Caldivirga maquilingensis: Cmaq_1136
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Entry
Cmaq_1136 CDS
T00611
Name
(GenBank) DNA-directed RNA polymerase
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
cma
Caldivirga maquilingensis
Pathway
cma03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cma00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cmaq_1136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cma03021
]
Cmaq_1136
Enzymes [BR:
cma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cmaq_1136
Transcription machinery [BR:
cma03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Cmaq_1136
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
CvfB_2nd
RNA_pol_Rbc25
DUF5608
Motif
Other DBs
NCBI-ProteinID:
ABW01963
UniProt:
A8MDV7
LinkDB
All DBs
Position
complement(1192464..1193099)
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AA seq
211 aa
AA seq
DB search
MRPMMQGLNKPNPCRGVFRVITVEDYIRVPPSVFNEPIDKIAYEQLRSNYEGKVDRELGV
FIAVFDVKVDKRGVIVYGDGATYHKVSFKALVFVPLINEIVEGDVVDVKEYGAHVRIGAL
TAFIHRSQVMDENVVLFDRQSGVFMGEKNRQKKVGRGDVVRARIVGVSYVSTANGIRLNV
SMTMRQPFLGKIEWIEEATKAKKKPQSKPGQ
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctatgatgcaaggtttaaataagcctaatccatgtaggggtgtgtttagggta
ataacagtagaggattacattagggttcccccctcggtgtttaatgaacctattgataag
attgcctacgagcagttgagaagtaactatgagggtaaggttgatagggagttaggggtc
tttatagcggtattcgatgtgaaggttgataagaggggtgtcatagtttacggtgatggt
gcaacataccataaggtttcctttaaggcacttgtcttcgtcccactgattaatgagatt
gttgagggggatgtggttgatgttaaggagtatggcgcccacgtcagaataggtgcctta
acagccttcatacataggtcccaggtaatggatgagaacgttgtactcttcgataggcag
agcggcgtcttcatgggggagaagaataggcagaagaaggttggtagaggggatgtggtt
agggctaggatagttggggttagttacgtgtcgacggctaatggaattaggttaaacgta
tcaatgactatgaggcaacccttcttgggtaaaattgagtggattgaggaggccactaag
gccaagaagaagcctcagagtaagccggggcagtga
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