Columba livia (rock pigeon): 102090083
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Entry
102090083 CDS
T02912
Symbol
PRDM16
Name
(RefSeq) LOW QUALITY PROTEIN: PR domain zinc finger protein 16
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv00310
Lysine degradation
clv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102090083 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clv03000
]
102090083 (PRDM16)
03036 Chromosome and associated proteins [BR:
clv03036
]
102090083 (PRDM16)
Enzymes [BR:
clv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
102090083 (PRDM16)
Transcription factors [BR:
clv03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
102090083 (PRDM16)
Chromosome and associated proteins [BR:
clv03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102090083 (PRDM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_11
SET
zf-met
zf-H2C2_5
Zap1_zf1
zf-BED
Motif
Other DBs
NCBI-GeneID:
102090083
NCBI-ProteinID:
XP_021137491
LinkDB
All DBs
Position
Unknown
AA seq
1242 aa
AA seq
DB search
MYETDPDLLAGESAEEETEDSIMSPIPVGPPSPFPTSEDFTPKEGSPYEAPVYIPDDIPI
PPDFELRESSIPGAGLGIWAKKKIEVGERFGPYMAVQRSTLKEANFGWEQILTDAEVTSQ
EGNVKKVADELGTEKFGVDAGQSGSATWLKFIRGSCSCEEQNLALCHLNDQIYYKVIKEI
EPGEELLVYVKEGGYSLGNMAPSMEEEPTFRCEDCDELFQSKLDLRRHKKYACSAVGSLY
ESLSEDIKQEGLGDGQVYECKDCERMFPNKYSLEQHMVIHTEEREYKCDQCPKAFNWKSN
LIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGARAHACPDCGKTFATSSGLKQ
HKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQIKCKDCGQMFSTTSSLNKHRR
FCEGKNHYSPAGIFAPGLPLTPTSMMDKSKPSPTLNHASLGFNDYFPSRPHPGGLPFXXX
XXXXXXXXPGIFPPSLYPRPPLLPPTQLLKSPLNHTPDAKLPSPLGNPALPLISAVSNSN
QAAAGEEKCESSLENSYLEKLKARNSDMSDGSDFEDVNTTTGTDLDTTTGTGSDLDSDAE
SDRDKTKDKSKPIESKPDFVSSSVSAGSNNNTSEIPLFYSQHSFFPPPEEHLLPATGAAN
DSIKAIASIAEKYFGPGFMGMQEKKMGSLPYHSMFPFQFLPNFPHSLYPFAERTLNHNLL
VKAEPKSPRDLHKVGSTSSESPFDLTTKPKEIKPILPPPKVLPAPASGEEQPLDLSIGNR
IRASQNGGREPRKNHIYGERKLMASEVLPKISQSQLPQQPSLHYAKPSPFFMDPIYRVEK
RKVTDPVGALKEKYLRPSPLLFHPQMSAIETMTEKLESFAAMKADTGASLQPLPHHPFSF
RSPPPTLSDPILRKGKERYTCRYCGKIFPRSANLTRHLRTHTGEQPYRCKYCDRSFSISS
NLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLDRHLKKHEHENVPVSQHSGVITNHLGTSA
SSPNSESDNHALLDEKEDSYFSEIRNFIANSEMNQASTLADKRPEIQDIDGNSQCHGLAN
EKTEDVDDEDEELEEEDDDSLTGKSQDEAASPAAEPRGAFEDEEDEEPTSLTMSFEHSRR
CVEEDEAGLLDLEQMPNFGKGLDLRKAAEEAFEVKDVFNSTLDSETIKQTLYRQAKNQAY
AMMLSLSENAPLHASSQSSLGAWLDMAGAASESGTFNPINHL
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgtacgagaccgaccctgatctccttgctggcgaaagtgcagaggaggaaacagaggac
agtattatgtcccccattccggtcggacctccgtcaccctttcccaccagcgaggacttc
actcccaaggagggctcaccctatgaagctcccgtctacattcctgatgacattccaatc
ccaccagattttgaactcagagaatcttcgattccaggggcagggctagggatctgggcc
aaaaagaagattgaagttggggaaagatttggaccctatatggcagtacagaggagcaca
ttaaaggaagcaaactttggatgggagcaaatactgactgatgccgaggtgacctcccag
gagggcaatgtcaaaaaggtcgctgatgagctgggcacggagaagttcggagtggacgcc
gggcagagcggctccgccacctggctcaagttcatccgcggcagctgctcctgcgaggag
cagaacctggcgctgtgccacctcaacgaccagatctattataaagttattaaagaaatt
gagccaggagaagagctcttggtgtatgtgaaggaaggtggttattcccttgggaacatg
gcgcccagcatggaagaagagcccacgtttcgctgcgaggactgcgacgagctgttccag
tccaagctggacctgcggcggcacaagaagtacgcctgcagcgccgtgggctccctgtac
gagagcctgagcgaggacatcaagcaggagggactcggcgatgggcaggtctatgagtgc
aaggactgcgagaggatgttccccaacaaatacagcctggagcagcacatggtgatccac
accgaggagcgcgagtacaagtgcgaccagtgtcccaaggctttcaactggaaatccaac
ctgattcggcaccaaatgtctcacgacagcgggaaacggtttgaatgtgaaaactgtgtt
aaggtgttcacggaccccagcaacctgcagcggcacatccgctcgcagcacgtgggcgcg
cgggcgcacgcctgccccgactgcggcaagaccttcgccacctcgtccggcctcaagcag
cacaagcacatccacagcaccgtcaaacctttcatatgtgaggtctgtcacaagtcctac
acgcagttctccaacctgtgccggcacaagcggatgcacgcggactgccgcacgcagatc
aagtgcaaggactgcgggcagatgttcagcactacctcctccctcaacaagcaccgccgc
ttctgcgagggcaagaaccattacagccccgccgggatcttcgcccccggcctccccctc
acgcccacctccatgatggacaaatccaagccctctcccaccctcaaccacgccagcctg
gggtttaacgattatttcccatcccgcccgcacccggggggtctcccgttcnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnncccggggattttcccaccctctctgtaccccaggccc
cccttgttaccacccacccaactgctcaagagtcccctcaaccacactccggacgcaaag
ctgcccagccccctggggaacccggcgcttcccctcatctccgcggtgagcaacagcaac
caggccgcggcgggagaggagaagtgcgaaagcagcctggaaaactcctacctggagaag
ctaaaagccaggaacagcgacatgtccgacggcagcgacttcgaggacgtcaatacaacc
acgggcacagatctggacaccaccactggcaccgggtcggacctggacagtgatgcagag
agtgacagggacaaaacgaaagataagagcaaaccgattgagagcaagccagattttgtc
agcagctctgtgtctgcaggctccaacaacaacacgagtgagatccctctcttctattct
cagcattccttctttcctccccccgaagagcacctgctgccggccacgggagcagccaat
gactctattaaagctatcgcctccattgccgaaaaatattttgggcctggctttatgggg
atgcaagagaaaaagatgggttcgctcccctatcattccatgttcccctttcagttcctc
cccaacttcccccattctctctaccctttcgcggagcggaccctcaatcacaacttgctg
gtcaaggcagaaccaaagtcacccagggacctccacaaggtgggcagcaccagctccgag
tcgcccttcgatctcaccacaaagccaaaagagattaagccaatcttgccgccacccaag
gtcctgccagccccggcctccggggaggagcagccgctggatctgagcatcggcaaccgc
atccgggccagccagaacggaggaagagagccacggaaaaaccacatctatggggaaagg
aagctgatggcaagtgaagtcttacccaagatttcccaatctcaactgcctcagcagccg
tccctgcattacgctaagccatcaccctttttcatggaccccatatacagggtggagaag
cggaaggtgacggaccctgtgggtgccctcaaggagaagtacctgcgaccctccccgctg
ctttttcacccccagatgtcagccatagaaacgatgacggagaaactggagagttttgca
gccatgaaggcggacactggcgcgtccctgcagccccttccccaccaccccttcagcttc
cggtcgccgccgcccacgctgtcggatcccatcctgcgcaagggcaaggagcgctacacc
tgcaggtactgcgggaagatcttcccgcgctccgcaaacctgacgcggcatctgcggacg
cacaccggggagcagccctacaggtgtaaatactgtgacaggtcattcagcatttcctcc
aacctccagcggcacgttcgaaacatccataacaaggagaagccattcaagtgtcacctg
tgtaaccggtgctttgggcagcagaccaacctggaccggcacctgaagaagcacgagcac
gagaacgttccagtgagccagcactccggagtcatcacaaaccacctcgggaccagcgcc
tcctccccgaactcggaatcagacaaccatgcacttttagatgaaaaagaggattcgtat
ttctctgaaatcagaaattttattgcaaatagtgagatgaatcaagcgtcaaccttagca
gataaaaggccagaaatccaggatattgatggcaattcccagtgtcatggattagcaaat
gagaaaacggaagatgtggatgatgaagacgaagaactggaagaggaggatgatgacagc
ctgacggggaagtcccaggacgaggcagcatcgcccgccgcagagccccggggagcgttc
gaggatgaggaggatgaagagcccacatctctcaccatgagctttgagcacagccgaagg
tgtgttgaggaggacgaagccggcttgttagatttggagcagatgccgaattttgggaag
gggctggatcttcgcaaagcagccgaggaagcatttgaagttaaagatgtgtttaattcc
accttagactctgagacaataaaacagactctgtacaggcaggctaaaaaccaggcttat
gcaatgatgctgtccctgtccgagaacgctcccctccacgcgtcctcccagagctctctg
ggtgcttggttggacatggcaggagcagcttcagagtcggggacctttaaccccatcaac
cacctctga
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integrated database retrieval system
