Columba livia (rock pigeon): 102090174
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Entry
102090174 CDS
T02912
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clv03016
]
102090174 (CDKAL1)
Enzymes [BR:
clv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
102090174 (CDKAL1)
Transfer RNA biogenesis [BR:
clv03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
102090174 (CDKAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Styelin
Motif
Other DBs
NCBI-GeneID:
102090174
NCBI-ProteinID:
XP_005506080
UniProt:
A0A2I0LWE0
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MPAACDSVLEDIEDIVSAEDLKPHDRQFVRKNIFPKVRKRNSQKNIQTDDDPPSDSIIPG
VQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSAEADLWLLNSCTVKNPAEDHFRNS
IKKAQEGKKKVVLAGCVPQAQPRQDYLKGLSIIGVYLADRLLEVVEETIKGHSVRLLGQK
KDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVDRA
KQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEAIPEGAMLRLGMTNPPYILEHL
EEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKQVVDFLKEKVPGITIATDI
ICGFPGETDEDFQETMKLVEQYRFPSLFINQFYPRPGTPAAKLHQVPAAVKKQRTKDLSQ
LFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYEQVLVPKDPLLMGKMVEVNIYEA
GKHFMKGQPVSDARVYTASITRPLAKGEVSGLTEEFRHASQNGTNWKAHPSAKSPVKAAL
QSWMALQLPWQQEGGGLKILSVSLALLAVLVVFYYGGMKTEL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgcctgtgattcagtgcttgaagatattgaagatattgtgtcagcagaagat
ttgaagccacatgatcggcagtttgtaagaaagaatatttttccaaaagtgcgaaaacgc
aactcacaaaaaaatattcagacagatgatgatccaccaagtgacagcattattcctggt
gtgcagaaaatctggattcgtacatggggatgttctcacaataattcagatggtgaatat
atggctggacaactggctgcctatggatacaaaattacagacaactctgctgaagcagat
ttatggttgctgaacagttgtacagtaaaaaatcctgctgaggaccacttcagaaactca
atcaagaaagcccaagaagggaagaagaaagtggttttagcagggtgtgttccacaagcc
caacctcgtcaggactacctgaaaggcttgagtattataggggtatatttagcagacagg
ttattagaagttgtggaggaaactataaaaggtcattctgtgagactgctgggtcagaaa
aaggataatggaaaacgtctggggggagcacgactggatttgccaaagattaggaagaat
ccgctgatagaaataatttccatcaatactgggtgtctcaatgcatgtacctattgcaaa
actaagcatgccagaggagatctagcaagttatccaattgaagaactagtggacagagcc
aaacaatcttttcaagagggtgtttgtgagatatggctgaccagtgaagacacaggggct
tatggcagagacattggcacagacctccctacgcttctgtggaagctggttgaagctatt
cctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagagcatctg
gaggaaatggcgaagattctcaatcatccaagagtctatgcttttctgcacatacctgtc
cagtcagcgtctgatagtgtactcatggacatgaaaagagaatactgcgtggcagacttc
aaacaagtagtggatttccttaaagaaaaagtgcctggtataacaattgctacagacatc
atctgtggttttccaggagagacagatgaagattttcaagaaacaatgaaacttgtggaa
cagtacaggtttccaagcttgtttattaatcaattttacccacgcccaggaaccccagct
gcaaaactacatcaagttccagctgcagtgaaaaaacagagaacaaaggatctttcccag
ctgtttcattcatacaatccatatgatcataaggttggtgagaggcagagagttctggta
acagaagaatcctttgattccaattactacgttgctcacaatcctttctatgagcaggtt
cttgtgccaaaggatcctctgttaatgggtaagatggtagaagtgaatatttatgaagct
gggaaacattttatgaaagggcaaccagtgtcagatgccagagtttacactgcatccatc
accagaccgttagcaaaaggagaagtttctggtttaacagaggagttcagacatgcctca
cagaatggcacaaactggaaagcacacccttctgccaagagcccagtgaaagcagcgctc
cagtcatggatggctttgcagctcccatggcaacaagaaggaggtggactgaagatactg
tctgtcagcctggctctgctcgcagttcttgtcgtgttttactatggaggaatgaaaaca
gaactgtga
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