Cyclopterus lumpus (lumpfish): 117751615
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Entry
117751615 CDS
T09199
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B-like
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04020
Calcium signaling pathway
clum04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117751615
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117751615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117751615
Ion channels [BR:
clum04040
]
Ligand-gated channels
Glutamate (ionotropic)
117751615
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
117751615
NCBI-ProteinID:
XP_034419437
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Position
22:19006651..19038212
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AA seq
1210 aa
AA seq
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MKGKLSPASRVFNRRVATQREEVTEEGEDGGGEGREAAGGRSWLRIKEKLQKKKNRFHLQ
MSARVPPSTLGSLLLAVLQGGEGDRDRVGRGESRWGGAAVICPGWEEGGEGLLSHLQTHS
GSNWHLWDIINLTLVSGGGDRRGESREEKKEEQREEEALKILSARFLRSPSPISSVLLLG
SDPECLSAVLRAAQRLAPSLPSLQWIMGYPLSPDSLHTLGGPLGLLAYGEVGRKPISFYI
RDALQLIGRAVTAATMVRPDLALIQNMVNCYDKPNGHELPSSGQYLARFLSNTSFTGATG
LIQVDAGLSRVLSSQLFHVWSLKRGALGQPAWVTVGQWTRGRLELEGGILGLVGGFRSSQ
GQGLGAGVRGGDGQGDSNVGGRWRPGESVEGHRLRVVTLVEHPFVFTREVDEDGLCPAGQ
LCLDPRTNRSDLIQSLFNQLHNPNTTLADWEGNELPEDLRKCCYGYCVDLLEKLAEDMGF
TFDLYIVGDGKYGAMSGTGRWTGLVGDLLSGTADMAVSSFSINSARSRVIDFTSPFYSTS
LGILVRSQDTAAPIGAFMWPLHWSMWVGIFVTLHLTALFLTLYEWNSPFGMTPHGRNRLR
VFSYSSALNLCYAILFGRTVATKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEK
TFEQVSGIHDDKLHHPSLGFRFGTVRESSAEDYMKKSFPEMHDYMRRFNQPTTPEGVHML
KTDPPALDAFIMDKALLDFEVSIDAECKLLTVGKPFAIEGYGIGLPQASPLTRNVSEFVS
RYKSDGFMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCMGVGGALLTLAGE
HTFYHLVIPRLRRTHTLQYWLHTSQKIHRALHATYEDDGKELTDLDQNPSSCISENCTLH
RKQHQPPPPSPPTSLPASTTAGDTCNSSPSHEPKEKRVHFDLETLHSYRLRTHTASVRGR
PGMVGRPGLGLGGWGLGNMGGFTSPPRISLQANGGPVSSLASAGLVLSPLGSRAAQTSLW
EGELQDLQGKIETFRTQLREALARRAEIQSSLERERCGLVRRDTSLERDRQRTHTINTDR
SSSTQPKLPERDRTGQLQTLNNQQAGRDNQSGGPWTLEHHGRSSQLNTVNSLDRGRGNQL
RSVSTLTGERTVQSRTSASLERSRVNQPGAGNAPVQSRNTSSLDRQMANLSRTLNTLERT
ANQSGVGSET
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtaaactttcgcccgcgtcccgcgtcttcaatagaagggtcgcgacacagagg
gaggaagtgacggaagagggggaagacggaggtggagagggccgagaggcggcgggtgga
aggagttggctccgcatcaaagagaagctgcaaaagaagaagaaccggttccacctgcag
atgtcggcccgcgtgcctccgtcgaccctgggcagcctgctgctggcggtcctgcagggc
ggagagggggaccgggacagggtgggccgtggggaaagcaggtgggggggagcagctgtc
atctgccccgggtgggaggaagggggcgaggggttgctgtctcacctgcagacgcacagc
ggttcgaactggcatttgtgggacatcatcaacctgaccctggtctccgggggcggggac
cggagaggggagagcagggaggagaagaaggaagaacagagggaagaggaggctttgaag
atcctctccgcccgtttcctgcgctccccgtcccccatctcctccgtcctcctcctgggg
tccgaccccgagtgcctctccgccgtcttgcgggcggcccagcggctggcgccgtcgctg
ccgtcgctgcagtggatcatgggataccccttgtctccggattccctgcacactctcggg
ggtccccttggacttttggcctacggggaggtgggccgcaagcccatcagcttctacatc
cgtgacgccttgcagctgattggccgtgcggtcaccgcggcgaccatggtgaggccggac
ctggcgctgattcagaacatggtgaattgttacgacaaaccaaacggacatgagctgccc
tcttcgggacaatatctggccaggtttctgtccaacacgtcctttaccggggccacgggt
ttgatccaggtggacgccggcttgtcccgggtcctctcctcccagctgttccacgtctgg
agcctgaagagaggcgctctcggccagccggcctgggtgactgtgggccagtggacccga
ggcaggctggagctagaagggggcatcctgggactggtgggagggttcaggagcagccag
ggacaaggtctcggagccggggtgaggggaggcgacggccagggggacagtaacgtcgga
ggacgctggaggcccggagaatccgtcgagggacaccggctgagggtggtgacgctggtg
gagcacccgtttgtcttcacgcgagaggtggatgaggatggactgtgtcccgccggtcag
ctctgtctggaccccagaaccaaccggtccgacctaatccagagcctcttcaaccagctg
cacaacccaaacaccacacttgcagactgggaggggaatgaactaccggaggacctgagg
aagtgctgctacgggtactgcgtcgacttgttggagaagctagccgaggacatgggcttc
acctttgacctttacatcgtgggcgacgggaagtacggcgcgatgagcggcacgggccgc
tggacggggctggtcggggacctgctgagcgggaccgccgacatggccgtgtcctcgttc
tccatcaactccgccaggagcagagtcatcgacttcacctcgcccttctactccaccagc
ctcggcatcctggttcgtagccaggacacggccgcccctatcggagccttcatgtggcct
ctccactggtccatgtgggtgggcatcttcgtcacgctgcatctcaccgcgctcttcctc
accttgtacgagtggaacagccccttcggcatgacgccccacggcaggaaccggctgcgc
gtcttctcctactcctccgccctcaacctctgctacgccatactgttcggacggactgtc
gccaccaagactcccaaatgctggaccggccgtttcctcatgaacctctgggccatcttc
tgcctgctggtgctgtccagctacaccgccaacctcgcggccgtcatggtcggggagaag
accttcgagcaggtctcgggaattcacgacgacaagctgcaccatccgtccctgggcttc
cgcttcgggacggtgagggagagcagcgccgaggattacatgaagaagagcttcccggag
atgcacgactacatgcgacgcttcaatcagcccaccacgccggagggcgtgcacatgttg
aagacggatcctcctgccctggatgcgttcatcatggacaaagccctgctggacttcgag
gtctctatcgacgccgagtgcaaactgctcactgtggggaagcccttcgccattgaaggc
tacgggataggcctgccccaggcctctcctctaacccgtaatgtgtccgagttcgtgagt
cgctacaagtccgacggcttcatggacatgctgcatgacaaatggtacaaggtggtgccc
tgcgggaagcgcgtctttgccgtcaccgagactcttcagatggggatccagcatttttcg
ggcctgttcgtgctgctgtgtatgggggtgggcggagccttgctgaccttggcaggtgaa
cacaccttctatcacctggtcatcccccgcctccgacgcacacacacgctgcagtactgg
ctgcacaccagccagaaaatccacagagccctccacgccacgtacgaggacgacgggaag
gagctgaccgacctcgaccaaaacccctcctcttgtatctcagagaactgcaccctccac
aggaagcagcatcagcctcctcccccatctcctcccacgtccctccctgcttccactacc
gccggagacacctgcaactcctcaccctcccacgagcccaaggagaagcgcgtgcacttt
gacctggagaccctgcacagctaccgcctgcgcacgcacaccgcctcggtgcgcggcagg
cccggcatggtcggccgccccggcctcggcctgggaggctggggcctggggaacatgggg
ggttttacctcccctccgcggattagcctgcaggccaacgggggccccgtctcttcgctg
gcgtccgcgggcttagtgctctctcccctggggagcagggccgctcagaccagcctgtgg
gaaggggagctccaggacctgcaggggaagatcgagacgttccgcacccagctgagagag
gctctggcccggagggcggagatccagagcagcctggagagagagcggtgcggactggtg
cgccgggacaccagcctggagagggacagacagaggacgcacaccattaacacagacaga
agcagctccactcagcccaaactccctgagagagacaggacgggccaactgcaaaccctg
aataatcaacaagcggggcgggacaaccaatcgggcggcccctggaccctggagcaccac
gggaggagcagccaattgaacacagtgaacagtttggacagaggcagagggaaccagtta
cgctccgtcagcactctgacgggagagaggactgtccaatcgcgcacttccgccagtctg
gagcgaagtcgagtcaaccaaccgggggccgggaacgcgcccgtccaatcgcggaacact
tcgagcctggacagacagatggccaacctgtcgcgcactctgaacactctcgagaggacc
gccaaccaatcgggtgtcggcagtgagacttga
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