Colossoma macropomum (tambaqui): 118820077
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Entry
118820077 CDS
T09004
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
cmao
Colossoma macropomum (tambaqui)
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cmao03016
]
118820077 (cdkal1)
Enzymes [BR:
cmao01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
118820077 (cdkal1)
Transfer RNA biogenesis [BR:
cmao03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
118820077 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Glyco_hydro_120_ins
TraT
Motif
Other DBs
NCBI-GeneID:
118820077
NCBI-ProteinID:
XP_036444096
LinkDB
All DBs
Position
Unknown
AA seq
564 aa
AA seq
DB search
MLSACEPFVDDIEDMVASHDPTSFQREFSRQSVVPRVRRRKEQPPAEELQADSVIPGTQK
VWMRTWGCSHNSSDGEYMAGQLAASGYKMTDNPSDADVWLLNSCTVKNPAEDHFRNSIKK
AQEQNKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDN
GKRLGGARLDLPKIRKNPLIEIISVNTGCLNACTYCKTKHARGVLASYPIEELVERARQS
LQEGVCEIWLTSEDTGAYGRDIGTDLPSLLWELVKEIPEGCMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCCDDFKRVVDFLKNKVPGITIATDIICG
FPGETDKDFQETMELVRKYRFPSLFINQFYPRPGTPAAKMEQIPAQVKKQRTKELSALFH
SYNPYDHKVGERQHVLVTEESFDGQYYVAHNKFYEQVLVPKNAKFKGKMIEVDIYEAGKH
FMRGRPVEDARVITPSISQPLLKGEVSGIPQKLKESCQNGFHAPLASTALIGPSWRLDGE
GLKLLSVGLALLAIVVFFVFEKLH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgcttgtgagcccttcgttgatgacatcgaggacatggtggccagtcatgac
ccgacctcctttcagcgggagttctccaggcagagcgtcgttccccgggtgcggaggcga
aaggagcaacctcctgctgaggagctgcaagcggacagtgtgatcccaggcacacagaag
gtgtggatgaggacatggggctgctcgcacaacagctcagacggagagtacatggctggt
cagctggctgcaagcggctacaaaatgacagataatccatctgatgctgatgtgtggttg
ctgaacagctgtacagtgaagaatccagcagaagatcacttcagaaactccatcaagaag
gcacaggagcaaaataagaaagtagtggtagcaggttgtgttcctcaggctcagcccaga
atggactacctcaaaggcctgagcattattggggttcaacagatcgatcgagttgtggaa
gtggtggatgaagcagtcaaaggtcactccgtccgtctcctgggtcagaagaaagataat
ggcaagagactggggggagctcgattggatttgccgaagattaggaagaacccgctgata
gaaatcatttccgtcaatacaggctgtttgaatgcttgcacatactgcaaaaccaagcat
gccagaggggtcctcgccagctaccccattgaggaactagtggagagagccagacagtcc
ctccaggagggggtttgtgagatctggctgaccagtgaggacacaggtgcatatgggaga
gacattgggacagacctgccatctctgctgtgggagctggtgaaggagattccggagggc
tgcatgctgcggctgggcatgaccaacccaccgtacatccttgagcacctggaggaaatg
gctaagatcctcaaccatccacgagtctatgccttcctgcacgttcccgttcagtcagcg
tctgacagcgtcctgatggatatgaagagagaatactgctgcgacgacttcaagcgtgtg
gtggacttcttaaagaacaaggtaccaggcatcaccattgccactgacattatctgtggc
ttcccaggagagacagataaggacttccaggaaacgatggagctggtgagaaagtaccga
tttcccagcctcttcatcaaccagttctacccacgacctggtaccccagcagccaagatg
gagcagatcccagcacaagtgaaaaaacaaagaaccaaagagctgtctgcactgttccac
tcgtataacccttatgaccataaggttggtgaaaggcagcatgtgttggtcactgaggag
tcttttgatgggcagtactatgtcgctcacaacaaattctatgaacaggtcctggttccc
aaaaatgctaagttcaaagggaagatgattgaggtggacatctatgaggctgggaagcat
ttcatgcgtggacgtccagtggaggatgccagagtcatcacaccctccatctcccagcca
ctgctgaaaggagaagtgtccggcattcctcagaaattgaaagagtcatgtcagaatggc
ttccatgcccccttggcttccacagcgctgattggtccgtcatggagactggatggtgaa
ggactcaagctactttcagtgggtcttgctctgctggctattgtagtgttctttgttttt
gagaaacttcactaa
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