Clavispora lusitaniae CBS 6936: A9F13_18g00572
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Entry
A9F13_18g00572 CDS
T05147
Name
(GenBank) putative mRNA cleavage and polyadenylation factor
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
A9F13_18g00572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clus03019
]
A9F13_18g00572
Enzymes [BR:
clus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
A9F13_18g00572
Messenger RNA biogenesis [BR:
clus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
A9F13_18g00572
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
AAA_19
AAA_16
Motif
Other DBs
NCBI-ProteinID:
OVF06745
UniProt:
A0AA91PWB9
LinkDB
All DBs
AA seq
463 aa
AA seq
DB search
MSLEQSGEIQLDEGCEWRFEVPFKTILALKVVDGIGEIFGTELPNDTEIHLTGAKAAVYA
PLPAGCRFQYSCSLNKENVNISSEDAKVSEYVSDESAVPAYTRLHFALDVKRQQAQASAA
RGPVVMVVGGAQCGKTALVKILASYAAKMDRCPLLVNLDPQQGVFSVPGSLTAAVVSDAL
DLEAVGGWGESPTSGAAFRQPKQPLVKSYGFCAPQDNSELFEHQAGALAAAAHERMASDA
NVRASGMIIDTPPWTMKDADLVQKIVERFEVDVVIAVGGDRLAVDLRRTFQSRVDENRLD
IVKVPRAGGVAEVDGAFLRKTQEDSIKEYFNGSRRTHLSPFKTDVDVKSVVIYKAVRLSE
YTSQMAFLPSGDSYTQEDTKPDLALDKYYVRIEATSANLENCVLAITQLDASEEPSKLLE
TSVLGYVHVSTVDDTKQRMSMLLPFPGQIPRKVLIATDIRYTE
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttgaacagagcggcgagatccagctcgacgaaggctgtgaatggcgctttgaa
gtgcccttcaaaaccatcttggcgctcaaagttgtcgatggcattggcgagatttttggc
acggaacttcccaacgacaccgaaatccatcttacgggagcaaaagccgccgtgtatgcg
cctttgccggccgggtgccgtttccaatactcttgctcgctcaataaagagaatgtcaac
atctcgagcgaagacgccaaagtcagcgagtacgtgagtgatgaatctgctgttcccgcc
tatacgcggctccattttgcgttggatgttaaaagacaacaagcacaggcatcggcggct
agaggacccgttgttatggttgtgggtggcgcccagtgcggcaaaacagccctcgtgaag
atattggcctcgtacgccgcaaaaatggacagatgcccgcttttggtcaacttggacccg
cagcagggcgttttctctgtgcccgggtcgttgacggccgcagttgtaagcgacgccctt
gacttggaggcggtaggtggctggggcgagctgccgacactgggagcggcgtttcgccag
cccaaacagcctttggtcaagagctacggcttttgcgccccacaggacaactccgagctc
tttgaacaccaggcaggcgcccttgctgcggccgcacatgaacgcatggcgtcagacgcc
aatgtccgtgcttctggcatgattatcgatacgccgccctggacaatgaaggacgcagac
ctcgtacagaaaatcgtggagcggtttgaggtcgacgttgtgattgccgtgggcggagat
agacttgccgtcgaccttcggcggacgtttcagtctcgcgtggacgaaaaccgcttggat
attgtcaaggtgcctcgtgccggcggagtggccgaggtagacggagcgtttttgcgtaag
acacaagaggacctgatcaaagagtacttcaacgggtcgcgacgcacgcacttgtcgccg
ttcaaaaccgacgtggatgtcaagtccgtggtcatatataaggctgtgcgtcttctggag
tacacttcccaaatggcattcttgccttctggagactcgtacacgcaggaggacacgaaa
ccagacttggccttggacaagtactacgtgcggatcgaggctacaagcgccaatttggag
aattgtgtgttggcgatcacgcagttggatgcatctgaagagccgctgaagttgttggag
acgtctgttctcggctacgtacatgtgtcgactgtggatgacaccaagcaaagaatgtcc
atgttgttgccttttccgggacagatcccaagaaaggtgctcattgcaactgacattcgg
tacacggagtaa
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