Cyclopterus lumpus (lumpfish): 117751478
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Entry
117751478 CDS
T09199
Symbol
dnmt3ab
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 3A isoform X1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum00270
Cysteine and methionine metabolism
clum01100
Metabolic pathways
clum04148
Efferocytosis
Module
clum_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
117751478 (dnmt3ab)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
117751478 (dnmt3ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117751478 (dnmt3ab)
03032 DNA replication proteins [BR:
clum03032
]
117751478 (dnmt3ab)
03036 Chromosome and associated proteins [BR:
clum03036
]
117751478 (dnmt3ab)
Enzymes [BR:
clum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
117751478 (dnmt3ab)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117751478 (dnmt3ab)
DNA replication proteins [BR:
clum03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
117751478 (dnmt3ab)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
117751478 (dnmt3ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADD_DNMT3
ADDz_Dnmt3b
DNA_methylase
PWWP
Motif
Other DBs
NCBI-GeneID:
117751478
NCBI-ProteinID:
XP_034419257
Ensembl:
ENSCLMG00005015971
LinkDB
All DBs
Position
22:19777942..19810675
Genome browser
AA seq
994 aa
AA seq
DB search
MPSNTVTNTNNNTNNNIPAFKGSDYADSPGNRVGESTTLEMDPMKEEKSAKSAASCKAGA
PGRKRKQFPAESCGSLKGVAVGNSHAGAGRPTAAQVHNGDAGAHRGRTSDARFPKQEEKR
DAENGIPGDPPPRRVEDGSRGRSPSPSPEENGFQLGREDQQDSERDKDDGSATPCKKRGR
RKLERPTKYVEHKEEDRRDAVKTELKQGGRGRRGDGWEIGLRQRPMPRITFQAGDPHFIS
KRTREEWLAKWKMEAEQKSKLMSAMNAIKDPEENEAETQVEDVSVIKHPSPVKQQPQVHT
QSQPQYQQQSQSSLPQQQQQQQQQHQQQSPQQPTDPASPTVATTPEPVAIGGGDKTSPKP
ADTEPEYEDGRGFGIGELVWGKLRGFSWWPGRVVSWWMTGRSRAAEGTRWVMWFGDGKFS
VVCVEKLMPLSSFDNAFHQPTYNKQPMYKKAIYEVLQAASSRAGKAFISCPDSDETESSK
SVEMLNKQMIDWAMTGFQPTGPKALEPPEEERNPYKEVYPEMWAEPEAAAYTPPPAKKPR
KSTAEKPKVKEIIDERTRERLVQEVRQKCRSLEDICISCGSLNVSLEHPLFAGGMCQGCK
NCFLECGYQYDDDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDLLVGQGAAHAAINE
DPWNCFMCGQKDVFGLLVRRADWPNRLQHFFANNHDQDFDAPKLYPPVSVEKRKAIRVLS
LFDGIATGLLVLKELGIRVDRYIASEVCEDSITVGIVRHQGRIMYVGDVRNVTRKHIQEW
GPFDLVIGGSPCNDLSIVNPARKGLFEGTGRLFFEFYRLLHEARPKEGENRPFFWLFENV
VAMGVSDKRDISRFLECNPVMIDAKEVSAAHRARYFWGNLPGMNRPLSAMYNDRVDLQDC
LEHGRTAKFGKVRTITTRSNSIKQGKDQHFPVYMNEKEDILWCTEMERIFGFPVHYTDVS
NMSRLARQRLLGRSWSVPVIRHLFAPLKDYFACT
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccaacaccgtcaccaacaccaacaacaacaccaacaacaacatcccggcattc
aaaggatccgactatgccgattcacctggaaacagagtgggtgaaagcaccacactggaa
atggacccgatgaaggaggagaagtcggctaaaagcgccgcctcttgtaaagccggcgcg
cctggaaggaagcgcaagcagtttccagccgagagctgtggctctctcaaaggcgtcgcc
gtgggcaacagccacgccggagcggggaggccgaccgcggcgcaggtccacaacggagac
gccggcgctcacagaggcaggacgtccgacgcccgcttccccaaacaggaggagaagagg
gacgcggagaacgggatccccggggacccgcccccccgccgggtggaggacggctcccgg
ggtcggagcccgagtccgtccccggaggagaacgggttccagctcggccgggaagaccag
caggactcggagagggacaaggacgacggctcggcgacgccgtgcaagaagcgggggagg
cggaaactggagcgcccgacgaaatatgtggagcacaaggaggaggacaggcgcgatgca
gtcaagaccgagcttaaacagggaggtcgaggcaggaggggagatggttgggagatcggc
ctacgtcagaggcccatgcccagaataaccttccaggctggtgaccctcatttcattagc
aagaggaccagagaggaatggctggccaagtggaagatggaggcagaacaaaagtccaaa
ctgatgtcagcgatgaacgcgataaaggatcccgaggagaacgaagcggagactcaggta
gaagacgtctcggtaatcaagcacccgtcacctgtaaagcagcagcctcaggtgcacact
cagtcacagcctcagtatcaacagcaatcgcagtcgtcgctgccacaacaacaacaacaa
caacaacaacaacatcagcagcagtcgcctcagcagccgactgaccccgcctcccccacc
gtggccacgacccctgagcccgtcgccatcggaggtggagacaagacgtcccccaagcct
gcggacacggagcccgagtacgaggacggtcgtggttttggcatcggcgagctggtctgg
ggaaagcttcgagggttctcgtggtggccgggccgcgtcgtgtcctggtggatgacgggg
cggagcagagctgccgaggggaccagatgggtgatgtggtttggagacggaaaattctca
gtggtttgcgtagagaaactcatgcctttaagctccttcgataatgcctttcaccaaccg
acttacaacaagcagcccatgtacaagaaagccatctacgaggtgctgcaggcggccagc
agccgggcagggaaagccttcatatcctgccccgacagcgacgagacagaaagctctaaa
tctgtagagatgctgaacaagcagatgatcgactgggccatgacgggatttcaacccact
ggaccgaaggccttagagcccccagaagaggagcgtaacccatacaaagaggtgtaccct
gagatgtgggcggagcctgaagcggcggcatatacccctcctccagccaagaagcctcgc
aaaagcacagcggagaagcccaaggtcaaggaaatcatcgacgagaggacacgagaacgg
ctcgttcaagaagtgagacaaaagtgccgcagcctagaggacatctgcatctcctgcgga
agtctgaacgtgagcctggagcacccgctgttcgcaggaggaatgtgccagggctgtaag
aactgcttcctcgaatgcggttatcaatatgacgacgacggataccagtcgtactgcacg
atctgctgcggagggcgagaggtgctcatgtgcggaaacaacaactgctgtcggtgtttc
tgcgtggagtgcgtcgacctcctggtgggtcagggcgccgcccacgcagccatcaacgag
gacccgtggaactgcttcatgtgcggtcagaaggacgtgttcggcctcctggtgcgccgc
gccgactggcccaaccgactgcagcacttctttgcaaataaccatgaccaggattttgat
gcaccaaagctttaccccccggtctcggtggagaagaggaaggccattcgtgtcctgtcg
ctatttgacggcatagcaaccgggctgttggtgctgaaagaactgggcatccgagtggat
cgctatatagcttccgaagtgtgcgaggactccatcacggtgggcatcgtgcggcatcag
ggtcgcatcatgtatgtcggcgacgtgaggaacgtcacgcgcaagcacatacaggagtgg
ggtccctttgacctagttattggaggaagcccatgcaatgacctctctatagtcaacccc
gctaggaaaggtcttttcgagggcaccggacgcctgttctttgagttttacaggctgctg
cacgaggcccggcccaaggagggggagaaccggccgttcttctggctctttgaaaacgtg
gtcgccatgggcgtcagcgacaagagggacatatctcgctttttagagtgcaacccggtg
atgatcgatgccaaggaggtgtccgccgcccaccgcgcccgctacttctgggggaacctc
cccggcatgaacaggcctttgagtgcgatgtacaatgacagggtggacctccaggactgt
ctagaacacggcagaacagcgaagttcggcaaggtgaggaccatcaccaccaggtccaat
tccatcaagcagggcaaggaccagcacttccccgtgtacatgaacgagaaggaagacatc
ctgtggtgcaccgagatggagaggatcttcggcttcccggtccactacacggacgtgtcc
aacatgagccgactggcgaggcagcgtctcctgggccggtcgtggagcgtcccggtgatc
cgccacctgttcgcgccgctcaaagattacttcgcctgcacttga
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