Clavispora lusitaniae CBS 6936: A9F13_23g00814
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Entry
A9F13_23g00814 CDS
T05147
Name
(GenBank) putative DNA-directed RNA polymerase subunit
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
clus
Clavispora lusitaniae CBS 6936
Pathway
clus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
clus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A9F13_23g00814
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clus03021
]
A9F13_23g00814
Enzymes [BR:
clus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A9F13_23g00814
Transcription machinery [BR:
clus03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
A9F13_23g00814
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
OVF05463
UniProt:
A0AA91PWK6
LinkDB
All DBs
AA seq
1647 aa
AA seq
DB search
MDISKPVGSEITSVDFGVLSSDEIRKLSAKQITNPIVFDNLGHTVSNGLYDLALGAFLRN
LCTTCGLDEKFCPGHQGHIELPVPVYNPLFFNQMYIFLRSSCLYCHHFKLNELEVHKYIC
KLRLIQYGLLLECHELEVMSAQDGSSKDDDEDGSSASANASDPQFKSIVKQKREEFVETA
IATAISEGRTSHTGLITETVGEERKHIIQDFYRRLLSRSKCENCGMFSPTYRKDGFTKIF
ENALREKQISSNRVKGLVRPDMLKKNPSSSSSASSEKIPSIKSKSGSKYVLSTEVKNILK
GVFDNEQAIMQKLFHSRPQNKAPVSSDMFFIQALIVPATRFRLPSKLGDEIHENSQNELL
SNILKTSLLIRDLNDQISGMFSKEKTAGVEERKILFNRLMNAFVTIQNDVNAFIDSTKNQ
NAQAGKMPVPGIKQALEKKEGLFRKHMMGKRVNYAARSVISPDPNLETNEIGVPPVFAVK
LTYPEPVTAYNVAELRQAVINGPDKWPGAIQVQNEDGSMVSLIGMTLEQRKAIANQLLTP
SNGATVINKKVHRHIKNKDVVIMNRQPTLHKASMMGHKVRVLPGEKTLRLHYANTGAYNA
DFDGDEMNMHFPQNENAKAEALNLANTDSQYLTPTSGSPLRGLIQDHISAGVWLTNKDSF
FTREKYQQLIYGCIRPEDGHTNGATRIVTVPPAVFKPEPLWTGKQVITTILLNIKPKGVP
GINLVSKNKIKDDYWGKGSRENEVLFRNGELLSGILDKSQYGASAYGIVHSLHEVYGPDT
ASKALSVLGRLFTNYIMMTAFTCGMDDLRLTDEGNAWRKDILKQSVDIGRAAACEVTNLD
SSTTSSDSELLKRLEEILRDDNKSGILDAITQSKVNAITSQVVSKCVPDGTMKRFPYNSM
QAMALSGAKGSGVNVSQIMCLLGQQALEGRRVPVMVSGKTLPSFKPYETDARAGGYIKGR
FYSGIRPQEYYFHCMAGREGLIDTAVKTSRSGYLQRCLTKQLEGIHVSYDNSVRDGDGSL
LQFLYGGDAVDTTKQSHMNQYKFCLDNYDALLAKYNPGELTEHLDTDTALSYSKKVRKNL
KKQKDLPHYNQSTKYDPVLSVFNPAKYLGAVSEKFQEKLDDFVNQHSDLFAKHSSDGVSE
KKFRALMQLKYMRSLIQPGESVGIIAAQSIGEPSTQMTLNTFHFAGHGAANVTLGIPRMR
EIIMTASASIKTPQMTLPLLDDVSDDMADSFCKSIGKVCLSEFIDKVVVTETTGTDDGTS
YRSYKVKIVFFTKKEYEEEYDIAQEQLQNTVATKFLAKLELAISKEMKKQTRSDSLPTVG
KAVPKAQTDAALAPKTIGEEGEDGDASDDKLRANTKQAVSYDAPDEDEEKMRRAEQTSDE
EMEESETESGSESESESDSDDDNMVVDEAKESKPKDTKPKTLTKSAKDRQADVVSSHHFV
KKYDFDDENGEWCEFEIELLGDVQKLLMVNIIEDLCRQVVVREIKNIGRCLRPQPENGRR
VLTTEGVNFKAMWEQDDFIDVNGVRSNDISAVLRTYGVEAARNTIVNEINNVFSTYAISV
SSRHLDLIADMMTREGSYLAFNRQGIDSSTSAFKKMSYETTCQFLTKAVLDGDREDLESP
SARIVMGKLSNVGTGSFDVMAQMPTVA
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggacatttccaagcctgttgggtcggagattacttcggtggatttcggcgttctatcc
agcgacgaaatcagaaagttgtctgctaagcaaatcaccaaccccattgtttttgacaat
ttgggccataccgtcagcaatggtttgtacgacttggcgttgggcgctttcctcagaaac
ttgtgtaccacatgtggcctcgacgaaaaattctgtcccggccaccagggccacattgag
ttgcccgttcccgtgtacaacccgttgttcttcaaccagatgtacatcttcttgagatcg
tcgtgtctctactgccaccacttcaagttgaacgagttggaggtccacaagtacatctgc
aagttgcgtttgatccagtacggcttgcttttggagtgccacgaattggaggtcatgtct
gcacaagacggctcttctaaagatgacgacgaggatggaagctctgccagcgccaacgcc
agcgacccgcagttcaagagcattgtcaagcagaaaagagaggagtttgttgagaccgcc
attgccactgccatcagcgaaggcagaacttcgcacaccggtttgatcaccgaaaccgtc
ggagaggagagaaagcacatcatccaagacttttacagaagattgctctccagatccaag
tgtgagaactgtggcatgttctcccctacctacagaaaggacggcttcaccaagattttc
gaaaatgccttgagagaaaaacagatttccagcaacagagtgaaaggcttggtgcgtccc
gacatgctcaagaaaaacccttcttcgctgtcatctgcttcgtccgagaaaattccttcc
atcaagctgaagtcgggctccaagtacgtcttgtcgacagaggtgaaaaacatcttgaag
ggtgtgtttgacaacgaacaagccatcatgcagaagcttttccactccagaccacagaac
aaggccccagtcagctcagacatgtttttcatccaggcgttgattgttccagccacaaga
ttcagattgccttccaagttgggcgatgagattcacgaaaactcacaaaacgagctcttg
tccaacatcttgaaaacctcgcttctcatccgtgacttgaacgaccaaatctcaggaatg
ttttccaaggagaaaaccgccggtgtggaagagcgcaagatcttgttcaacagattgatg
aatgcatttgtcaccatccagaacgacgtcaatgcattcattgactccaccaaaaaccaa
aacgcccaggccggcaaaatgcctgttccgggcatcaaacaagccttggagaagaaagaa
ggtttgttccgtaagcacatgatgggtaagagagtcaactacgctgcccgttctgtgatt
tcgcccgaccctaatttggaaaccaacgagattggtgttccgccagtgtttgccgtcaag
ttgacctaccctgaacctgtcacggcctacaacgttgctgagttgagacaggcggtcatc
aacggtccagacaagtggccgggcgctatacaagtgcaaaacgaagacggctcgatggtg
tctttgattggcatgactcttgagcaaagaaaggccattgccaaccaattgttgacccct
tcgaacggagccaccgtgatcaacaagaaggtgcacagacacatcaagaacaaggacgtg
gtgatcatgaaccgtcagcctacattgcacaaggcctctatgatgggtcacaaggtgcgt
gtgttgccaggagaaaagacgttgagattgcactacgccaacaccggagcgtacaatgcc
gatttcgacggagacgagatgaatatgcatttccctcagaacgagaatgccaaagccgag
gcactcaacttggccaacacagactcgcagtacttgactcctacatctggatctccattg
agaggtttgattcaggatcacatttctgccggtgtgtggttgaccaacaaagacagtttc
ttcacgagagaaaagtaccagcaattgatctacgggtgcatccggcccgaagacggacac
accaatggcgccacgagaatcgtgactgtgccacctgctgtgttcaagccggagcctttg
tggacaggaaagcaggtgatcaccacgattttgttgaacatcaagccaaagggtgttcct
ggcatcaacttggtgtcgaagaacaaaatcaaagacgactactggggcaagggctcgcgc
gagaacgaggttttgttccgcaacggtgagttgttgagcggtatcttggacaagtcgcag
tacggtgcctctgcctacggtattgtgcattcgttgcacgaggtgtacggcccggacacc
gccagcaaagccttatcggtgttgggccgtcttttcaccaactacatcatgatgacggcc
ttcacttgtggtatggacgacttgcgtttgaccgacgaaggaaacgcctggagaaaagac
atcttgaagcagtcggttgacattggccgtgcggcggcgtgtgaagtgaccaacttggac
agctcgacgaccagcagcgacagcgagttgttgaagcgtttggaggagattttgcgtgac
gacaacaagtcaggcatcttggatgccatcacccagtccaaggtcaatgccatcacgtcg
caggtggtgagcaagtgtgtccccgacggcaccatgaagagattcccatacaactccatg
caggcgatggccttgtccggagccaaaggttcgggtgtcaatgtgtcgcagatcatgtgt
cttttgggccagcaggcgttggaaggcagaagagtgccggtgatggtgagtggaaagact
ttgccctcgttcaagccgtacgagaccgatgcgcgggccggtggttatatcaagggccgt
ttctactcgggaatccgtccgcaggagtactacttccattgtatggcgggccgtgaaggt
ttgattgatactgccgtcaagacttccagatcgggttacttgcagcgttgtttgaccaag
cagttggaaggtatccacgtttcctacgacaactctgtgcgtgacggagacggctcgttg
ctccagttcttgtacggaggagacgctgtcgacaccaccaagcagtcgcacatgaaccag
tacaagttctgcttggacaactacgacgccttgttggccaagtacaacccaggcgaattg
acggagcatttggacaccgatacggcgttgtcctacagcaagaaggtccgcaagaacctc
aagaagcaaaaggatcttcctcactacaaccagtccaccaagtacgacccggtcttgtcc
gtgttcaacccggccaagtatttgggtgcagtttcggaaaaattccaggagaagctcgac
gactttgtgaaccagcacagtgacttgttcgccaagcacctgagcgatggcgtgagcgag
aagaagttccgggcgttgatgcagttgaagtacatgcgctcgttgatccagccaggagag
tctgtgggaatcattgccgcacagtccattggtgagccatcgacgcagatgacgttgaac
actttccactttgccggtcacggtgccgccaacgtgacgttgggtattccgagaatgaga
gaaatcatcatgaccgcctcggcgtcgatcaagacgccacagatgaccttgcctcttttg
gacgatgtcagcgatgacatggctgactccttctgcaagtccatcggtaaggtgtgcttg
agtgagtttatcgacaaggtggtggtgacagaaacaaccggtactgacgatggcacaagc
taccgttcgtacaaggtcaagattgtgttcttcaccaaaaaggagtacgaggaggagtac
gacattgcccaggagcagttgcagaacaccgtggccaccaagttcttggccaagttggag
ttggctatttctaaagaaatgaagaaacaaacccgctcggacagcttgcctactgtgggc
aaggccgttcctaaggcccagactgatgcggctttggcaccaaagaccatcggcgaagaa
ggcgaagacggagatgcttccgacgacaagctccgggccaacaccaaacaggctgtttca
tacgacgcaccagatgaagatgaggagaagatgcgccgtgccgagcagacgtcggacgag
gagatggaagagtccgagacggaatctggctcggagtcggaatctgagtcggactccgat
gacgacaacatggttgtggatgaggccaaggaaagcaagccaaaggacaccaagccaaag
actttgaccaagagtgccaaggaccgccaggccgacgttgtgtcgctgcaccactttgtc
aagaagtacgactttgacgacgaaaacggtgaatggtgtgagtttgagatcgagcttctt
ggtgatgtgcaaaagttgttgatggtcaacatcatcgaagacttgtgtcgccaggttgtt
gttcgtgagatcaagaacatcggcagatgtcttcgcccacagccagagaatggtcgccgc
gttttaaccaccgagggtgtcaacttcaaggccatgtgggagcaggacgactttattgac
gtcaacggtgtccgttccaacgacatcagtgctgtgttgagaacatacggtgtggaggcg
gccagaaacaccattgtcaatgaaatcaacaacgtgttttcgacatacgccatttcggtg
tcgtcacgtcatttggacttgatcgccgacatgatgactcgtgaaggttcgtatcttgcg
ttcaacagacagggcattgactcgtccacttcggcattcaagaagatgtcgtacgaaacc
acatgccagttcttgaccaaggcggttttggacggcgacagagaggacttggaatcgccc
tcggctcgtattgtcatgggcaagttgtccaatgtgggtacgggctcgttcgatgtgatg
gcccagatgcccactgtggcatga
DBGET
integrated database retrieval system
