Clavispora lusitaniae CBS 6936: A9F13_01g05335
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Entry
A9F13_01g05335 CDS
T05147
Name
(GenBank) putative DNA-directed RNA polymerase II subunit
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03020
RNA polymerase
clus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A9F13_01g05335
09124 Replication and repair
03420 Nucleotide excision repair
A9F13_01g05335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clus03021
]
A9F13_01g05335
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_01g05335
03400 DNA repair and recombination proteins [BR:
clus03400
]
A9F13_01g05335
Transcription machinery [BR:
clus03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
A9F13_01g05335
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
A9F13_01g05335
DNA repair and recombination proteins [BR:
clus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
A9F13_01g05335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
Motif
Other DBs
NCBI-ProteinID:
OVF11078
UniProt:
A0AA91Q4F9
LinkDB
All DBs
AA seq
152 aa
AA seq
DB search
MDQYLRDKLLSDVEGTCTGQFGYIVCVLDCMNIDVGRGRIIPGSGMAEFEVKYRAVVWKP
FKGEVVDAVVTTVNKMGFFADVGPLSVFVSTHLISSDMKFNPSANPPAYVSPDETIEKGS
RVRLKIVGTRTDVNEIYAIGSIKEDYLGPSPM
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtacttgcgagacaagttactcagtgatgttgaaggtacatgtactggtcag
tttggttacattgtgtgtgttttggactgtatgaatattgacgttggccgtggcagaatt
atacctggaagtggaatggctgagtttgaagtcaagtatagagcggtggtatggaagcct
ttcaagggagaggttgtcgatgctgttgttaccactgtgaataagatgggctttttcgca
gacgttggacctttgtcggtttttgtcagtactcacttgatatcgtccgacatgaaattt
aacccatcagccaatcctccagcatacgttagtcccgatgagacgatcgagaaaggatct
cgtgtaagattgaagattgtgggtactagaacagacgtgaatgagatttatgctattgga
agtataaaagaagattacttgggcccaagtccaatgtga
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