcctactttggacaaaaggactccgtc
tgtggtgtgtctgagtgcatcattatggggattccaatgaacatcggaacgggactgttt
aaactactacacaaggctgacaaggatccctctccagcaagaagacctctcctcttcgac
agtgcagacttccatatacctctgattacatag
DBGET
integrated database retrieval system
