Colossoma macropomum (tambaqui): 118821638
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Entry
118821638 CDS
T09004
Symbol
nfkb1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04010
MAPK signaling pathway
cmao04210
Apoptosis
cmao04218
Cellular senescence
cmao04620
Toll-like receptor signaling pathway
cmao04621
NOD-like receptor signaling pathway
cmao04622
RIG-I-like receptor signaling pathway
cmao04623
Cytosolic DNA-sensing pathway
cmao04625
C-type lectin receptor signaling pathway
cmao04920
Adipocytokine signaling pathway
cmao05132
Salmonella infection
cmao05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118821638 (nfkb1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
118821638 (nfkb1)
04218 Cellular senescence
118821638 (nfkb1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118821638 (nfkb1)
04621 NOD-like receptor signaling pathway
118821638 (nfkb1)
04622 RIG-I-like receptor signaling pathway
118821638 (nfkb1)
04623 Cytosolic DNA-sensing pathway
118821638 (nfkb1)
04625 C-type lectin receptor signaling pathway
118821638 (nfkb1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
118821638 (nfkb1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118821638 (nfkb1)
09171 Infectious disease: bacterial
05132 Salmonella infection
118821638 (nfkb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmao03000
]
118821638 (nfkb1)
Transcription factors [BR:
cmao03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
118821638 (nfkb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
118821638
NCBI-ProteinID:
XP_036446238
LinkDB
All DBs
Position
Unknown
AA seq
955 aa
AA seq
DB search
MTEEDPYLAHQEFLDFGQPWIHAVDPHFPPIPHTNTPRIDGPCLQIIEQPKQRGFRFRYG
CEGPSHGGLPGASSEKNRKTYPQVKICNYQGPARVVVQLVTNTKQPHLHAHSLVGKQCEK
GVCIADLQPKDSCISFPNLGILHVTKKNVTKTLEERMSEAYRQGYNYGVAIHQEIDSFQG
ETRIPRELSDHHRSLINMAASHQAKDMDLSVVRLMFTAFLPDGEGGFTRRLDPVISEPIY
DSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDETGISWEAFGDF
SPTDVHRQFAIVFKTPKYRDQNLQKPISVFVQLKRKSDNETSEPKPFTYHPQIIDKEEVQ
RKRQKTLPSFPDYGGPGGGAGGMYRGAGGGPTTGGGHSGAGGGGHYYQGYSNFNNYNSGY
GFPPSMGGGGTGIKHATHGPVEDTDEDSDSDLDDDPGSGGRVRVRVQPQSTGARSEEGED
LEELTSDETEAADCVFDLQLAKVAHRHACALFDYAVSGDTRRLLVPQRPLLATQDENGDT
GLHLGVIHSQTDAVKNLAHVISAVPGEDALNMRNDLYQTPLHLAVVTQQKEAAEALLAAG
ADVTLTDRHGNTALHLAAKLKEGEMVRLLLHHKAVLQLTSVPNTAGLCPLHLAVLANSLS
SVRALLEGGASAEVQERTCGRTPLHLATEHDNVSLAGCLLLEGDAEVDSVTYNGSTPLHI
AAGRGSLKLSALLVAAGADPHKENYEPLFFRDEDCCALDEEDQEDEGYIPGTTPFNMAAS
PEVREILNGKEYQPSTVFVPPQGDMRSLSAETKQALCQCLEESPGGWESLAHALGLGILT
NAFRLSPRPASTLLDSYEVSGGTVRELFAGLKSIGNSGAVSILQEHYVCEENDDTSASDR
AALSEGHQGLKLAPLDETGMCDSGVETSFHRPSLSLVDSLCGQLDPQLAAALAEV
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagaggatccttatcttgcgcatcaagagttcttagactttgggcaaccatgg
attcacgcagtggacccacatttcccacctattccacacacaaacacaccaagaatagat
ggaccttgtctccaaattatagaacaaccaaaacagcgaggcttcaggtttcgttatggc
tgtgaaggcccttcccatggtggactcccgggagcctccagtgagaagaacaggaagacg
taccctcaggtcaagatctgtaattatcaaggtccagcgcgggttgtggtccagcttgtg
accaacaccaaacagccccatctgcacgcgcacagcctggtgggcaagcagtgtgagaag
ggcgtctgcatcgccgatctccagcccaaagactcctgcatcagttttcctaacttgggt
atcttgcacgtgactaagaagaatgtgactaagaccctggaggagaggatgagtgaggcc
tacaggcaaggctataattacggagtagccattcaccaggaaattgactctttccaagga
gaaacacgcatccccagggagctctcagaccatcacaggagtctgatcaacatggctgcg
agccaccaggccaaagacatggacctgagcgtggtcaggctcatgtttacagcttttctg
ccggatggggaggggggcttcacccggaggctggaccctgtcatatctgagccaatctac
gacagcaaggccccaaatgcctcgaatctgaagattgtgcggatggatcgaacggcgggc
tgtgtgacagggggagaggaggtctacctgctgtgtgataaagtccagaaagatgacatc
caggtacgcttttatgaggatgatgaaacgggcatctcctgggaggcgtttggggacttt
tctccgactgacgtccacaggcagtttgccatcgtcttcaagacacccaagtatcgggac
cagaatctgcagaaacccatctcagtgttcgtgcagctcaagaggaaatcagacaatgag
acaagcgagcccaagccgttcacttaccacccgcagatcatagataaggaggaggttcag
agaaagaggcagaagacgctgcccagtttcccagactacgggggcccagggggtggagct
gggggcatgtacagaggagcaggaggtggtcctacaacaggaggtggccacagtggagca
ggaggcggaggtcactactaccagggctattcaaattttaacaactataactctggctac
ggcttccctccctccatgggtgggggaggcaccggcatcaagcacgctactcatggccct
gtggaagacactgatgaggacagtgacagtgatctagatgatgatccaggctcaggggga
agggtcagagtgcgtgtccagccgcaatccacaggagcgaggagtgaggagggtgaggat
ttagaggagctcacgtctgatgagacagaagctgcagactgtgttttcgatctgcagttg
gccaaggtggcacacagacatgcctgtgctctgtttgactatgcagtgagcggcgatact
cgcaggctgctggttccacagcgacccctattggccactcaggatgaaaacggagacacg
ggactgcacttgggtgtgatccacagtcaaacagatgcagtgaagaatttagcccatgtt
atttcggctgttcctggagaagatgctcttaacatgaggaatgacttgtatcagacacct
ttgcacctggcggtggtgactcagcagaaagaggcggcagaggctttgcttgcggctgga
gcagatgtcactctgactgatcgccatggcaacacagcattgcacttggcagccaagctg
aaagagggagagatggttcgattgcttttgcaccacaaagctgtgctgcagttaaccagc
gtaccaaacacagcaggtctgtgtccactgcacctggccgttctggccaacagtctgagc
agtgttagggcgctgctggagggtggggcgagtgcggaggttcaggagcgcacctgcggc
cgcacgccgcttcacctggcgaccgagcacgacaacgtgtcactcgcaggctgcctacta
ttggagggtgatgctgaagtggacagcgtcacctataatggctccacccctcttcatatc
gcagcaggacggggctcactcaagctgagcgcactcctcgtggccgcaggtgcggaccct
cataaagagaactatgagccactgttcttcagagatgaggactgctgcgccttggatgag
gaagatcaggaggatgagggctacatccctgggactaccccattcaacatggctgcatcc
ccagaggttcgagaaatcttaaatggtaaagagtaccagcccagcactgtctttgtacca
ccacaaggagacatgcgtagtctgagtgcggaaacgaagcaagcgctgtgtcagtgtctg
gaggagtcgccgggtgggtgggagagtctggcacacgcactgggactcggcatcctcacc
aacgctttccgcctcagcccacggcccgcctccacgctactggatagctatgaggtttca
ggtggaacggttcgagaactcttcgcaggcttgaagagtattggcaacagcggcgctgtc
agcatactgcaggagcactatgtgtgtgaggaaaatgacgacacatcagcctctgataga
gcagcactctccgagggtcatcaggggctgaagctggcaccgttggatgagactggcatg
tgcgacagtggtgtagagacgtccttccacaggcccagcctcagcctggtcgactcgctc
tgcggacagctggacccacagttggctgccgctctggccgaagtttga
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