Columba livia (rock pigeon): 102089066
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Entry
102089066 CDS
T02912
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clv04040
]
102089066 (SCN4A)
Ion channels [BR:
clv04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102089066 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
102089066
NCBI-ProteinID:
XP_021151261
LinkDB
All DBs
Position
Unknown
AA seq
1842 aa
AA seq
DB search
MANLPHIPGPENLRPFTPASLAAIEQRILEAEALKIKRQQVELPEEEEIKPSSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYLLGPFHPIRRG
AIKVLVHSLFSMFIMITILTNCVFMTMSNPPAWSKNVEYTFTAIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPLNDTLMGDMGLDNDTLTN
ATLYGNFADGNFTDGNFTANFTSNSTFDFEAYINDEANFYFLEGALDALLCGNSSDAGKC
PEGYQCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLVAHFAGKTYMIFFVV
VIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKHQEEQEKLLQDR
QSSSGSLPSGVAEKEGDSDLNSDQEKAKDGKGQVVPKVVLERQATVINFNQTNDLEKSDH
NHLTVGNQDGPGLEKRVGSAISVISNTVEELEEAHQKCPSWWYKFAHMFLVWNCCPPWVK
LKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMV
LKLIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTL
NMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYMECVCKISLDCMLPRWHMHD
FFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSFS
ADSLAASDDDGEMNNLQIAIGRITRGIDFVKSSIIMLLRRLWKGKKVAPEEEQEHSKREN
SVLNHVYTGQEPKSEYLDRVTGKEHYLMDELDHMNFINNPNLTVQVPIASEESDLYEETS
TQSDTEDAKNPLSSDNASSMCSTVDYKPPLLEEEEEAEEAEESNEPEECFTEACVKRCPC
LYVDITSDRGKVWWNIRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTI
LEYADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLTANWLGYSELGA
IKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAG
KYYRCVNTTTGELFDITVVNNKSDCMALLHTNEVRWVNVKVNFDNVGLGYLSLLQVATFK
GWMDIMYAAVDSREIEEQPQYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKK
FGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQGMVFDFVTKQVFDITIMILIC
LNMVTMMVETDDQSELKTSILYKINLVFIVIFTGECVLKMFALRYYYFTIGWNIFDFVVV
ILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFN
IGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWDGLLNP
ILNSGPPDCDPELENPGSSIKGDCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFNVA
TEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLKIPKPNKIKLITM
DLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLKR
KHEEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDALKEDAPEKEGLIATKMQEIYGN
SGTDVGTAPAFGLAPVAGSETRDAPGEAKTRGKERVVKESLV
NT seq
5529 nt
NT seq
+upstream
nt +downstream
nt
atggccaacctgccacacatcccgggccccgagaacctccgtcccttcacccccgcctca
ctggctgccattgagcagcgcatcctcgaggcagaggctctcaagataaagcggcagcaa
gtggagctgccggaggaagaggagatcaagcccagcagtgacctggaagccgggaagaac
ctgcctcttatctatggtgacccaccgctggagctcattgggacacccttggaggacctg
gacccattctacaaggataagaagacattcatagtcctcaacaaagggaagtccatcttc
cgcttctcagcaacccctgccctctacctgctgggccccttccaccccatccgcagagga
gccatcaaagtgctcgtccattcattattcagcatgttcatcatgatcacaattttaacc
aactgcgtgtttatgacgatgagcaaccccccagcgtggtccaagaacgtggaatacacc
ttcaccgcaatatacaccttcgagtccctcatcaagatactgtcgagaggcttctgcatt
gatgacttcacattcctgcgtgacccgtggaactggctggacttcatggtcatctccatg
gcctacatcactgagttcgtggacctggggaacatctctgctctcaggaccttccgtgtc
ctccgtgccttgaaaaccatcaccgtgataccagggctgaagacaattgttggggctctg
atccagtcagtgaagaagctctcagatgtcatgatcctcacagtcttctgcctgagcgtc
ttcgccctcatcggcctccagctcttcatggggaaccttcggcagaagtgtgtgcggtgg
ccccccctcaatgacaccctgatgggggacatggggctggacaatgacacgttgaccaat
gcaactctctatggcaactttgctgatggcaacttcactgacggcaacttcaccgccaac
ttcaccagcaacagcacttttgattttgaggcctacatcaacgatgaagcaaatttctac
tttctggaaggagcgctcgacgccctgctctgcgggaacagcagcgatgctgggaagtgc
cctgaagggtaccagtgcatgaaggcagggaggaaccccaactacggctacaccagctac
gacaccttcagctgggctttcctggccctcttccgtctcatgacacaggactactgggag
aacctcttccagctggtagcacattttgcagggaaaacatacatgatcttcttcgtggtg
gttatatttcttggttccttctacctcatcaacctcatcctcgccgtggtggccatggct
tacgcagaacaaaatgacgccacaatgctggaggagcagcagaaggaggaggaatttcag
cagctcatggagcagctgaagaagcaccaagaggagcaagagaagttgttgcaggaccgt
caatccagcagtggttccctgcccagcggagtggccgagaaggaaggtgactcggacctg
aacagcgaccaggagaaggcaaaggacggcaaagggcaggtggtccccaaggtggtgctg
gagcgccaggctacggtgatcaatttcaaccaaaccaatgatctggagaaatcagaccac
aaccacctcactgtgggcaaccaagatgggccaggcctggagaagagggtggggagcgcc
atcagcgtcatctccaacacggtggaagagctggaggaagctcaccagaaatgcccatcc
tggtggtacaaatttgcccacatgttcctggtctggaactgctgccctccgtgggtgaag
ctgaaagagtttgtcaagctggtggtcatggaccccttcgtggacttgggcatcaccatc
tgcatcgtgctcaacacgctcttcatggccatggagcattaccccatgacggaggagttc
gagaacgtgctgaccgtggggaacctggtctttacggggatcttcacagcagagatggtc
ctgaagctcatcgctttggacccctacgagtatttccagcagggctggaacatcttcgac
agcatcatcgtcaccttgagcctggtggagctgggcttggccaatgttcaagggctctct
gtgctccgctctttccgcttgttgagggttttcaagctcgccaagtcctggcccactctc
aacatgctcatcaagatcatcggcaactcagtgggcgccctggggaacctcacgttggtg
ctggccatcattgtcttcatcttcgccgtggtgggaatgcagctctttgggaagagctac
atggagtgcgtgtgcaagatctccctcgactgcatgctgccccgctggcacatgcatgac
ttcttccactccttcctcatcgtcttccgcatcctctgcggggagtggatcgagaccatg
tgggactgcatggaggtggctggccagaccatgtgcctcattgtcttcatgatggtcatg
gtcatcgggaaccttgtggtgctgaacctcttcttagctttgctgctgagctccttcagc
gctgacagcctggcggcgtctgatgacgatggagagatgaacaatttgcagatcgctatt
ggcaggatcactagagggatcgactttgtgaagtcctctatcatcatgctgctccgcagg
ctgtggaaggggaagaaggtggcaccagaggaagagcaagaacacagtaagagagaaaac
tctgtgctgaaccacgtgtacacgggtcaggagcccaagtcggaatatctggacagagtc
actggcaaagagcattatctcatggatgaactggaccacatgaatttcattaacaacccc
aacctgacggtgcaagtccctatcgcatcggaggagtccgacctctatgaggagaccagc
acccagtccgacactgaagatgccaagaatcccctctccagcgacaacgcatcgtccatg
tgcagcactgtggattacaagcccccgctgctagaggaggaggaggaggcagaagaggca
gaggagagcaacgagcctgaggagtgcttcaccgaggcctgcgtgaagaggtgtccctgc
ctctatgtggacatcaccagtgacagagggaaggtttggtggaacatccggaaaacctgc
ttccgcatcgtggagcacgactggtttgagaccttcatcgtcttcatgatcctcctcagc
agtggggcgctggcttttgaggacatctacatcgaacaacgcaaggtgatacgcaccatc
ctggagtatgccgacaaagtcttctcctacatctttgtcatcgagatgttgctcaagtgg
gtggcctacggcttcaaggtgtacttcaccaacgcgtggtgctggctggatttcctcatc
gtcgatgtttccatcatcagcctgacagcgaactggctgggatactccgagctgggagca
atcaagtccctgcggacactgagggctctgagaccactgcgcgccctctccagatttgaa
ggcatgagggtggtggtgaacgccttgctgggtgccatcccctccatcatgaacgtcctg
ctggtctgcctcatcttctggctgatattcagcatcatgggggtgaacctctttgcgggg
aagtactaccgatgtgtcaacaccaccacgggcgagctcttcgacattaccgtggtaaac
aacaagagtgactgcatggccctcctccacaccaacgaggtcagatgggtcaacgtcaag
gtcaactttgacaacgtgggcttgggatacctctccttgctgcaggtggcaaccttcaag
ggctggatggacatcatgtacgctgccgtggactcgcgcgagattgaagagcagccacag
tatgagatcaacctctacatgtacatctactttgtcatcttcatcatcttcggtgccttc
ttcaccctgaacctcttcattggcgtcatcatcgacaacttcaaccagcagaagaaaaag
tttggaggcaaagacatcttcatgacggaagagcagaagaaatactacaacgccatgaag
aagctcggctccaagaaaccccagaagcccatccccaggccatcgaacaagtttcaaggg
atggtgtttgactttgttacgaagcaggtgtttgacataaccatcatgatcctgatttgc
cttaacatggtgaccatgatggtggaaacggatgatcagagcgaactcaaaacatctatt
ctctacaagatcaacctggtcttcattgtcatcttcactggagagtgtgtgctcaaaatg
tttgccttgcgctactactacttcactatcggctggaacatctttgactttgtggtggtc
atcctctccatcttaggtatcgtcctctcggacatcatagagaagtacttcgtatcaccc
accctcttcagggtcatcaggctggcaaggattggccgtgtcctccggctgatccggggg
gcaaaaggcatccggaccctcctgtttgctctgatgatgtccctgcctgccctgttcaac
attggtctcctgcttttcctcgtcatgttcatctactccatcttcgggatgtccaacttc
gcctatgtaaagaaagagtcagggatcgatgacatcttcaactttgaaacttttggaaac
agcatcatctgcctcttccagatcacaacgtcagctggatgggatggcctcctcaaccca
atcctgaacagtggtccccccgactgcgaccctgagctggaaaaccctggcagttctata
aaaggggactgtggcaatccatccatcggcatcttcttcttctgcagctacatcatcatc
tcctttctcatcgtggtgaacatgtacattgccatcatcctggagaacttcaatgtggcc
acagaggagagcagcgaacctctttgtgaagatgattttgaaatgttttatgagacctgg
gagaagtttgacccagacgccacccagtttatcgcatacagcaccttgtctgactttgta
gacaccttacaggagccactcaaaattcccaagccgaacaagatcaagctcatcaccatg
gatctaccaatggttgctggggacaaaatccactgcctggatatcctctttgccctgact
aaggaggtgctgggagactcaggagagatggacgccttgaaggccaccatggaggagaag
ttcatggccgcgaacccctccaaggtttcctatgaacccatcaccaccactctgaagagg
aaacacgaagaggtctgcgccacaaaaatccagagggctttccggaggtacctcctgagg
cgctcggtgaagcaggcgtcctacatgtaccggcacagcaaggacgaggacgccctgaag
gaggacgcgcccgagaaggaaggtctgatcgccaccaaaatgcaggagatttatgggaac
agtgggacagacgtggggacagcccctgcctttggtcttgcacccgttgctggctcagag
actcgcgatgctcctggcgaagcaaaaacacggggtaaggaacgtgttgtgaaggagtcg
ctggtataa
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integrated database retrieval system
