Colletotrichum lupini: CLUP02_08292
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Entry
CLUP02_08292 CDS
T08561
Name
(RefSeq) uncharacterized protein
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
clup
Colletotrichum lupini
Pathway
clup03022
Basal transcription factors
clup03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clup00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLUP02_08292
09124 Replication and repair
03420 Nucleotide excision repair
CLUP02_08292
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
clup01001
]
CLUP02_08292
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clup03021
]
CLUP02_08292
03019 Messenger RNA biogenesis [BR:
clup03019
]
CLUP02_08292
03400 DNA repair and recombination proteins [BR:
clup03400
]
CLUP02_08292
Enzymes [BR:
clup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
CLUP02_08292
2.7.11.23 [RNA-polymerase]-subunit kinase
CLUP02_08292
Protein kinases [BR:
clup01001
]
Serine/threonine kinases: CMGC group
CDK family
CLUP02_08292
Transcription machinery [BR:
clup03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CLUP02_08292
Messenger RNA biogenesis [BR:
clup03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
CLUP02_08292
DNA repair and recombination proteins [BR:
clup03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CLUP02_08292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Kinase-like
Motif
Other DBs
NCBI-GeneID:
73342292
NCBI-ProteinID:
XP_049144425
LinkDB
All DBs
Position
4:join(4013118..4013337,4013410..4014419)
Genome browser
AA seq
409 aa
AA seq
DB search
MSASPLVVRPADALKPAGAVGSPFRNLSSAQVSSGNGTPQPSKDKKAAPIPTTAPTLDLA
EQMNEVEKKQYVKGKKLGEGTYAIVFLGHLRSNTSSLVAIKKIKVQKEYQEGMAPDAVRE
LKHLQELQHPNIISLLSVFSSKDQNLNLVLEYLPLGDLEMLIKDTANVRYGAADIKAWMG
MLTRGVWFCHENFVLHRDIKPNNLLIAADGEVKLADFGLARSFADPYQVMTNQVITRWYR
PPELLFGAKHYSGAVDVWSVGCVFAELIIRAPYMPSETEVQQISLICRAVGTPTEDNWPG
VTKLPAYTVPDDAEPVKGRDFYQAMFGTVGPEGVDLLMKTFILDPKKRITARDMLNHNWW
RTEPKPSRKEDLPKKGGGEEKMGADLKRRPGMVDEDRGAKVARKLNFGA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcatcaccactcgtcgtccgtcccgccgacgcgttgaagccagcgggggctgtc
ggctcgccattccgtaatttgtcatcggctcaggtttcctcaggaaatggcaccccgcag
ccatctaaggacaagaaggccgcgcccatcccgacgacagccccgactctggatctcgcc
gagcaaatgaacgaggtcgagaagaagcaatatgtgaaaggaaagaaactcggagaaggt
acctacgccatcgtcttcctcggccacctccgatcgaatacatcctccctcgtcgccatc
aagaagatcaaggtccagaaagaataccaagaaggcatggcacccgacgccgtccgcgaa
ctgaagcaccttcaagagctccagcaccctaacatcatctccctcctctccgtcttctcc
tccaaggaccagaacctcaaccttgtcctcgaatacctgcccttgggtgacctcgagatg
ctcatcaaggacacggcaaacgtccgctacggtgccgcagatatcaaggcctggatgggc
atgctcacccgcggcgtctggttctgccacgaaaactttgtcctgcatcgcgatatcaag
cccaacaatttgctgatcgccgccgacggcgaggtgaagcttgccgatttcggtctcgcg
cggagctttgcggacccgtaccaggtcatgacgaaccaggttatcacgcgctggtaccgc
ccgcctgaattgctctttggcgcgaagcactacagcggcgccgtcgacgtctggagtgtt
ggatgcgttttcgcggaactcattattcgtgcgccgtacatgccgtccgagaccgaggtt
caacagatttccctcatttgccgtgccgtcggtacaccgacggaggataattggcccgga
gtgaccaagcttccagcctacacggtgccggatgatgccgagcccgtcaagggcagggat
ttctaccaggccatgttcggcaccgtgggtcctgagggtgtcgatctcctaatgaagaca
ttcattctcgatcccaagaagcgcattaccgcacgagacatgctgaaccacaactggtgg
cgcacggagccgaaaccttcacgcaaggaggacctccccaagaaaggtggcggcgaagaa
aagatgggcgcggacctgaagcgacgtccaggcatggttgatgaggataggggtgccaag
gtggctcgcaagctcaactttggagcttaa
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