Cyclopterus lumpus (lumpfish): 117749658
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Entry
117749658 CDS
T09199
Symbol
chrnd
Name
(RefSeq) acetylcholine receptor subunit delta
KO
K04816
nicotinic acetylcholine receptor delta
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117749658 (chrnd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117749658 (chrnd)
Ion channels [BR:
clum04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117749658 (chrnd)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117749658
NCBI-ProteinID:
XP_034416230
Ensembl:
ENSCLMG00005022755
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All DBs
Position
20:4189446..4197892
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AA seq
521 aa
AA seq
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MKLRPAALSAAFLLLLLSPGCWSRNEEERLINYLIKERGYIKELRPVEQQQDAVDVYLAL
TLSNLISLKEVDETLLTNVWIDHTWTDYRLSWNVTEFDGIDMLRLPTNMVWLPEIVLENN
NDAQFQVAYYSNVLVDNTGLCYWLPPAIFRSSCSINVNYFPFDWQNCTLKFTSLTYNARE
IQMLLKQDGDGVNTWTVEWIIIDPASFTENGEWEINHRPAKRNTYKHIPMESNKHQDITF
YLVIKRKPLFYIVNIIIPCVLISFLASLVYYLPADSGEKMTLSISVLLAQSVFLLLISQR
LPETSMSVPLIVKYLMFIMVLVTVVVLNCVVVLNLHFRTPSTHVMSDWTMKFFLERLPRI
LRMSRPSEEEPRWDGALPRRSSSVGYIASAEEYYSVKSRSELMFEKQSERHGLAARATHA
AIVKPKDEGGVTDQLYAEMKPAVDGANYIIKHMRNKNAYNEEKDNWSGIARTVDRLCLFV
VTPVMTVGTIIIFLMGICNHPPHLPFQGDSHDYREENPRLL
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaagctccggcctgcagctctgagcgccgccttcctgctcttgctgctctcacccggc
tgctggagcaggaacgaggaggagcggctcatcaactacctgattaaggagcgaggctac
atcaaggagcttcgtcccgtggagcagcagcaggacgccgtggacgtctacctcgcgctc
acactgtccaacctcatctctctgaaagaagtggacgagactctgctcacaaatgtctgg
atcgatcacacgtggacggactaccgtctgtcatggaacgtgacggagttcgatggcatc
gacatgctccgcctgcccaccaacatggtgtggctgccggagatcgtgctggaaaacaat
aacgacgcccagttccaggtggcctactacagcaacgtactggtagataatactggtctc
tgctactggttacctcccgccatcttccgctcctcctgctccatcaacgtcaactacttc
cccttcgactggcagaactgcacgctcaaattcacctctctaacctacaacgccagagag
atccagatgctgctgaagcaggacggggacggagtcaacacatggacggtggagtggatc
atcatcgacccggcgagcttcaccgagaacggcgagtgggagatcaaccaccggccggcc
aagagaaacacctacaagcacatccccatggagagcaacaagcaccaggacatcaccttc
tacctggtcatcaagcgcaagccgctcttctacatcgtcaacatcatcatcccctgcgtg
ctcatctccttcctggcctcgctcgtctactacctccccgccgacagtggggagaagatg
accttgtccatctcggtgctgctggctcagtccgtcttcctgctgctgatctctcaaagg
ctgccggagacttccatgtctgttccacttattgtcaaatatctgatgttcatcatggtg
ttggtgacggtggtggtgttgaactgtgtggtcgtcctcaacctgcacttcaggacaccg
agcacacacgtcatgtctgactggaccatgaagttcttcctcgagcggctgccccgcatc
ctgcgcatgtcccgcccctcggaggaggagcctcgctgggacggagcgttgccgcggcgc
tccagctcggtgggctacatcgcctcggcggaggaatactacagcgtgaagagtcgcagc
gagctgatgttcgagaagcagtcggagcgccacggcctggcggcgcgggccacgcacgct
gccatcgtgaagccgaaggatgaaggcggagtcacagatcagctgtatgcggagatgaag
ccggctgtggacggagcgaattacatcatcaagcacatgcgcaacaagaacgcctacaac
gaggaaaaagacaactggagcggcatcgcccgcacggtggaccgcctctgcctcttcgtg
gtgaccccggtgatgaccgtgggcaccatcatcatcttcctgatggggatctgtaaccat
cctccacacctgcccttccaaggagactcgcacgactacagagaggagaacccccggctg
ctgtga
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