Columba livia (rock pigeon): 102097594
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Entry
102097594 CDS
T02912
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04510
Focal adhesion
clv04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102097594
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102097594
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
FUSC-like
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
102097594
NCBI-ProteinID:
XP_021150278
LinkDB
All DBs
Position
Unknown
AA seq
1699 aa
AA seq
DB search
CHSPAQDSEKCFTCDSRDPSLPESHRIENVIYLSGPHGQRTWWQSENGVEHVSIRLDLEG
EFHFTHLIMKFKTFRPAAMLVERSADFGHSWKVYRYFAYNCSKLFPGVPSQPSGLVDEVL
CDQRYSEIEPSSHGEVIFKVLDPSIPVADPYSPDIQDLLRVTNLRVNLTKLHTLGDNLLD
TRQEVLHKYYYAVDELVLRGSCFCHGHAAHCAPAPGAPTSSIPSMIHGRCVCEHNTQGLN
CERCQDFYHDLPWRPAEGSSTNACRRCDCNEHSQRCHFDMAVYLATGNTSGSVCDGCQHK
TMGRRCHLCKPFYYRHPRSDIRSPTACAPCDCDPAGSLDGGACDGHTDVALGMIAGQCRC
KENVAGPRCDRCRHGAYGLSHGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFVAGR
SCSQCVPEFWGLSYDVGGCRPCACDFGGAYSNRCSMEDGACPCRPHLMGRQCDQVQPGFF
CAPLDYYTYEAEQATSHGHGHPQLPPDVEEVVRDGTGHMVTWTGSGFARVRDGAGLTFRV
DNVPYPMDYELLLRYEPESAEDWEAVVSVSSQVLPTSPRCGNLLPSEQMYRESLPHSQRY
VVLSRPFCFEPSTPYEVTVRLQRAGVTQRHPSAFILIDSLVLLPRVLELPGFHGAEGAAR
REELERYRCLEAFRMAPPSPLAQACARLVCSVSALLHGGALCEWDPQGSRSSECQVQGGQ
CQCKPHVIGRRCDHCAPGSYGFGPLGCSSCACSPEGSVSQLCDAVSGQCRCQPGAVGRQC
DQCQPGHWGFPACRPCQCNGHSEECDPRTGSCLHCRDHTTGRHCERCQDGYYGDPVLGSG
QQCRPCPCPGYPGTRHYHGSACHADEETHHIVCLCAPGYTGPRCDRCSPGYFGVPEMEGG
ACRPCQCNNNIDASDPGACDPHTGHCLRCLYHTAGPRCAHCQPGYYGNALQRGCRREWGA
APGQGMCDCDRSTGTCACRPNVLGKSCDRCAPHFWSLGGLGGCEPCGCHPTRALHPSCDA
VTGQCQCRPGFGGRVCSQCQEHHWGDPERECRACECEPLGAESLQCEPASGQCQCRPGFG
GLRCDRCQRGYQEPFPHCSPCHPCFGRWDLALGSLRDGLRRLGAQARALREGGAAPQLSP
HRLRELEEALGRVEQLLVQGVSPGGPLLNELPRQLDSTRMELDDFWKQLQELEQHLDQLS
QADVRHRDRLAGLTRDLGALNRTTSHLQILLGTVAAAGFDESYSSILASAENSRQAEAVA
NGTVSQLNRAQATRQATEKMLRQRGDAFRRGTAAARKSLREAQKRVMGLSVTGINEKICG
VPGDQSCKEAPCGGALCQDGVGTRRCGGTGCAGALPISVRALSSSRNASLQLEVALGQLG
VVAQKTQEVQELAQGARSRAEEVLGRPPPXSRSEKATAQLRDFIRRIKAFLAEEGADPGS
IELVARQVLNISLPSSPQRIQELLQEMQESISQLEGVDAVLNSTKQGLAMARGLLVQGQN
ARERAEGVRDELAGTQRALEPAXTAAGSALRSARDAIQVTKSRAKEAERRLQALEGKEXX
XXXXXXXXXXXALRERGRDTRRMAQQAKDGAQRATAASGTLSQDLAQVTQRYVVLKGRVS
GLAGVSSGALQRVTQLTAEAQDLLDKASSSKRKLEELEQHFGANERAMAAKATRLQSLEQ
RVWGLLEEIRERANAYATC
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
tgccactccccggcacaggactcggagaaatgcttcacctgcgactcgcgggatccatcc
ctgcctgaaagccaccgcatcgagaatgtcatctacctgagcggcccccacggccagcgg
acctggtggcagtcagagaacggcgtggagcacgtcagcatccgcctggacctggagggc
gagttccacttcacccacctcatcatgaagttcaagaccttccgccctgccgccatgctg
gtggagcgctcagccgatttcggacacagctggaaggtctatcgctacttcgcctacaac
tgctccaagctcttccccggtgtccctagccagccctcgggcttggtggacgaggtgctg
tgtgaccagcgctactctgagatcgagccctccagccacggggaggtcatcttcaaggtg
ctggatccctccatccctgtggcagatccgtacagcccagacatccaggacctgctgcgt
gtcaccaacctgcgggtgaacctcaccaagctgcacacgctgggggacaacctgctggac
acacggcaggaggtgctgcacaagtactactacgctgtggatgagctggtgctgcgtggg
agctgcttctgccatggccatgctgcccactgcgccccggcacccggcgccccaacctcc
tccatccccagcatgatccatgggcgctgcgtctgcgagcacaacacacaggggctgaac
tgcgagcgctgccaggacttctaccacgacctgccctggcgcccggccgagggctccagc
accaacgcctgccgccgctgtgactgcaatgaacactcacagcggtgccacttcgacatg
gccgtctacctggccacgggcaacaccagtgggtctgtgtgcgatggctgccagcacaaa
accatgggccgccgctgccacctctgcaagcccttctactaccggcacccccgctctgac
atccgctcccccaccgcctgtgccccatgtgactgtgacccagcgggctcgctggatgga
ggtgcctgcgatgggcacacggacgtggcgctgggcatgatcgcggggcagtgccgctgc
aaggagaacgtggccggtccccgctgtgaccggtgccggcacggtgcctatggcctcagc
cacggcgacccacagggctgccagccatgcagatgtgacccgcggggcacggtggccggc
agctccccctgcgaccccatcagtggggactgctactgcaagcgcttcgtggccgggcgc
tcctgcagccagtgcgtgcctgagttctggggcctgagctacgatgtggggggctgccgg
ccctgcgcctgtgacttcgggggagcctacagcaaccggtgctccatggaggatggggct
tgtccctgccgtcctcacctgatggggcggcagtgtgaccaagtacagcccggcttcttc
tgcgccccccttgactactacacctacgaggccgagcaggccaccagccatggccacggt
caccctcagctcccaccggacgtggaggaggtggtgcgggatggcaccgggcacatggtg
acatggacaggctcggggtttgcccgggtacgtgatggggctggcctgaccttccgtgtg
gacaacgtgccgtaccccatggactacgagctgctgctgcgctatgagcctgagtcagcc
gaggactgggaggccgtggtcagcgtcagctcccaggtgctgcccaccagccctcgctgt
gggaacctgctgccctctgagcagatgtaccgggagagcctgccccacagccagaggtac
gtggtgctgtcccggcccttctgctttgagccaagcaccccctatgaggtgaccgtgagg
cttcaacgggctggtgtcacccagcgccaccccagtgccttcatcctcatagactcgctg
gtgctcctgccacgggtgttggagctaccaggcttccacggggcagagggagcagctcgc
cgggaggagctggagcggtaccggtgcctggaggcatttcgcatggcccccccgtccccc
ctggcccaggcctgtgcccgcctggtctgcagtgtctcggcactgctgcacggcggggca
ctgtgtgagtgggaccctcagggctcccgcagcagcgagtgccaggtgcagggagggcag
tgccagtgcaagccccatgtcatcggccgccgctgcgaccactgtgcccccggcagctac
ggctttgggcccctgggctgcagctcctgtgcctgctccccggagggctcggtgtcccag
ctgtgtgacgcggtgagcgggcagtgccggtgccagcctggtgccgtgggccggcagtgt
gaccagtgccagcccggccactggggcttccctgcctgccggccctgccagtgcaatggg
cacagtgaggagtgtgacccccggacgggcagctgcctgcactgccgcgaccacaccact
ggccggcactgcgagaggtgccaggacggttactatggggacccagtgctgggctcgggg
cagcagtgccggccctgcccctgtcccggctaccccggcacacggcactaccatggcagc
gcctgccatgctgacgaggagacccaccacattgtctgcctctgtgcgcctggatacact
ggaccccgctgtgaccgctgctcccctggctacttcggggtgccggagatggagggggga
gcatgccgtccctgccagtgcaacaacaatattgatgccagtgatccaggggcctgtgac
ccccacacggggcactgcctgcgctgcctgtaccacactgctgggccccgctgtgcccac
tgccagcctggctactatggcaatgccctgcagcgtggctgccggcgtgagtggggggct
gcaccagggcagggaatgtgtgactgcgaccgcagcaccgggacctgcgcctgccggccc
aacgtgctgggcaagagctgcgaccgctgcgcaccccacttctggagcctgggggggctg
gggggctgtgagccctgtggttgccaccccacacgcgccctgcacccctcctgtgatgcg
gtgacggggcagtgccagtgccggcccggctttgggggccgcgtctgctcccagtgccag
gagcatcactggggagaccccgagcgggagtgcagagcatgtgagtgtgagccactgggc
gcggagagcctgcagtgcgagccagccagcgggcagtgccagtgccggccgggctttggg
gggctgcgctgtgaccgctgccagcggggctaccaggagccctttccccactgctcgccc
tgccacccctgctttgggcgctgggacctggccctgggcagcctgcgggacgggctgcgg
cgcctgggggcacaggcacgggcgctacgggaggggggagctgcaccccagctcagcccc
caccgcctgcgggagctggaggaggccctggggcgcgtggagcagctgctggtgcagggg
gtcagccctggtggccccctcctcaacgagctgccccggcagctggacagcaccaggatg
gagctggatgacttctggaagcagctccaagagctggaacaacatctggatcagctgtca
caggcagatgtgcggcaccgcgaccggctagccgggctgacccgtgatctgggggctctc
aatcgaaccacctcccacctccaaatcctcctcggcactgtggcagcagctggatttgat
gagtcgtacagcagcatcctggcgtcggcagagaactcgcggcaggcagaggcggtggcc
aatggcacggtcagccagctgaacagggcacaggccacacggcaggctactgagaagatg
ctgcggcaacggggtgatgctttccgccgtggcacagctgcagcacggaaatccttgcgg
gaggcacagaaacgggtgatgggactcagtgtcactgggatcaatgagaagatttgtggg
gtgcctggagaccagagctgcaaggaagcgccttgtggaggagccttgtgccaggacggt
gtggggacacggcgctgtggtggcacagggtgtgccggggcactgcccatctcggttcga
gccctgagcagctcccgtaacgcctcactgcagctggaggtggccttggggcagctgggg
gttgtggcgcagaagacacaggaggtgcaggagctggcgcagggggcgcggagccgggca
gaggaggtgctggggcggcccccccccnncagccgctcggagaaggcgacggctcagctg
cgggacttcatccgccgaatcaaggctttcctggcagaggagggagctgacccgggcagc
atcgagctggtggctcggcaggtgctgaatatctccctgcccagcagtccccagcggatc
caggagctgctgcaggagatgcaggagagcatcagccagctggagggggtggacgcggtg
ctcaacagcaccaagcaggggctggccatggcgcgggggctgctggtgcagggacagaac
gccagggagcgagcggagggcgtgagggatgagctggcggggacacagcgagcgctggag
ccggcgntgacggcagcggggagtgccctgcggagtgccagggatgccatccaggtgacc
aaaagcagagccaaggaggcagagcgcaggctgcaggcactggaagggaaggagnntnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctgctctgcgggagcggggccgggacact
cgccgcatggcccaacaagccaaggatggggcacagcgtgccactgccgcctcggggaca
ctcagccaggacctggcacaggtgacgcagcgctacgtggtgctgaagggtcgagtgagc
gggcttgctggggtgtccagcggggccctgcagcgtgtgacacagctgacagcagaggcc
caggaccttctggacaaggccagcagcagcaagaggaagctggaagagctggagcagcac
ttcggggccaacgagcgggcaatggcggcgaaggcgacgcgactgcagtccttggagcag
cgggtctgggggctgctggaggagatccgggagagggccaacgcttatgccacctgctag
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