Columba livia (rock pigeon): 102090800
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Entry
102090800 CDS
T02912
Symbol
NOTCH1
Name
(RefSeq) LOW QUALITY PROTEIN: neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102090800 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_5
Ank_3
Ank_4
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
102090800
NCBI-ProteinID:
XP_013226044
LinkDB
All DBs
Position
Unknown
AA seq
2541 aa
AA seq
DB search
LSLKDLLWGFSLSVLLLEEKAEPTFKPTLSLFLGLRCTQLAESCLNGGKCETFLNGTEVC
QCSGAYVGERCQLPNPCLSSPCKNAGTCTPVVRGSTVDYTCACRLGFTDELCLTPRDNVC
ISNPCRNGGTCDLLTLSEYKCRCPPGWSGKTCQQADPCASNPCANGGHCVPFEAHYICRC
TAGFHGANCKQDVNECNISPPVCKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSP
CQNGGTCRQIGDTTYDCTCLPGFTGQNCEENINDCPGNNCKNGGTCVDGVNTYNCQCPPE
WTGQYCTEDVDESRPAPPCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFHGATCHDR
VASFYCECPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDV
DECSLGANPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGE
FQCICMPGYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECA
STPCKNGAKCVDGPNTYSCECTEGFMGAHCEIDIDECDPDPCHYGTCKDGIASFTCLCQP
GYTGHRCDININECQSQPCKNGGTCQDRNNAYNCLCLKGTTGPNCEINLDDCASNPCDYG
KCIDKINGYECTCEPGYTGRMCNINIDECSSNPCHNGGTCKDGINGFTCICPEGFHDPKC
LSEVNECNSNPCIHGKCHDGLNGYRCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTS
GYICTCREGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPC
AGGPCKNGGECRESEDYESFSCSCPSGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRC
ACRTGFTGRNCDTDIDDCKPNPCHNGGSCSDGVGTFFCECLAGFRGPKCEEDINECASNP
CKNGANCTDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPPGF
TGSYCEHDINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGK
CWQTNNLYRCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRC
QAGYTGSYCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQ
NGGTCIDLINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCTDRVGGYSC
ICPPGFVGERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKG
KPCRNGGTCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCM
CAPAFTGPECQYPASSPCTPNPCYNRGTCEFFGDASPYYRCNCPANFNGLNCHILDFDFQ
GGIGQDIIPPKIEEKCEIAVCAGYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQS
LQCWKYFNDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFE
CEWDGLDCANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNAKGE
YMIFPYYGNEEELKKHYIKRSTEDWSDMSSAVINKVKSSLYSRAGRRQKRELDQMDIRGS
IVYLEIDNRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPAKNSQL
YPMYVVVAALVLLAFIGVGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGL
KPLKNASDGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADL
RISSMAPTPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDF
IYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA
QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALH
WAAAVNNVEAAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHM
DRLPRDIAQERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPNSYIGNLKPAVQ
GKKARKPSTKGLSCNGKDAKDLKARRKKSQDGKGCLLDNSSVLSPVDSLESPHGYLSDVA
SPPLMTSPFQQSPSMPLNHLPGMPDAHMSINHLNMAGKQDMAMGNSSRMTFDSVPPRLSH
LPVSSPSTAMSNAPMNFSVGGAAALNGQCEWLSRLQNGIVQNQYNPLRGNMQPGAHQQTQ
NLQHGMMTTLHNSLPTTSLSQMMSYQAMPNTRLASQPHLMQGQQLQQMQQQQLQQPNQQQ
QQPPPQHHNPSSNTSGHIGQNFLGTELSQPDMQPVSGXLKTILPQDSQMLPTSLPSSLAQ
PMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPSPESPDQWSSSSPHSNVSDWSE
GISSPPTSMQSQLGHIPEAFK
NT seq
7626 nt
NT seq
+upstream
nt +downstream
nt
ttgtcactcaaggacctgctctggggtttctctctgtcagtcctcctgctggaggagaag
gcagagcctactttcaagcccaccctgagtttatttttaggtttacggtgcacacagctt
gctgaatcctgcctcaacgggggcaagtgtgaaacttttctcaacgggacagaggtgtgc
cagtgtagcggtgcctacgtgggtgagcggtgccagctgcccaatccctgcctgagctcc
ccctgcaagaacgccggcacctgcaccccggtcgtgcgcggcagcaccgtggactacacg
tgcgcctgccgcctgggcttcaccgacgagctctgcctgacgccccgtgacaacgtctgc
atcagcaacccctgccgcaacgggggcacctgcgacctgctgacgctcagcgagtacaag
tgccgctgcccgccggggtggtcaggcaaaacctgccagcaggccgacccctgcgcctcc
aacccctgcgccaatgggggccactgcgtccccttcgaagcccactacatctgccgctgc
accgccggcttccatggggccaactgcaagcaggacgtgaacgaatgcaacatctcgcca
cctgtctgcaagaatggtgggagctgcaccaacgaggtgggaacataccagtgctcctgc
aagccggcgtacaccgggcagaactgcgagcacctctacgtgccctgcaacccgtcgccc
tgccagaacggggggacatgccgccagatcggagacaccacctacgactgcacgtgcctg
ccagggttcacaggccagaactgtgaggagaacatcaatgactgtccgggcaacaactgc
aagaatggaggcacctgcgtggatggtgtcaacacctacaactgccagtgcccacccgag
tggacaggtcagtactgcaccgaggacgtggatgagtcccgccccgcccccccctgccac
aacaaccacggtggctacaactgtgtctgtgtcaatggctggacgggcgaggactgcagc
gagaacatcgatgactgtgccatggccgcctgcttccacggggccacctgccatgatcgg
gtggcttctttctactgcgagtgcccccacgggcgcacaggtttgctgtgccacctcgat
gacgcctgcatcagcaacccctgcaatgagggctccaactgcgacaccaaccccgtcaac
ggcaaagccatctgcacatgtccctcggggtacatggggccagcctgcaaccaggacgtg
gacgagtgttcgctgggagccaacccttgtgagcacgcagggaaatgcatcaacacccag
ggctccttccagtgccagtgcctgcagggctactcgggccctcgctgtgaaattgatgtc
aacgagtgtctctccaacccctgccagaacgatgccacctgcctggaccagattggggag
ttccagtgcatctgcatgcccggttacgagggggtttactgcgagatcaacacagatgag
tgcgccagcagcccctgcctgcacaacggcaactgcctcgacaagatcaatgagttccac
tgcgagtgccccactggcttcaacgggcacctgtgccagttcgacatcgacgagtgtgcc
agcaccccctgcaagaacggtgccaagtgcgtggacgggcccaacacctacagctgcgag
tgcaccgaaggtttcatgggcgctcactgtgagatcgacatcgatgagtgtgaccctgac
ccatgccactacgggacctgcaaggacggcatcgcctctttcacctgcctctgccagccc
ggctacacaggccaccgctgcgacatcaacatcaacgagtgccagagccagccctgcaaa
aatggggggacctgccaggacaggaacaacgcctacaactgcctctgcctcaaagggacc
acggggcccaactgcgagatcaacctggacgactgcgccagcaacccctgtgactacggc
aagtgcatcgacaagatcaacggctacgagtgcacctgcgagccagggtacacagggcgc
atgtgcaacatcaacatcgacgagtgctccagcaacccctgccacaacgggggcacctgc
aaggatggcatcaatggcttcacctgcatctgccctgagggcttccatgaccccaagtgt
ctgtctgaagtgaacgagtgtaacagcaacccctgcatccatgggaaatgccatgacggg
ctgaacggctacaggtgtgactgcgacccaggctggagtgggacaaactgtgacattaac
aataacgagtgtgaatccaacccctgcatgaacggtggcacctgcaaggacatgaccagc
ggctatatctgcacctgcagggagggcttcagtggacccaactgccagaccaatatcaac
gaatgcgcttccaacccctgcctgaaccaaggcacgtgcatcgatgacgttgccggctac
acctgcaactgcctcctgccctacacaggagccacctgtgaggacgtactggccccctgc
gctggtggcccctgcaagaatggtggcgagtgccgggagtcggaagactacgagagcttc
tcctgcagttgcccctccggctggcaaggtcagacgtgtgagatcgacatcaacgagtgt
gtgaaaagcccctgccgcaacggggccacctgccagaacaccaacgggagctaccgctgc
gcctgcaggaccggcttcaccggccgcaactgcgacaccgacattgacgactgcaagccc
aatccatgccacaacggtggctcctgctctgacggcgtcggcacgttcttctgcgagtgc
ctggctggtttccgtgggccgaagtgtgaggaggacatcaacgagtgcgccagcaacccc
tgcaagaacggtgccaactgcaccgactgcgtcaacagctacacctgcacctgcccctct
ggctttagcggcatccactgtgagaacaacacacctgactgcacagagagctcctgcttc
aacggtgggacctgtgtggatggcatcaacaccttcacctgcctctgtcctcccggcttc
actggcagttactgcgagcacgacattaacgagtgcgactccaagccgtgcctgaacggg
ggcacgtgtcaggacagctatgggacgtacaagtgcacttgtccccagggatacacaggg
ctcaactgccagaacctggtgcgttggtgcgactcctctccctgcaaaaacggaggcaag
tgctggcagactaacaacctgtaccgctgcgagtgcaacagcgggtggacagggctctac
tgcgatgtccccagtgtctcctgcgaggtggctgccaagcagcaaggtatcgacgtagcg
catctctgcagaaattcggggctctgtgtggacactggcaacactcacttctgccgctgc
caggccggctacaccggcagctactgtgaggagcaggtggacgagtgttcccccaacccc
tgtcagaacggagccacctgcacggactacctgggaggctactcctgcgagtgtgtggct
ggatatcatggagttaactgctcagaggagatcaatgagtgcttgtcccacccatgccag
aacggaggaacctgcattgatctcatcaatacctacaaatgctcctgccccagaggaact
caaggggtgcactgtgagatcaatgtggatgactgcagccctttctttgatcccgtcacc
ctggggcccaagtgctttaacaatggcaagtgcacggatcgggtgggcggctacagctgc
atctgcccccctggctttgtaggggagcgctgcgagggagacgtcaacgagtgcctgtcc
aacccctgcgatgcccgcggcacccagaactgcgtgcagcgggtcaacgactacaaatgc
gagtgccgacctggctacgcgggccgacgctgtgacaccgtggtggacggctgtaaaggc
aaaccctgccggaacggtgggacgtgcgcagttgccagcaacactggccgtggcttcatc
tgcaagtgccccccgggctttgtgggtgccacctgcgagaatgactcccgcacctgcggg
aacctgcactgtctgaacggcggcacctgcatctccatccacaagagctccaagtgcatg
tgtgctccggccttcacgggtcccgagtgccagtacccagccagcagcccctgcaccccc
aacccgtgctacaacaggggcacctgcgagttcttcggcgacgcctccccctactaccgc
tgcaactgccccgccaacttcaacggcctcaactgccacatcctcgactttgatttccaa
ggtgggattgggcaggacatcatcccacccaaaatcgaggagaagtgcgagattgccgtc
tgcgcggggtacgccggcaacaagatctgcgacgggaaatgcaacaaccacgcgtgcggc
tgggacgggggcgactgctccctcaacttcaacgacccctggaagaactgctcccagtcc
ctgcagtgctggaaatacttcaacgatggcaagtgcgactcacagtgcaacaatgccggc
tgcctgtacgatgggtttgactgccagaaatacgaagggcagtgcaaccctctgtatgac
cagtattgcaaagatcacttctctgacggtcactgtgaccagggctgcaataattttgag
tgcgaatgggatggtctggactgtgcgaacaacatgccggagaagctggcggatggcacg
ctggtggtggtggtcctcatcacccccgagaacctcaagaacaactccttcaatttcctg
cgggagctgagccgtgtgctgcacaccaatgtggtcttcaagaagaatgccaagggagag
tatatgatctttccgtactatggcaatgaggaggagctgaaaaagcattacatcaagagg
tcgacagaggactggtcagatatgtctagtgctgtcatcaacaaagtgaagagcagcctc
tactccagggctggcaggaggcagaagagagagctggatcagatggacatcagaggatcc
atcgtgtacttggaaatcgataaccgccagtgcatccagtcgtcttcccagtgcttccag
agcgcaaccgatgtggcggcgttcctgggcgccttggcctcccttggcaacctgaacata
ccctacaaaatagaagccgttaaaagtgaaacggctgagcccgcgaagaactcgcagctg
tatcctatgtacgtggtggtggccgcgctggtcttgctcgcgttcatcggagtgggggtg
ctggtgtctcgtaagcggcgcagggagcatgggcagctttggttcccagaaggcttcaaa
gtgacggagtcgagcaagaagaagcgacgagaaccactcggggaggattctgtgggactg
aaacctctcaaaaatgcctcagacggcacgctgatggacgacaaccaaaatgagtggggc
gatgaggagaccttggacaccaagaagttcaggttcgaggagcaggcgatgctgcccgac
acggacgaccagacggaccacaggcagtggacccagcagcacctggacgccgctgacctg
cgcatctcgtccatggcgcccactccgccgcagggggaaatcgatgccgactgtatggat
gtcaatgtcagaggtcctgatggcttcaccccgctcatgatcgcctcgtgcagcggagga
gggctggagaccggcaatagcgaagaggaagacgatgctcccgccgtcatctcggacttc
atctaccaaggtgccagcttacacaaccagacggaccgcaccggcgagacggccctgcac
ctggccgcccgctactcccgctcggacgctgccaagcgcctgctggaagccagtgctgat
gccaacatccaggataacatgggcaggacacccctccacgccgctgtctctgccgatgcc
caaggcgtcttccagatcctgattaggaacagggcaaccgacctcgacgcccgaatgcac
gacgggaccactcctctgatcctggccgctcgcttggctgtggaggggatgctggacgat
ctcatcaactgccacgcagacgttaacgccgtggatgatctaggcaagtcagcgctgcac
tgggcagctgctgtgaataacgttgaagctgcagttgtcctcctgaagaatggtgccaat
aaggatatgcagaacaataaggaggagaccccactgttcctcgcagccagagaagggagc
tatgaaaccgccaaggtcctgctggaccattttgccaaccgcgacatcacggaccacatg
gaccgtctcccgcgggacatcgcccaggaacgcatgcaccacgacatcgtgaggctgctg
gacgagtacaacctggtgcggagcccacccctgcacaacggcccactgggggcccccacg
ctgtcccctccgctctgctcgcccaacagctacatcggcaacctgaaacctgctgtccag
ggcaagaaggccaggaagccaagcaccaagggcctgagctgcaacggcaaggatgccaaa
gacctcaaagcccggaggaaaaagtcacaagatggaaaaggatgtctgcttgacaactcc
agcgtgttgtctccagtggactcgctggaatcgccccatgggtacctgtcggatgttgcc
tcccctccgctgatgacctctccgttccagcagtccccttccatgcctctgaaccacctg
ccaggcatgcctgatgcccacatgagcatcaaccacctcaacatggcagggaagcaggac
atggccatgggaaactccagcaggatgactttcgattcggtgccgccgcgtctctctcac
ctgcccgtctccagccccagcacggcgatgagcaacgccccgatgaatttctcagtgggc
ggcgcggccgctctgaacgggcagtgcgagtggctcagcaggctgcagaacggcatcgtc
cagaaccagtacaaccccctgaggggcaacatgcaacctggggcacaccagcagacgcaa
aaccttcaacacggcatgatgaccaccctgcacaacagcttgcccaccacaagcttgtcg
cagatgatgagctaccaggcgatgccaaacacccgcctggcttctcagcctcacctgatg
cagggccagcagctccagcagatgcagcagcagcagctccagcagccaaaccagcagcag
cagcagccgccgccgcagcatcacaaccccagctccaacaccagcggccacatcggccaa
aatttcctcgggacggagctgagccagcccgacatgcagccggtgagcggcnagctaaaa
accatcctgccacaagattcccagatgctgcccacgtctctgccgtcctccctcgcccag
cccatgaccaccacccagttcctaactccaccttcccagcacagttattcctcccccttg
gacaacacccccagccaccagctccaggtgcccgaccaccctttcctcacaccgtctccg
gagtcgccggaccagtggtccagctcgtcccctcactccaacgtgtccgactggtccgag
ggcatctccagcccccccaccagtatgcagtcacagctgggacacatccccgaagccttc
aagtaa
DBGET
integrated database retrieval system
