Colossoma macropomum (tambaqui): 118827176
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Entry
118827176 CDS
T09004
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
cmao
Colossoma macropomum (tambaqui)
Pathway
cmao04020
Calcium signaling pathway
cmao04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cmao00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
118827176 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118827176 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cmao04040
]
118827176 (grin1b)
Ion channels [BR:
cmao04040
]
Ligand-gated channels
Glutamate (ionotropic)
118827176 (grin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
NYN
DUF3663
Motif
Other DBs
NCBI-GeneID:
118827176
NCBI-ProteinID:
XP_036454320
LinkDB
All DBs
Position
Unknown
AA seq
919 aa
AA seq
DB search
MRLVLFAFLVSCSCARGGCEPKIVNIGAVLSQKRYEQVFKDAVSQANNIYGRDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEERETKSKNRNYENLDQLSYDNKRGPKAEKVLLFSQDTNLTALLQEAKELEARVIILSA
SEDEAAAIYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIYD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRRFAHYSILNYQKTRLVQVGVYNGSQVVMNTQRKIIWPGGETEKPRGYQMSTRLKIVT
IHQEPFVYVKPTLRDGTCKEEYTVNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLATTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDGKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKASFRSIS
TNLASNIKRRRSSKDTVRR
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggttctcttcgcattcctcgtctcgtgctcgtgcgcgcggggcggctgcgag
cccaagatcgtcaacatcggcgcggtgctgagccagaagcgctacgagcaggtgttcaag
gacgcggtcagccaggccaacaacatctacggcagagacaagttcaaaatgaacgcgatc
tcagtcacccacaagcccaacgccatccagatggcactgtccgtgtgcgaggacctcatc
tccaaccaggtttatgcgattttggtgagtcatccgcctcagtccaacgaccacctgacc
cccaccccggtgtcctacacagccggattctaccgcatcccagtggtgggactgaccacg
cgcatgtccatctattcagacaagagtatccatctctctttcctgcgcaccgtgcctccc
tactctcaccaggcccaggtctggttcgacatgatgcgcgagttccgctggaaccacatc
atactgatcgtcagcgacgaccacgagggccgcgcggcccagaagaggctcgagaccctg
ctggaggagagggagacgaagagtaaaaacaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacccaaggcagagaaagtgctcctgttcagccaagacacaaat
ctgactgctctgctccaggaggccaaggagctggaggccagagtcatcatcctgtctgcc
agtgaagacgaagctgcggccatttacaaagcagcgcgccagctcaatatgacaggctct
ggttacgtgtggctggtcggagaaagggagatgtctggtaaagcactgagtgaagctcca
gatggcttgctcggcctccagctaatcaatggcaagaatgagtccgcgcacatctacgat
gcggtggcagtggtggcccagtccattcaggagctctttgagaaggagaatatcacagag
cctcctcgaggctgcgtgggcaatacaaacatctggaagactggcccgctcttcaaacga
gtgctgatgtcatccaagtatccagatggcctaacaggccgcgtggagtttaatgacgac
ggggacaggaggttcgcccactatagcatcctcaactaccagaagactcggctggtccaa
gtgggcgtctacaatggctcacaagttgtgatgaacactcagaggaagatcatttggcca
ggaggagaaactgagaagccaagaggctatcagatgtcaacaagattgaagattgtcacc
attcatcaagagccctttgtgtatgtgaaaccgaccctgcgagacggaacatgcaaggag
gaatacactgtgaatggagtcctgatcaaaaaagtgatctgcactggcccgaatgagacc
attccaggtcggcccatagtgcctcagtgttgctatgggttctgcattgaccttctgatc
aagcttgcgacgacaatgaacttcacctacgaagtgcatctagtagctgatggcaaattt
ggcactcaggagcgtgtgaataacagcaacaagaaggagtggaatggcatgatgggagag
ctcctgggtggcctggcagacatgatcgtggctccactcactatcaacaatgaacgagcc
cagtatatagagttctccaaaccgttcaagtaccaagggctcaccatccttgtcaaaaag
gaaataccacgcagtacgctggactcgttcatgcagccctttcagagcactctgtggtta
ctggtgggtctatcggtccatgttgtggcggtgatgctctacctattagaccgtttcagc
ccgtttggaagatttaaagtgaatagtgaagaagaagaagaagatgccctcaccttatcc
tctgctatgtggttctcctggggtgtactactgaactccggtattggagaaggtgcccca
cggagcttttcagcgaggattttaggtatggtgtgggcaggttttgctatgattatagtt
gcatcttatactgccaatttggcagccttcctagtgctggatcggcctgaggagcgcatt
accggcatcaacgaccctaggctgcgaaacccatcagacaagttcatctacgccacagtc
aagcagagctctgtggacatttacttccgccgtcaagttgagctgagcaccatgtaccgc
cacatggaaaagcacaactatgaaagcgccgcggaagccatccaggctgtgcgagacggc
aaactccacgcttttatctgggattcagccgtgttggagtttgaagcctcgcaaaagtgt
gacctggtcactacaggagagctgttcttccgctcggggttcggaattggcatgcgtaaa
gacagcccatggaagcaaaatgtttccctggccattctcagttcccatgagaatggcttc
atggaggacctggataaaacctgggtgagataccaggagtgtgactccaggagcaatgcc
ccagccacgcttacctttgagaatatggcaggcgtgtttatgttggtggctggtggcatc
gtcgccgggatcttcctcatcttcatcgagatcgcgtacaagcgtcacaaagacgctcgt
agaaagcagatgcagctggcctttgcggcagttaatgtttggaggaagaacctacaggat
aggaaaagtggtagagcagagcccgaccccaaaaagaaagcctcttttaggtccatcagt
accaacctggcctccaacatcaagagacgtaggtcctccaaagacacggtaaggagatga
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