Columba livia (rock pigeon): 102097768
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Entry
102097768 CDS
T02912
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04510
Focal adhesion
clv04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102097768
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
102097768
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
Laminin_II
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
102097768
NCBI-ProteinID:
XP_021150279
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
RLSATSTCGLRRPQPYCIVSHLQEEKKCFVCDSRRPYDARANTNSHRIENVVTTFAPRPK
KAWWQSENGVEHVSIQLDLEAEFHFTHLIMTFKTFRPAAMLVERSADFGRSWKVYRYFAY
DCATSFPHIPRGPLRRIDDVICESRYSDIEPSTEGEVIYRVLDPAIPIRDPYSPAIQNLL
RVTNLRVNLTKLHTLGDNLLDTRQEIREKYYYALYELVLRGNCFCYGHASECAPLSGSPV
TTDGMVHGRCVCKHHTQGLNCERCQDFYHDLPWRPAEGSSTNACRRCDCNEHSQRCHFDM
AVYLATGNTSGSVCDGCQHNTMGRRCHLCKPFYYKDPSKDLRDPAVCRGXXCDPEGSLDG
GLCDSADDPARGLIAGQCRCKEHVAGPRCDRCKPGFFGLSAANPQGCQRCRCDPRGTVAE
GSRCDPVSGDCFCKRLVAGHSCDQCLPEHWGLSHXXXXXXDCDVGGARDNLCAMETGQCR
CRSHVVGRQCGQVEPGFYHINLDHYTYEAEDARLHKGSVVEREPPTDHPASWTGTGFARM
LEGGYVEFHVSDVPFSTEYNVIIRYEPQHPEPWQEVRVRVLRPSPVSASSPCGNTIPADD
QLSASLPSGARYVVLPQPICLERGVSYTLRLELGCATTQQDPSASVLIDSLVLLPRYSSL
EMFIAGDPSSMERRETFERYRCAQPFHTAGPSPVAEPCARLLHSLSAILHDGALPCLCDP
QGSLSAECRPQGGQCRCKPNVMGRRCHRCSPGTFGFGPGGCRACQCSREGSVSTLCDAVS
GQCRCQPGAVGRQCDRCQPGHWGFPACRPCQCNGHAEDCDPRTGSCMRCRDHTDGERCQR
CAAGHFGNPALGSGQHCRPCPCPEGPGSPRHFAASCYQDPRSRQGVCHCSPGYTGPRCDE
CAPGYYGDPLQPDGRCLPCQCHDNIDATDPEACDRRTGRCLRCLYNTAGPHCAECQPGYY
GDATRHSCRRCSCNTLGTDPSTCGPQQCQCDGRSGQCHCLPHVEGQNCDRCSPNFWNLGS
GQGCQPCACHPQHALTPACNQFTGQCSCRPGFGGRTCGDCQEHHWGDPQRQCRACDCDPR
GVANTQCHRSSGHCECRPGISGIRCDQCARGFAGAFPACQPCHPCFGDWDRVVQDLAART
RALAQRASLLQHTGAAGVFEGTFRRLEESLATVRDVVAARNTTATTAAHLTHATEGLRRQ
IEDATERLTRLEGELTATQDANFNASHVLSAVDRGARALNHSLQDLEHRLHTLKTSNFLG
AYDSIRQSHEESREAERQADASTRAVPSPISTSVATRHRTEQLLXPXXXXXXXXXAASRR
ALMDLAARAQALSLHPLNEKVCGAAGDVPCAESPCGGAGCRDEDGGRRCGGLSCGGGAGC
VPQPSGLMLRISAPAQVAEAKGKADEARRQAQAALDKANQTRARVESSNKELRELISQVK
AFLSQEGADPESXXXXXXXXXXXXXXXXXXXXXXEIKARVHSLASVDAILEQTAGDVRQA
GQLLQDAQRARSRAEGVRGTAEAVRQALEEARRAQSMAEQALQHAAGDIQHSERALGTMQ
AQTASAEQQLADAMGQIGLLDGQTDALKVKRANNSLAATRAQEAASTARDRAGEAKQVLE
GPLRDRYRTAQELVEHRAQGAQQAGSRAQRLKRWDSWDEVGILTKHCVGLPVNATVKVM
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
cgcctgagtgccacctccacctgcgggctgcgccggccacagccctactgcatcgtcagc
cacctccaggaggagaagaagtgcttcgtctgtgactcacggcgaccctacgatgcccgt
gccaacaccaacagccaccgcatcgagaatgttgtcaccacctttgccccccgccccaag
aaagcctggtggcagtcggagaatggcgtggagcatgtcagcatccagctggacctggag
gccgagttccatttcacccacctcatcatgaccttcaagaccttccgccccgcggctatg
ctggtggagcgttcggctgattttggacgcagctggaaggtctaccgctatttcgcctat
gactgtgccacctccttccctcacatcccccgtgggccactgcgccgcattgatgatgtt
atctgcgagtcccgctactctgacatcgagccctccaccgagggggaggtgatctaccgg
gtgctggaccctgccatccccatccgggacccctacagccctgctatccagaacctgctg
cgtgtcaccaacctgcgagtgaatctcaccaagctgcacacactgggggacaacctgctg
gacacacggcaggagatccgggagaagtactactacgcgctctatgagctggtgctgcgt
gggaactgcttctgctacgggcacgcctctgagtgtgccccgctcagcgggagccccgtc
accaccgacggcatggtgcatgggcgctgtgtctgcaagcaccacacgcaggggctgaac
tgcgagcgctgccaggacttttaccacgacctgccctggcgcccggctgagggctccagc
accaacgcctgccgccgctgtgactgcaatgaacactcacagcggtgccacttcgacatg
gccgtctacctggccacgggcaacaccagcgggtccgtgtgtgatggctgccagcacaac
accatgggccgccgctgccacctctgcaagcccttctactacaaggaccccagcaaggac
ctgcgggaccctgccgtgtgccgaggnnnnnactgtgaccccgagggctctctggacgga
gggctgtgtgacagtgctgacgacccagcccgggggctgattgcggggcagtgtcgctgc
aaggagcatgtggctggtccccgctgcgaccgctgcaaacccggcttctttggcctcagc
gccgccaacccgcagggctgccagcggtgccggtgtgacccccgtggcacggtggctgag
ggcagccggtgcgaccctgtcagcggtgactgcttctgcaagcggctggtggctgggcac
agctgtgaccagtgcctgcctgagcactgggggctgagccatnngannnnnnnnnnnngt
gactgcgatgtgggaggtgcccgtgacaacctgtgtgccatggagacgggacagtgccgg
tgccgcagccacgtggtgggacggcagtgcggccaggtggagcctggcttctaccacatt
aacctggaccactacacctatgaggctgaggatgctcggctgcataagggctcagtggtg
gagcgtgagccccccacggaccacccggcttcatggacggggacgggctttgcccgcatg
ctggagggtggctatgtggagtttcatgtgagtgatgtgcctttctccactgaatacaac
gtgatcatccgctacgagccccagcatccagagccctggcaggaggtgagggtgagggtg
ctacgccccagccctgtctcagccagcagtccttgtggaaacaccattccagctgacgac
cagctctccgccagcctcccctcgggtgccaggtacgtggtgctgccccagcccatctgc
ctggagcggggcgtctcctacaccctccgcctggagctgggctgtgccaccactcagcag
gacccctccgccagcgtgctcatcgattcgttggtgctcctgccccgttactcctcgctg
gagatgttcatcgcgggcgaccccagctccatggagcgccgggagacctttgagcggtac
cgctgtgcccagcccttccacactgcggggccctcgcctgtggctgagccctgcgccagg
ctcctgcacagcctctcagccatcctgcacgatggggcactgccctgcctgtgcgacccc
cagggctcgctgagcgccgagtgccggccccagggcgggcagtgccgctgcaaacccaat
gtcatgggacggcgctgccaccgctgctccccaggaacttttggctttgggcctggcggg
tgccgagcgtgccagtgcagcagggaggggtcggtgagcaccctgtgtgatgcggtgagc
gggcagtgccggtgccagcctggtgccgtgggccggcagtgtgaccgctgccagcccggc
cactggggcttccctgcgtgccggccctgccagtgcaacgggcatgctgaggactgcgac
ccccggacgggcagctgcatgcgctgccgtgaccacacggacggcgagaggtgccagagg
tgcgcagccgggcactttgggaacccagcgctgggctctgggcagcactgccggccctgc
ccctgccctgaggggcctggcagcccccgccacttcgccgcctcctgctaccaggacccc
cgctcacggcagggcgtctgccactgcagccctggctacacaggtccccgctgtgatgag
tgtgcccctgggtactatggggacccactgcagcccgacgggcgttgtctgccctgccag
tgccacgacaacatcgatgcaacggacccagaggcgtgcgaccggcgcacagggcgctgc
ctgcgctgtctctacaacacggcggggccacactgtgccgagtgccagccaggctactat
ggggatgccacgcggcacagctgcaggcgttgctcttgcaacacgctgggcaccgacccc
agcacctgcgggccccagcagtgccagtgcgacgggcgcagcgggcagtgccactgcctg
ccccatgtggagggccagaactgcgaccgctgcagcccgaacttctggaacctgggcagc
gggcagggctgccagccctgcgcctgccacccacagcacgccctgacacccgcctgcaac
cagttcacgggccaatgctcgtgccggccaggctttgggggccggacgtgcggtgactgc
caggagcaccactggggcgatccacagcgacagtgccgagcctgcgactgtgacccacgt
ggcgttgccaacacccagtgccaccgcagcagcggacactgcgagtgccggcctggcata
tctggtatccgctgtgaccagtgtgcccgcggcttcgccggtgccttccccgcctgccag
ccctgccacccctgcttcggggactgggaccgggtggtgcaggacctggctgcccgcacc
cgcgcactggcacaacgggccagccttctgcagcacaccggggctgccggcgtctttgaa
ggcaccttccgtcggctagaggaaagcctggccaccgtgcgtgacgtggtggccgcccgc
aacaccactgccaccactgccgcccacctgacacacgccacagaggggctgcggcggcaa
attgaggatgcgacagagaggctgacgcggctggagggggagctgacagccacccaggat
gccaacttcaatgccagccatgtgctgagcgcggtggaccggggtgcccgtgccctcaac
cacagcctgcaggacctggagcaccggctgcacaccctcaagacctccaatttcctcggt
gcctacgacagcatccgccagtcccatgaggagtcacgggaggccgagcgccaggcggac
gcctccacccgtgccgtgcccagccccatcagcacctcggtggccacccggcaccgcacc
gagcagctgctgnngccagnnnnnnnnnnnnnnnnnnnnnnnnacgcggccagccggcgg
gccctgatggacctggcggcaagggcacaggcactgagcctgcacccgctcaatgagaag
gtctgtggtgcggcgggcgacgtgccctgcgctgagagcccctgcgggggagccgggtgc
cgggacgaggacgggggacggcgctgtgggggcctgagctgtggcgggggggccggctgt
gtcccccagccctcagggctgatgctgaggatctctgcccctgcccaggtggctgaagcc
aaggggaaggcggatgaggcccggcggcaggcgcaggcagccctggacaaggcgaaccag
accagggctcgggtggagagctccaacaaggagttgcgggagctcatcagccaagtcaaa
gccttcctgagccaggagggagccgaccccgagagcnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagatcaaggcacgggtg
cacagcctggccagcgtggacgccatcctggagcagacggctggtgatgtgcgccaggcc
gggcagctgctgcaggacgcccagcgggccaggtcgcgggcagagggggtgcgcggcacg
gccgaggcggtgcggcaggcactggaggaggcacggcgagctcagagcatggccgagcag
gcactgcagcatgctgccggtgacatacagcacagcgagagagccctcggcacgatgcag
gcgcagacggcgagcgcagagcagcagctggcagatgccatggggcagattgggctcctg
gatggacagacagatgccctgaaggtgaaacgtgccaacaacagcctggcagccacgcgc
gcccaggaggcagccagcaccgcgcgggaccgcgctggcgaggccaagcaggtgctggag
gggccactgcgggaccggtaccgcacggcgcaggagctggtggagcaccgggcacagggt
gcgcagcaggcaggcagccgggcacagcggcttaagcgttgggacagctgggatgaggtt
ggtatcctcaccaagcactgcgtggggcttcccgtaaatgccacagtgaaggtcatgtga
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